Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0017380 | OGI:04072350 | 13/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:23639400-23641784 | ||||||||
| Gene Symbol | SDRLK-61 | ||||||||||
| DNA seq | atgatggaacctctcctcaccctcctcgtcctcctcctagtgttcacaatagctccctctaaagctcgaaacatcaccctgggctcgttgctgaccaccgaaggcgtgaacacatcgtggatttcaccctccggtgattttgcattcggcttccaactcatcagcaccaacacttacctccttgccgtctggttcgacaagactgtcaacaaaagcatggcatggtacgctaagaccaacacacaagtaccagaggtagtattggtgccttctggttctcgacttcagcttagctctaatggtctgtcactccttgaccctggtggccatgagctttggaacccccaagtccctggtgcagcttatgccaacatgcttgatactggaaattttgtgcttcttggtgcagatggctctacaaagtggggaacctttgatagcccagcggacaccatcctgcccacacaagggccattttctgaagttcaactctacagtaggctgacacaagcagactactctaatggccgatttctacttcaagtgaaagatggaaaccttgaatttgatctagttgctgttccctcaggaaacaagtatcgttcatacttgacccccaacactggtggaaatggctcacagcttctgttcaatgaaactggaggggtctacttcaccttgaaggatggcactgaaattactatcacatctaccatcatgggttcaatggtgaactactaccagcgtgcaaccctagacccagatggtgtgttccgtcaatatgtgtacccaaagaaggaggcagtaaccagagggtggaagtacataggttggactgctgtggacttcatccccaggaacatatgtgatgtcttcactacctcagatggaagtggtgcatgcgggttcaacagctattgcagcttcaactggaaccagaacgagacagtggaatgccaatgtccaccacattactcgttcatagatgaggcacggaagtacaaaggatgcaaagcaaacttccaacaacaaagctgtgatttggatgaggcaaccatgattgatgaatttgatttgatcccaatgaaaggcatagattggccaagtgcagactatgagtcattcacctctgttggcatggatgactgccagaaactatgcttgacagattgcttctgtgctgtgacagtgtttaatgaaggaaattgttggaagaagaaactccccatgtccaatggaagaatggacagtagtgttgatagaacactttatctgaaggtgcccaagaacaacaattccctgtctattattaatactggctccatcaaatggaagaaagacaagaagtattggatcctcggtagttgtctcctccttggaagcttcttgttggtgttgatcctccttatctcatttatcctttttggacactattttgcaaagaaaagcaagaagatagatccaccaaagcaatcatatagtaccgggggacttcctttgaaatctttcacttatgaagagcttcacgaggcaacaggtgggttctgtgaagaaattggtagcggtggttctggggtagtctacaaggggacactacaagatcagcttggcacacacattgcagtaaagaagatcaataaggtcttgccagatattgaaaaggagtttgctgtggaagttcagaccattggatggacatttcacaaaaacctggtcaggttactggggttctgcaatgaaggtgctaagagattacttgtttatgagttcatgccaaacgggccacttaatgaattcattttctgcaccatcagaccatcttggtaccaacgaggactgctctacttgcatgaggaatgcagcacacagatcatccactgtgacataaagcctcaaaatatccttcttgacaacaacctcacggcaaaaatatccgactttggtttagcaaagctgctgcagatggaccaaacacaaacaacaactggtatccggggaactcgagggtatgttgcacctgagtggtttaagaacattgctgtcaccgccaaagtggatgtctacagttttggggtgatcctactagagattgtatgttgcaggcgtaatgtggagcaagacataattgatgaggacagagccatacttactgactgggcaaatgactgttatcgctctggaagaattgatttactggtggagggtgatgaggaggcatcatttgacattaagagggtacagaggtttttggcagtagcactttggtgcatccaagaggacccagccatgcgacctaccatgcataaggtgacccaaatgcttgacggtgctgttgagatcgcggtgcctcctgatcctgcatcatatatcagttcactacagtaa
