Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0019700 | OGI:04076620 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:25122613-25124340 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctaacatgggttatttttctttagtgacaattttgttctttcccctactctaacaccacaaaatcttccccttgagttgtgattcttactatgaacatactacgtccaaaccgagataaatatacacgtctaacagaatatctaaaccgagagaaatcagaaattagaaagagaattcacatcaacattgacacgggtggttttcgcgctgcaccaatcacgaagcacccaagcacgaatctcggagcgccgatgcctcaacgcatctgagaaaccgttccaagctcgccgccgacgacccggccggaccctcccacgccgccgccatcgcgcgcgcgatctcccccgccttcctcctcatcgcctcgcccttctccgtctcccccatcaccgcccccacggcctcggccacctccccactctccaccgccgagctctccaggttcccgcgcgccacctccacgcacaccccccactccaccaccaccatcgcgttgaagaactgctcggcccccaccggccacccgagcagcggcacgccgtggcggaggctctcgaggatggagttccacccgcagtgggtcaggaacgcgcccgtggacgggtgcgccaggatccgcgcctgcggcgcccacccgcgcaccaccagccccctgcctgcgcgcgccatccggtcctcgaatccggcggggagccacccgggatcgaatccgtccttggggtcgaaccccaccggcggccggacggcccagacgaacggccgcccgctcgcctccagccccagcgccagctccgccatctgacggatgctgatgctgttctgcgacccgaacgagatgtacagcaccgagcgccgcgggtgcgcgtccagccaccggatgatgctggtgtcgtcgtcgtcctgcgatttcgaaggatccggcgccgcgaggatcggcccgatcgcccatgtctggacgccgaagctcgctctgagcatgtctagcccggaggtctccagttcctggatggtgttgacgagcacggcgtcggtcttgcggcagcacgggatgacccgccggaagaaggccgtccaggggtccgcccccgtcgcggcgagcatgtactgcgggatctgggtgcggtggaggacgacgtcggggaagtcgggcagcagcgggaactcgtcgccgccggccgtgagggtgtgcgggaggtgctcccacacggagaagaagacggcgtggccgaaggcgcctccggggaggaacacggcgtgggacgcgccccgcgcgcgcgcgacgtcggccgtccacgcgaagaaggagtcggcgatgacgcagacggggggccggatgccagcgacgaagccatcgaaggccgggcggagggactcggaggcccggaagagggtgatgaactggtggacgtggaggtcggcgagggactcggcgccgtcgggcagaccgtggtcggcgggcgcgaaggggagcgcgtggagccggatcggaggggaggtggccgggagggagagggagccgaggaggcgtggggtggagacgagcgtgacggcgaggcccgggcggagcgtctggaggtggccggcgaggcggaggaaggccgggatgtggccgtgcgcgaggaaggggaagagcacgacgtgcgggctcctcgcctcctctccctctgccgccatggtgaggtgatgatggggacggggtgttcggtacttcggtggaagtggacgct
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| CDS seq | atggcggcagagggagaggaggcgaggagcccgcacgtcgtgctcttccccttcctcgcgcacggccacatcccggccttcctccgcctcgccggccacctccagacgctccgcccgggcctcgccgtcacgctcgtctccaccccacgcctcctcggctccctctccctcccggccacctcccctccgatccggctccacgcgctccccttcgcgcccgccgaccacggtctgcccgacggcgccgagtccctcgccgacctccacgtccaccagttcatcaccctcttccgggcctccgagtccctccgcccggccttcgatggcttcgtcgctggcatccggccccccgtctgcgtcatcgccgactccttcttcgcgtggacggccgacgtcgcgcgcgcgcggggcgcgtcccacgccgtgttcctccccggaggcgccttcggccacgccgtcttcttctccgtgtgggagcacctcccgcacaccctcacggccggcggcgacgagttcccgctgctgcccgacttccccgacgtcgtcctccaccgcacccagatcccgcagtacatgctcgccgcgacgggggcggacccctggacggccttcttccggcgggtcatcccgtgctgccgcaagaccgacgccgtgctcgtcaacaccatccaggaactggagacctccgggctagacatgctcagagcgagcttcggcgtccagacatgggcgatcgggccgatcctcgcggcgccggatccttcgaaatcgcaggacgacgacgacaccagcatcatccggtggctggacgcgcacccgcggcgctcggtgctgtacatctcgttcgggtcgcagaacagcatcagcatccgtcagatggcggagctggcgctggggctggaggcgagcgggcggccgttcgtctgggccgtccggccgccggtggggttcgaccccaaggacggattcgatcccgggtggctccccgccggattcgaggaccggatggcgcgcgcaggcagggggctggtggtgcgcgggtgggcgccgcaggcgcggatcctggcgcacccgtccacgggcgcgttcctgacccactgcgggtggaactccatcctcgagagcctccgccacggcgtgccgctgctcgggtggccggtgggggccgagcagttcttcaacgcgatggtggtggtggagtggggggtgtgcgtggaggtggcgcgcgggaacctggagagctcggcggtggagagtggggaggtggccgaggccgtgggggcggtgatgggggagacggagaagggcgaggcgatgaggaggaaggcgggggagatcgcgcgcgcgatggcggcggcgtgggagggtccggccgggtcgtcggcggcgagcttggaacggtttctcagatgcgttgaggcatcggcgctccgagattcgtgcttgggtgcttcgtga
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| Protein seq | MAAEGEEARSPHVVLFPFLAHGHIPAFLRLAGHLQTLRPGLAVTLVSTPRLLGSLSLPATSPPIRLHALPFAPADHGLPDGAESLADLHVHQFITLFRASESLRPAFDGFVAGIRPPVCVIADSFFAWTADVARARGASHAVFLPGGAFGHAVFFSVWEHLPHTLTAGGDEFPLLPDFPDVVLHRTQIPQYMLAATGADPWTAFFRRVIPCCRKTDAVLVNTIQELETSGLDMLRASFGVQTWAIGPILAAPDPSKSQDDDDTSIIRWLDAHPRRSVLYISFGSQNSISIRQMAELALGLEASGRPFVWAVRPPVGFDPKDGFDPGWLPAGFEDRMARAGRGLVVRGWAPQARILAHPSTGAFLTHCGWNSILESLRHGVPLLGWPVGAEQFFNAMVVVEWGVCVEVARGNLESSAVESGEVAEAVGAVMGETEKGEAMRRKAGEIARAMAAAWEGPAGSSAASLERFLRCVEASALRDSCLGAS |
