Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_03g0010860 | OGI:03021200 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr03:7960054-7964788 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctacattttcttagccatgactttgagggggtttgcgagacatagcaccattccacatttttctgtcatgtctataccagtctccttgagctcttcaggaagggtccattcaaactgatgcaccagtgtccccagaacaaggtacatcactttttgtgctagtggcaatccaaggcaaatgcgtcgtccaacaccaaatggaacaaactgaaaattttgtcccagataattgatgtcattgccgatgaatctctcgggcatgaatttatccgggtcattccatgccctagcatctcggttgatagcccataagttcagaattacgttggtgcctttaggaatggtgaagccctggacctctatcgttgcctcggctctgcgaggcaccaatggcgcaacagcacgaagacgaagggtttctttcacaacggcctgaagatatgggagccgggcgatgtcaaattcttggatctgtgcattcgtgccaatgacatttgtgatctcctcctttatctttcgcattgactctggattttgcagtagatctgctattgcccactcgattaataccgaggtcgtactggctccagcaccgtataaatcctgagattatattggttaaattcagatatgcaatttatattagatggaactagtcatcaacctttgtattcgcttggataacatgctttaatttttcaaataatttctaatataggaatatacgggattttaaggttctctgttattgtgtttgttaagtgtatgtatttaaaaaccatatatcattctaactatgctcgctagattctcctttcgtcccaaaagaatttaacataagtggatatgtgattaatcctaatacaataaatctgaatagaatattggtcttgtttggtttagtacctaccaatatattggtagtttggcactaccaatattttggtagggtagaattataaataaatgtctttggattgatgccaattgagagccaaatttcaaattgtggtgaagaacattctagaattgtgccaaattgagtataggcattaccaaatatttggcttcaaaccaaatcatcacatttactatttaaactaccaaaaaattagtatggcaacgttttggtatcaaaccaaaacggcctattgtccatatttgttttactagaatgagtcacatctccatttaagttgagtttgttttatgaagggagtacgtacgaagcagtatatatacatgtgtagacatttttaaaataactttatgtgaccaatccggactctatctcaatatatagcgcacgttggtttagttattctcttgttggttatgtcatggactccaaacatttatgtaaaattcgaatgcatggaactctcacatattaattagagcaaccatacgatacactaattataccccatcgtttagccaaatacggataataaacaattcaacgtattagcaaaacaatagtaatttataggtaagacttttatcttagcgacttaaatgctaatgtaaaatataaactttgataaaaaaaactccaaaatcaacttcaaaattgggtttgaaaatttaattttggcagcaactgatgctgtatagagaaaacgatggagacctctagcccttttacccatctaggattaaaaacgggtgaatagttaaagtggtcctccaagtttcatgcaaggatcagtttagtacttaatgtttcaatgtgtccatattagtcctttaagtttttattttaattcaaatttatacttgaacccacataactaacaactcttttgataaatgacacttataccccctcattcacatatatataagagaaaaaattgcatgtaatgaattctttttatagataaaacaaaaataaattatgtacttgcaagtgtatacgatagccattaggctcaattttcatgtgcacatgttgaaataatgggaagtacatatgtaatgttgtttattcattttggttttcttttttctagtgtatagttgtatacaagttaagggcaaaagagatattttctaatagaattgatgactaaaaatagccatatggcatattaagtgggcccaatgatgatttttggccaaaacaaatacttaaaggacctatgtgaataaaataaaacctgaaggatcaaagtgagccttcggtaaaacttgagggactaaattagctattcacccattaaaaactgagaaaacttacacgagcgctttcaattagtaaagaaatatctatactaactagtattatatactactattaaaaggtaaaaggcagtagtgaatagtgatgttgtcaagtccgccaccaccaggatcctgacatacgggtgataaatagttgaatactcgccttgcttgctcgctgcaggccgtgacacttttcTtttttttgagggaaaggccatgacactttaattttctaagtacggtatttttttgtcttttaaaaataaaatatcctatttcaaccaactaataatatatttttcaacaaagattttgtttgctattttcaatattttcttgcaacgtatgaatatttggctagttacgctattaatagcgtatccgttggatacaccaaagtaataaaagaatccatataaattctcactttaattgagaaaacgagaaaatcattaacatgccaatcatataataaatactactcgtgtcatccaaaatataaggattcctagaaaatatgtagaaatttatttggttgagaaagcttatatattttaagataaattttgaaacggaggagtaccaaataacattatggtaccatagtggtgtcgacgctgaatgtctagatgttaggtgctaggaatattggcactaacctctttctataacatatgggtgcctgaaatcaaatttggagtactacttccgctttaatatatgacatggttgattttttttctcaaactttgacctacaacatttattcaattacttagttaagtgaaaagggtatcactaaatttatcatcaaaattaccccatcctccccataatatagtactgttttttttagctcttagcatagctattagatagagttgtaaaaaaaaacttgtttgtcgtctgggatgggtgtagtgtcggaccagactagtttagtgataaacgttaactcatatctcctaggttgttatatttaaagaaaatgaagaagttgtattttttgggacgtagggagtattttacaatagcagcatggtttgtctattttcataaatatctatataaatgatgagaagtcaagtaacttaaaaaaaatcaattgtggcctatattaaaaaacagtggtatgtataatactttagcacttaagcgtagcacttttcctgatgcccatagccatggagccgacctccaaacactttagcagccatggcggtggggctgcaatgagtgccaggtgtcgacgctatagacaccatagcctccttggcatcgacatgttgatacttgatatcatcatatcaatggctctagcatctagttttaggtctatcattaaaataagttttactcaaagtatatttatgaaatataagttttttataaaaggatcaacatgtaaaacatgcaggctttaggtgtgtttagtttacgccaaaattgagattttggttgaaaatggaacgatgcaacagaaaaattaaaaatttgtgtgtagaaaagttttgatgtgatgaaaaagttaaaagtttagaagtaaactcggcctttcttctacccacgtacgattataaaggtgatcatagaaatgacgggtgcgtacggtaaataatactctcattgcgtcgtggcttagtacggagcccttctgttgccactcgcgctccatgtcgagcaccacgtttagcaagtcgttcttgccagcctcgccggcgtcccgctcgggcctgcgacgcgcaacctgctcgtcgtattggcggtacgtgatggtgaacagttccgctaccctgcggcggacgccctggaggtcgagggcggcgatcgccgggaagaggtccgaaaggttcgccgtgccgatcagcagcatggcctcttccaccaccgacctgaacacggccgtcgattcggggtccaggtcgacggagtagatggcgctcagcatcaagctcagcgccatgtcgagcgcgacgcgcctgacgtgcacgggctcgccgcgcgccgcgagctcggagacgccgcggacgaggccccgcaccttgtcccggcacaggggctgcagcgcggcgagccgcctgggcgcgagcagctccgcggtggagaacctccggatggcgcgccacctgacgcccgggtgctccagcccgaggagggagttggcgctgtgccccatggcgttgaaggcgtcggcggtggggcggcccgcgaggttatccttgttcttgtggaagatctcgcgcatggcgtccggcgtcgagacgacgacggtgaggaccgtgccgaggcggagcgacatgacggggccgtagcggtcagcgaggcgcgcgagggagcggtgctgctggtcgcccttcccaagggcaaggaggtcgccgatgagaggcttcggcggccatgggccgggtggaaggcggcggcgcgcatcggcgaacaactggaagacgtacagggagaggaggatgaaacaaacccatggcagacatgccaccaggaagaatgccat
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| CDS seq | atggcattcttcctggtggcatgtctgccatgggtttgtttcatcctcctctccctgtacgtcttccagttgttcgccgatgcgcgccgccgccttccacccggcccatggccgccgaagcctctcatcggcgacctccttgcccttgggaagggcgaccagcagcaccgctccctcgcgcgcctcgctgaccgctacggccccgtcatgtcgctccgcctcggcacggtcctcaccgtcgtcgtctcgacgccggacgccatgcgcgagatcttccacaagaacaaggataacctcgcgggccgccccaccgccgacgccttcaacgccatggggcacagcgccaactccctcctcgggctggagcacccgggcgtcaggtggcgcgccatccggaggttctccaccgcggagctgctcgcgcccaggcggctcgccgcgctgcagcccctgtgccgggacaaggtgcggggcctcgtccgcggcgtctccgagctcgcggcgcgcggcgagcccgtgcacgtcaggcgcgtcgcgctcgacatggcgctgagcttgatgctgagcgccatctactccgtcgacctggaccccgaatcgacggccgtgttcaggtcggtggtggaagaggccatgctgctgatcggcacggcgaacctttcggacctcttcccggcgatcgccgccctcgacctccagggcgtccgccgcagggtagcggaactgttcaccatcacgtaccgccaatacgacgagcaggttgcgcgtcgcaggcccgagcgggacgccggcgaggctggcaagaacgacttgctaaacgtggtgctcgacatggagcgcgagtggcaacagaagggctccgatttatacggtgctggagccagtacgacctcggtattaatcgagtgggcaatagcagatctactgcaaaatccagagtcaatgcgaaagataaaggaggagatcacaaatgtcattggcacgaatgcacagatccaagaatttgacatcgcccggctcccatatcttcaggccgttgtgaaagaaacccttcgtcttcgtgctgttgcgccattggtgcctcgcagagccgaggcaacgatagaggtccagggcttcaccattcctaaaggcaccaacgtaattctgaacttatgggctatcaaccgagatgctagggcatggaatgacccggataaattcatgcccgagagattcatcggcaatgacatcaattatctgggacaaaattttcagtttgttccatttggtgttggacgacgcatttgccttggattgccactagcacaaaaagtgatgtaccttgttctggggacactggtgcatcagtttgaatggacccttcctgaagagctcaaggagactggtatagacatgacagaaaaatgtggaatggtgctatgtctcgcaaaccccctcaaagtcatggctaagaaaatgtag
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| Protein seq | MAFFLVACLPWVCFILLSLYVFQLFADARRRLPPGPWPPKPLIGDLLALGKGDQQHRSLARLADRYGPVMSLRLGTVLTVVVSTPDAMREIFHKNKDNLAGRPTADAFNAMGHSANSLLGLEHPGVRWRAIRRFSTAELLAPRRLAALQPLCRDKVRGLVRGVSELAARGEPVHVRRVALDMALSLMLSAIYSVDLDPESTAVFRSVVEEAMLLIGTANLSDLFPAIAALDLQGVRRRVAELFTITYRQYDEQVARRRPERDAGEAGKNDLLNVVLDMEREWQQKGSDLYGAGASTTSVLIEWAIADLLQNPESMRKIKEEITNVIGTNAQIQEFDIARLPYLQAVVKETLRLRAVAPLVPRRAEATIEVQGFTIPKGTNVILNLWAINRDARAWNDPDKFMPERFIGNDINYLGQNFQFVPFGVGRRICLGLPLAQKVMYLVLGTLVHQFEWTLPEELKETGIDMTEKCGMVLCLANPLKVMAKKM |
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| Function | Cytochrome P450 76C1 [UniProtKB/Swiss-Prot:O64636] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0010860 | OsCMeo_03g0010860.01 | Chr03 | 7960054 | 7964788 | - | NAM | ||
| CDS seq | atggcattcttcctggtggcatgtctgccatgggtttgtttcatcctcctctccctgtacgtcttccagttgttcgccgatgcgcgccgccgccttccacccggcccatggccgccgaagcctctcatcggcgacctccttgcccttgggaagggcgaccagcagcaccgctccctcgcgcgcctcgctgaccgctacggccccgtcatgtcgctccgcctcggcacggtcctcaccgtcgtcgtctcgacgccggacgccatgcgcgagatcttccacaagaacaaggataacctcgcgggccgccccaccgccgacgccttcaacgccatggggcacagcgccaactccctcctcgggctggagcacccgggcgtcaggtggcgcgccatccggaggttctccaccgcggagctgctcgcgcccaggcggctcgccgcgctgcagcccctgtgccgggacaaggtgcggggcctcgtccgcggcgtctccgagctcgcggcgcgcggcgagcccgtgcacgtcaggcgcgtcgcgctcgacatggcgctgagcttgatgctgagcgccatctactccgtcgacctggaccccgaatcgacggccgtgttcaggtcggtggtggaagaggccatgctgctgatcggcacggcgaacctttcggacctcttcccggcgatcgccgccctcgacctccagggcgtccgccgcagggtagcggaactgttcaccatcacgtaccgccaatacgacgagcaggttgcgcgtcgcaggcccgagcgggacgccggcgaggctggcaagaacgacttgctaaacgtggtgctcgacatggagcgcgagtggcaacagaagggctccgatttatacggtgctggagccagtacgacctcggtattaatcgagtgggcaatagcagatctactgcaaaatccagagtcaatgcgaaagataaaggaggagatcacaaatgtcattggcacgaatgcacagatccaagaatttgacatcgcccggctcccatatcttcaggccgttgtgaaagaaacccttcgtcttcgtgctgttgcgccattggtgcctcgcagagccgaggcaacgatagaggtccagggcttcaccattcctaaaggcaccaacgtaattctgaacttatgggctatcaaccgagatgctagggcatggaatgacccggataaattcatgcccgagagattcatcggcaatgacatcaattatctgggacaaaattttcagtttgttccatttggtgttggacgacgcatttgccttggattgccactagcacaaaaagtgatgtaccttgttctggggacactggtgcatcagtttgaatggacccttcctgaagagctcaaggagactggtatagacatgacagaaaaatgtggaatggtgctatgtctcgcaaaccccctcaaagtcatggctaagaaaatgtag
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| Protein seq | MAFFLVACLPWVCFILLSLYVFQLFADARRRLPPGPWPPKPLIGDLLALGKGDQQHRSLARLADRYGPVMSLRLGTVLTVVVSTPDAMREIFHKNKDNLAGRPTADAFNAMGHSANSLLGLEHPGVRWRAIRRFSTAELLAPRRLAALQPLCRDKVRGLVRGVSELAARGEPVHVRRVALDMALSLMLSAIYSVDLDPESTAVFRSVVEEAMLLIGTANLSDLFPAIAALDLQGVRRRVAELFTITYRQYDEQVARRRPERDAGEAGKNDLLNVVLDMEREWQQKGSDLYGAGASTTSVLIEWAIADLLQNPESMRKIKEEITNVIGTNAQIQEFDIARLPYLQAVVKETLRLRAVAPLVPRRAEATIEVQGFTIPKGTNVILNLWAINRDARAWNDPDKFMPERFIGNDINYLGQNFQFVPFGVGRRICLGLPLAQKVMYLVLGTLVHQFEWTLPEELKETGIDMTEKCGMVLCLANPLKVMAKKM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.245794 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0248300 | SBH | 0.0 | 0.000000 | 0.928019 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g14560 | RBH | 0.0 | 0.0 | 0.506324 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0248300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0011010 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0010880 | RBH | 0.0 | 0.0 | 0.428819 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004710 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0010850 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0010720 | RBH | 0.0 | 0.0 | 0.759918 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0132200 | RBH | 0.064174 | 0 | 0.0145405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0010610 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0132900 | RBH | 0.114769 | 0.0069465 | 0.054107 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0010770 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0010840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0010820 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0010800 | RBH | 0.0 | 0.0 | 0.154711 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0010720 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G010700 | RBH | 0.0 | 0.0 | 1.697366 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0010580 | RBH | 0.0 | 0.0 | 0.488105 |