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| CDS seq | atggaacctctcctcaccctcctcgtcctcctcctagtgttcacaatagctccctctaaagctcgaaacatcaccctgggctcgttgctgaccaccgaaggcgtgaacacatcgtggatttcaccctccggtgattttgcattcggcttccaactcatcagcaccaacacttacctccttgccgtctggttcgacaagactgtcaacaaaagcatggcatggtacgctaagaccaacacacaagtaccagaggtagtattggtgccttctggttctcgacttcagcttagctctaatggtctgtcactccttgaccctggtggccatgagctttggaacccccaagtccctggtgcagcttatgccaacatgcttgatactggaaattttgtgcttcttggtgcagatggctctacaaagtggggaacctttgatagcccagcggacaccatcctgcccacacaagggccattttctgaagttcaactctacagtaggctgacacaagcagactactctaatggccgatttctacttcaagtgaaagatggaaaccttgaatttgatctagttgctgttccctcaggaaacaagtatcgttcatacttgacccccaacactggtggaaatggctcacagcttctgttcaatgaaactggaggggtctacttcaccttgaaggatggcactgaaattactatcacatctaccatcatgggttcaatggtgaactactaccagcgtgcaaccctagacccagatggtgtgttccgtcaatatgtgtacccaaagaaggaggcagtaaccagagggtggaagtacataggttggactgctgtggacttcatccccaggaacatatgtgatgtcttcactacctcagatggaagtggtgcatgcgggttcaacagctattgcagcttcaactggaaccagaacgagacagtggaatgccaatgtccaccacattactcgttcatagatgaggcacggaagtacaaaggatgcaaagcaaacttccaacaacaaagctgtgatttggatgaggcaaccatgattgatgaatttgatttgatcccaatgaaaggcatagattggccaagtgcagactatgagtcattcacctctgttggcatggatgactgccagaaactatgcttgacagattgcttctgtgctgtgacagtgtttaatgaaggaaattgttggaagaagaaactccccatgtccaatggaagaatggacagtagtgttgatagaacactttatctgaaggtgcccaagaacaacaattccctgtctattattaatactggctccatcaaatggaagaaagacaagaagtattggatcctcggtagttgtctcctccttggaagcttcttgttggtgttgatcctccttatctcatttatcctttttggacactattttgcaaagaaaagcaagaagatagatccaccaaagcaatcatatagtaccgggggacttcctttgaaatctttcacttatgaagagcttcacgaggcaacaggtgggttctgtgaagaaattggtagcggtggttctggggtagtctacaaggggacactacaagatcagcttggcacacacattgcagtaaagaagatcaataaggtcttgccagatattgaaaaggagtttgctgtggaagttcagaccattggatggacatttcacaaaaacctggtcaggttactggggttctgcaatgaaggtgctaagagattacttgtttatgagttcatgccaaacgggccacttaatgaattcattttctgcaccatcagaccatcttggtaccaacgaggactgctctacttgcatgaggaatgcagcacacagatcatccactgtgacataaagcctcaaaatatccttcttgacaacaacctcacggcaaaaatatccgactttggtttagcaaagctgctgcagatggaccaaacacaaacaacaactggtatccggggaactcgagggtatgttgcacctgagtggtttaagaacattgctgtcaccgccaaagtggatgtctacagttttggggtgatcctactagagattgtatgttgcaggcgtaatgtggagcaagacataattgatgaggacagagccatacttactgactgggcaaatgactgttatcgctctggaagaattgatttactggtggagggtgatgaggaggcatcatttgacattaagagggtacagaggtttttggcagtagcactttggtgcatccaagaggacccagccatgcgacctaccatgcataaggtgacccaaatgcttgacggtgctgttgagatcgcggtgcctcctgatcctgcatcatatatcagttcactacagtaa
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| Protein seq | MEPLLTLLVLLLVFTIAPSKARNITLGSLLTTEGVNTSWISPSGDFAFGFQLISTNTYLLAVWFDKTVNKSMAWYAKTNTQVPEVVLVPSGSRLQLSSNGLSLLDPGGHELWNPQVPGAAYANMLDTGNFVLLGADGSTKWGTFDSPADTILPTQGPFSEVQLYSRLTQADYSNGRFLLQVKDGNLEFDLVAVPSGNKYRSYLTPNTGGNGSQLLFNETGGVYFTLKDGTEITITSTIMGSMVNYYQRATLDPDGVFRQYVYPKKEAVTRGWKYIGWTAVDFIPRNICDVFTTSDGSGACGFNSYCSFNWNQNETVECQCPPHYSFIDEARKYKGCKANFQQQSCDLDEATMIDEFDLIPMKGIDWPSADYESFTSVGMDDCQKLCLTDCFCAVTVFNEGNCWKKKLPMSNGRMDSSVDRTLYLKVPKNNNSLSIINTGSIKWKKDKKYWILGSCLLLGSFLLVLILLISFILFGHYFAKKSKKIDPPKQSYSTGGLPLKSFTYEELHEATGGFCEEIGSGGSGVVYKGTLQDQLGTHIAVKKINKVLPDIEKEFAVEVQTIGWTFHKNLVRLLGFCNEGAKRLLVYEFMPNGPLNEFIFCTIRPSWYQRGLLYLHEECSTQIIHCDIKPQNILLDNNLTAKISDFGLAKLLQMDQTQTTTGIRGTRGYVAPEWFKNIAVTAKVDVYSFGVILLEIVCCRRNVEQDIIDEDRAILTDWANDCYRSGRIDLLVEGDEEASFDIKRVQRFLAVALWCIQEDPAMRPTMHKVTQMLDGAVEIAVPPDPASYISSLQ |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 [UniProtKB/Swiss-Prot:A0A075F7E9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0017380 | OsCMeo_04g0017380.01 | Chr04 | 23639400 | 23641784 | + | NAM | ||
| CDS seq | atggaacctctcctcaccctcctcgtcctcctcctagtgttcacaatagctccctctaaagctcgaaacatcaccctgggctcgttgctgaccaccgaaggcgtgaacacatcgtggatttcaccctccggtgattttgcattcggcttccaactcatcagcaccaacacttacctccttgccgtctggttcgacaagactgtcaacaaaagcatggcatggtacgctaagaccaacacacaagtaccagaggtagtattggtgccttctggttctcgacttcagcttagctctaatggtctgtcactccttgaccctggtggccatgagctttggaacccccaagtccctggtgcagcttatgccaacatgcttgatactggaaattttgtgcttcttggtgcagatggctctacaaagtggggaacctttgatagcccagcggacaccatcctgcccacacaagggccattttctgaagttcaactctacagtaggctgacacaagcagactactctaatggccgatttctacttcaagtgaaagatggaaaccttgaatttgatctagttgctgttccctcaggaaacaagtatcgttcatacttgacccccaacactggtggaaatggctcacagcttctgttcaatgaaactggaggggtctacttcaccttgaaggatggcactgaaattactatcacatctaccatcatgggttcaatggtgaactactaccagcgtgcaaccctagacccagatggtgtgttccgtcaatatgtgtacccaaagaaggaggcagtaaccagagggtggaagtacataggttggactgctgtggacttcatccccaggaacatatgtgatgtcttcactacctcagatggaagtggtgcatgcgggttcaacagctattgcagcttcaactggaaccagaacgagacagtggaatgccaatgtccaccacattactcgttcatagatgaggcacggaagtacaaaggatgcaaagcaaacttccaacaacaaagctgtgatttggatgaggcaaccatgattgatgaatttgatttgatcccaatgaaaggcatagattggccaagtgcagactatgagtcattcacctctgttggcatggatgactgccagaaactatgcttgacagattgcttctgtgctgtgacagtgtttaatgaaggaaattgttggaagaagaaactccccatgtccaatggaagaatggacagtagtgttgatagaacactttatctgaaggtgcccaagaacaacaattccctgtctattattaatactggctccatcaaatggaagaaagacaagaagtattggatcctcggtagttgtctcctccttggaagcttcttgttggtgttgatcctccttatctcatttatcctttttggacactattttgcaaagaaaagcaagaagatagatccaccaaagcaatcatatagtaccgggggacttcctttgaaatctttcacttatgaagagcttcacgaggcaacaggtgggttctgtgaagaaattggtagcggtggttctggggtagtctacaaggggacactacaagatcagcttggcacacacattgcagtaaagaagatcaataaggtcttgccagatattgaaaaggagtttgctgtggaagttcagaccattggatggacatttcacaaaaacctggtcaggttactggggttctgcaatgaaggtgctaagagattacttgtttatgagttcatgccaaacgggccacttaatgaattcattttctgcaccatcagaccatcttggtaccaacgaggactgctctacttgcatgaggaatgcagcacacagatcatccactgtgacataaagcctcaaaatatccttcttgacaacaacctcacggcaaaaatatccgactttggtttagcaaagctgctgcagatggaccaaacacaaacaacaactggtatccggggaactcgagggtatgttgcacctgagtggtttaagaacattgctgtcaccgccaaagtggatgtctacagttttggggtgatcctactagagattgtatgttgcaggcgtaatgtggagcaagacataattgatgaggacagagccatacttactgactgggcaaatgactgttatcgctctggaagaattgatttactggtggagggtgatgaggaggcatcatttgacattaagagggtacagaggtttttggcagtagcactttggtgcatccaagaggacccagccatgcgacctaccatgcataaggtgacccaaatgcttgacggtgctgttgagatcgcggtgcctcctgatcctgcatcatatatcagttcactacagtaa