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| Function | UDP-glycosyltransferase 92A1 [UniProtKB/Swiss-Prot:Q9LXV0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0019700 | OsCMeo_04g0019700.01 | Chr04 | 25122613 | 25124340 | - | NAM | ||
| CDS seq | atggcggcagagggagaggaggcgaggagcccgcacgtcgtgctcttccccttcctcgcgcacggccacatcccggccttcctccgcctcgccggccacctccagacgctccgcccgggcctcgccgtcacgctcgtctccaccccacgcctcctcggctccctctccctcccggccacctcccctccgatccggctccacgcgctccccttcgcgcccgccgaccacggtctgcccgacggcgccgagtccctcgccgacctccacgtccaccagttcatcaccctcttccgggcctccgagtccctccgcccggccttcgatggcttcgtcgctggcatccggccccccgtctgcgtcatcgccgactccttcttcgcgtggacggccgacgtcgcgcgcgcgcggggcgcgtcccacgccgtgttcctccccggaggcgccttcggccacgccgtcttcttctccgtgtgggagcacctcccgcacaccctcacggccggcggcgacgagttcccgctgctgcccgacttccccgacgtcgtcctccaccgcacccagatcccgcagtacatgctcgccgcgacgggggcggacccctggacggccttcttccggcgggtcatcccgtgctgccgcaagaccgacgccgtgctcgtcaacaccatccaggaactggagacctccgggctagacatgctcagagcgagcttcggcgtccagacatgggcgatcgggccgatcctcgcggcgccggatccttcgaaatcgcaggacgacgacgacaccagcatcatccggtggctggacgcgcacccgcggcgctcggtgctgtacatctcgttcgggtcgcagaacagcatcagcatccgtcagatggcggagctggcgctggggctggaggcgagcgggcggccgttcgtctgggccgtccggccgccggtggggttcgaccccaaggacggattcgatcccgggtggctccccgccggattcgaggaccggatggcgcgcgcaggcagggggctggtggtgcgcgggtgggcgccgcaggcgcggatcctggcgcacccgtccacgggcgcgttcctgacccactgcgggtggaactccatcctcgagagcctccgccacggcgtgccgctgctcgggtggccggtgggggccgagcagttcttcaacgcgatggtggtggtggagtggggggtgtgcgtggaggtggcgcgcgggaacctggagagctcggcggtggagagtggggaggtggccgaggccgtgggggcggtgatgggggagacggagaagggcgaggcgatgaggaggaaggcgggggagatcgcgcgcgcgatggcggcggcgtgggagggtccggccgggtcgtcggcggcgagcttggaacggtttctcagatgcgttgaggcatcggcgctccgagattcgtgcttgggtgcttcgtga
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| Protein seq | MAAEGEEARSPHVVLFPFLAHGHIPAFLRLAGHLQTLRPGLAVTLVSTPRLLGSLSLPATSPPIRLHALPFAPADHGLPDGAESLADLHVHQFITLFRASESLRPAFDGFVAGIRPPVCVIADSFFAWTADVARARGASHAVFLPGGAFGHAVFFSVWEHLPHTLTAGGDEFPLLPDFPDVVLHRTQIPQYMLAATGADPWTAFFRRVIPCCRKTDAVLVNTIQELETSGLDMLRASFGVQTWAIGPILAAPDPSKSQDDDDTSIIRWLDAHPRRSVLYISFGSQNSISIRQMAELALGLEASGRPFVWAVRPPVGFDPKDGFDPGWLPAGFEDRMARAGRGLVVRGWAPQARILAHPSTGAFLTHCGWNSILESLRHGVPLLGWPVGAEQFFNAMVVVEWGVCVEVARGNLESSAVESGEVAEAVGAVMGETEKGEAMRRKAGEIARAMAAAWEGPAGSSAASLERFLRCVEASALRDSCLGAS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.529133 | 0.730791 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0506000 | RBH | 0.382963 | 0.141266 | 0.890639 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g42690 | RBH | 0.265341 | 0.090320 | 0.218527 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0506000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0019200 | RBH | 0.109940 | 3.027138 | 1.522762 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0019980 | RBH | 0.144502 | 1.867026 | 0.737910 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026220 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0019420 | RBH | 0.0 | 0.034136 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0019620 | RBH | 0.0 | 6.755914 | 1.960954 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0396300 | RBH | 1.749018 | 7.732836 | 0.900396 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0018430 | RBH | 0.0 | 0.125710 | 0.212550 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0396300 | RBH | 1.655183 | 5.016364 | 2.644598 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0018910 | RBH | 0.095885 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0018760 | RBH | 0.105556 | 6.975777 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0018880 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0019250 | RBH | 0.0 | 0.270358 | 0.266005 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0019420 | RBH | 0.0 | 6.377159 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G018710 | RBH | 0.000000 | 0.0 | 1.129420 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0018650 | RBH | 0.0 | 0.0 | 1.346155 |