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| Protein seq | MEPLLTLLVLLLVFTIAPSKARNITLGSLLTTEGVNTSWISPSGDFAFGFQLISTNTYLLAVWFDKTVNKSMAWYAKTNTQVPEVVLVPSGSRLQLSSNGLSLLDPGGHELWNPQVPGAAYANMLDTGNFVLLGADGSTKWGTFDSPADTILPTQGPFSEVQLYSRLTQADYSNGRFLLQVKDGNLEFDLVAVPSGNKYRSYLTPNTGGNGSQLLFNETGGVYFTLKDGTEITITSTIMGSMVNYYQRATLDPDGVFRQYVYPKKEAVTRGWKYIGWTAVDFIPRNICDVFTTSDGSGACGFNSYCSFNWNQNETVECQCPPHYSFIDEARKYKGCKANFQQQSCDLDEATMIDEFDLIPMKGIDWPSADYESFTSVGMDDCQKLCLTDCFCAVTVFNEGNCWKKKLPMSNGRMDSSVDRTLYLKVPKNNNSLSIINTGSIKWKKDKKYWILGSCLLLGSFLLVLILLISFILFGHYFAKKSKKIDPPKQSYSTGGLPLKSFTYEELHEATGGFCEEIGSGGSGVVYKGTLQDQLGTHIAVKKINKVLPDIEKEFAVEVQTIGWTFHKNLVRLLGFCNEGAKRLLVYEFMPNGPLNEFIFCTIRPSWYQRGLLYLHEECSTQIIHCDIKPQNILLDNNLTAKISDFGLAKLLQMDQTQTTTGIRGTRGYVAPEWFKNIAVTAKVDVYSFGVILLEIVCCRRNVEQDIIDEDRAILTDWANDCYRSGRIDLLVEGDEEASFDIKRVQRFLAVALWCIQEDPAMRPTMHKVTQMLDGAVEIAVPPDPASYISSLQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.176582 | 0.934787 | 2.764142 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0475100 | RBH | 0.257564 | 0.925602 | 1.155706 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g39910 | RBH | 0.659246 | 0.638973 | 0.297501 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0475100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0016880 | RBH | 0.158781 | 2.940116 | 2.107950 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0017670 | RBH | 0.161235 | 1.985769 | 1.252653 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0017390 | SBH | 0.875200 | 0.0 | 0.049206 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0017090 | RBH | 0.119505 | 0.197695 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0017340 | RBH | 5.802049 | 4.594939 | 2.525239 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0370500 | RBH | 1.9179375 | 8.9849 | 6.663981 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0016130 | SBH | 0.258361 | 0.000000 | 0.143186 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0368900 | SBH | 2.3085665 | 0.8581065 | 4.6280865 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0016690 | RBH | 0.127672 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0016550 | SBH | 0.969604 | 3.361715 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0016570 | RBH | 10.240043 | 2.320570 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0017060 | RBH | 0.674514 | 0.312431 | 0.837115 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0017150 | RBH | 0.000000 | 0.568924 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G016380 | RBH | 0.262732 | 2.007871 | 1.266118 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0016400 | RBH | 0.000000 | 0.000000 | 0.991321 |
