Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_03g0005900 OGI:03011140 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr03:4201331-4207403
Gene Symbol RLCK103, GUDK, OsRLCK103
DNA seq

ACACACCCCCAAACCAAAATTAACCAAACCCCCGCGCCGTTAACCCTCTGAGCTTGTGATGAATTAACGATCGTGACCGATCAAGTGAGCGATTAATAATAACCCAGCGGCACACAATTAAGCAATGCAAGAAGCCGTCGTCGTTAACACCGGCGGCCGGTGGGCACCAACCCGTATATATATACACTTCTATCCGGCCAAAGCAGCGGGCGCGGCCGGGTAACCCAACCACACACGCACGACACGAAGAACGCCATGGCGAAGCAGGCGTGGAGCTCGCTGTTCGGGTGCTTCACCTCGCACCACGACGGCGGCGGCAAGAGGAAGAAAGGCGGCGGCGGCGGGAAGAAGGCGAAGAAGAAGGTGGCGGCGGCGGCGAGCCAGAAGCAGCGGAAGCTGCAGAGCCGGCTGTCGTTCTCCGACCTGTCGTTCGGAGGGATGGTGTCGCCGGAGGACCTGTCGCTGTCGCTGGCCGGGTCGAACCTCCACGTCTTCACCATCGCCGAGCTCCGCGCCGTCACCAGGGACTTCTCCATGACCAACTTCATCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCTACGTCGACGACAAGCTCAAGCCCGGCCTCCGCGCGCAGCCCGTCGCCGTCAAGCTCCTCGACCTCGAGGGCACACAGGGACACAACGAGTGGCTGGTAAGTACGACACTTAATCACTAGTAGCTGCTTAATTACGCCTCGCTAAAATTTAATTATAAACTACTCCACTGCTTGCTAGCTCCATCGGCTCAGTTCATTACTTGCACGGTTGCACCTGTACGTGACCTCACATTATTACTAGCTGACATGCCTTGACACTCCAATTAGGCGGTTATTGTTGGTAACTAAATTAATACAGAACACCACTTTGCAAAAAGTACGAAACTGATCATAATGATCAGTTTGATGAATAGTGTGGTTCTTTACCTGCTATACGCATGACGGCATGAGATTATTGCTGCTATCTAGTACCTCTAGTTGATGAGACTTGCTTACTTGTTCAAAGTTAGTTGAGCTGTTCTAGTAATAAGGTTTGAGTTAATTAGCTGGGAATTTAAACCATGATAGGACTTCAGATAAAATTAATTAATTAACCTATATGTACATGTTACATAAGTTCAGGAAAGTATATACCCAGCGTAATTAGCATTATTAACTTGGCCTTGCTACGGTGGGTACAAATTAAAGTATATATTCTGAAATGTCAGGGGAAAGAATTCAGAAAATGATTACATATTTTCTATAAGAAAAGAAAACTTGGTTTTCTGTTGAAATATAAAATAAATTGCTTGTATTTCCTCACTAGCTTAAGTTTCAACATGGAAATAGAGCCAAAGGTCTCGAATTCAAATCTTGCCAGCTGGTGCGTAATTAAATTAAAATTGCATCCACTTTTATTCTATCCTATAGGCTTGATGAGGCCCGCATGAGAGGATATTAGAATATGTAATTACTTGTTTTTCTTCATTAGCTTAATTAAACTTTTGGGTTAAATTGATCGGTGTATGCAACCGAGCTGAACTTTATTTTGCAGTATCTATTGCTTTTTTTTGTTTAAAATGGTTAATTAGTATTCCTTAAAAAAAGGTTAATTAGTATTGTGATACTGTATTTGTTTATGAGTACGTACCTGCTCTATTCTTTCTACTATATTTTTTTCTCAATATTCCAAACCACTAGTCTTTTCTTATATTAAAATGGTTAATTGTTATTGTAATACTGTATTAGTTTATGAATACGTACCTGCTCGATTATTTTTACTATTCATTTTCTCAATATTCCAAATCACTAGTCTTTTCTTAGAAGTAGAAGTTTTCTTGGTTGACGTGTTACACATACTGAACTCCATTCGAGAAAGTTTCAGAAGTTTGCTGCTAGATAGTAGATACCATGGAACAATAATTCAATAGAACAGTGCTGCTTGCTTAGCTGAAATGCTTCCTTATTTTATTTTTCTCCCAGTTAAAAGCAATCAAATGAGAAAAAAAAATGTCTGAACTTGACTGACAAGTCTGCAAATGCATACATGGCCCGATGATTATGCAGACTGAAGTCATCTTTCTGGGGCAACTGAGGCATCCTCACCTCGTCAAACTGATCGGCTACTGCTACGAGGATGAACACAGACTTCTCGTTTACGAGTTCATGACGAGGGGCAGCTTGGAGAAGCATCTCTTCAAAAGTAAGCTTGAAAAAAAAATACTAATATTTTGTTATTGTTTCCTATATTATGCTAGCTTTCTGCTACTCTGAATATACAAGAAATTTGGTGCAAGCCTCAGTTGTTTTCTGACAAATTAGCAGAAGTAATTAAGAATAAAAGCGTAACTGAGATTAGAGAGAATTGAAACGATTTACATATATATCAACGGTATAAGTATATATTATAGCAGAGTGACAATCTTGCAGGCAACAAGAAAGAGATATTCGTAAAACATTGCTATCACTCTGCTTTTTCCTCGCTGCATCATTAAGCTAAAAAGGATTCGACAGAATCTCTAGGCTGAACATCGGTTGAAATGGACGGCGCGATTTTACCAACTCGCTGGCATAAACTTTTCTGCAAATTGGTGGCGCGGCTAAGCTCGATTGATCGAGTAACTTTTCTTGCTCTACACCCTTCAATATGTTTCTCCAGTTTTTCCTGATGGTTCAAACTGCCTTTTTAGACCTTTGTTGTGACGTCCATTTTTGCGTTACATCATATCTCACTCTCTGTATGGAGTCATTTTCTCTTAACCACTTTGATATAATTCACACCTGCAACTTGCTTTTGTTCTCCTCTTTGTCTGTCTCTTGTACAGTCCTACTGTCATGTCTTCTTTGTCTATTTGCCTCTGCATAGTGAAGAGGAAACAGCGCAGATTTGATGTATAATCATGAGTATGGTAGGGGTAGGACACCTTCACCACTCGTTGTCTACTATGGTTTTTTCACATTAGTACTTGCGTCAAAGTAGTAGACAACCCCTAATATGTGATTTGGATCAACCTCATAAGTCAAAATTCGTGGCTTGTGTTATCGGTAACCACATGATCTAGTCACCTCGATCTATCAATTACTACTGGTTTAAGAGACATAGTAGCACAATATGCTTCATGTTTTATTAATGAAGCAAGGTAGCCCTGAAAACTGAAAAATCACGTGTGAGGGAGTACAGTGATTAAACTGTTGCAAATTAATTAAGAGATAGCAACGTTTCAGCAAAGTTTTTTTTAAGTAAATCCGATGTCATTAGTTTCATGTAGTCAGTCTACTGTCATGGACATGCAGATGCATGCTGACCAAAATGTACATTTCTCTTCTTAATTCAAGCTCCATATGTGCATACTATTATTAGTTCAACTTAATCGTCTTATCTGATTACATATCGTACTTACACACCAAATGTGCAGAGTACGCAGCGTCGTTGCCATGGTCAACACGGTTGAAGATCGCCATAGGTGCCGCGAAAGGGTTGGCCTTTCTCCATGAAGCCGAGAAGCCGGTCATCTACCGAGACTTCAAGACCTCCAACATCTTGCTAGACTCGGTACGTCCTTGACCTTAATTACGTTACCATCGTGGCATCGTATATGTGTTCTTCACCTACTTCCCCAAAAGATTGACCTGGTTGTCATTTGATCTCTAATAAGGTTATTAGTAGTCAGAAAAGTTATATTCTTTTAGATAATAGTCAGAATAGATGCATCATGCATGCATGGTTTGGTTGCTTGTACGTTCTTAATTAGTTTCCAGTATGAAACTGTCGTGATGCCAAATGCCAAGTACTAAACAACAAATCTTGACTACTACTCGATCGCCTATGTATACTGAACTAAGAATTGGTCAGGTTTCAGACTTTCAGTTTCAACTATAGCAGCGCTCCCGTTTTGTCATCAATGCGTTAACGTGACAAAGGCCGCGAATTTAGTTCTAAATTTTTTCTTCAAACTTCCAATTTTTTATTACATCAAAAGTTTCCTACACACACAAACTTTTAACTTTTCCGTCATATCGTTTTAATTTCAACCAAAGGCCGTGTTTAGTTCCTGAAAAAAGTTGAAAGTTTGAGGAAAGTTGGGAATTTAAAAAAAAAGTTGAAAATTTATGTGTGTAGGAAAATTTTTGATATAATGTGATGTGATGGAAAGTTGAAGGTTTAGGGTAGTTGGGGGTAAACTAAACACGGTCAAACTTCTAATTTTAGCGTGAACTAAACACACCCAAAGAAAGAGCAGGGTGGTATGACTATTTCTCCGTGGAGAAAAAAAACTGAAAAAAAAAGGTAAAACATGGAGTGATTCATCAGTTTAAACTAAATTATTACGCGCGTGATAAACAGAGTTGTTGGAGTTGGGTGCATGGTGATATTTCCCTCTGAACAATAATCCCTAGCAGGCTAGCACTACTGCTAGTGCATTTGCTTTGGTTACGCTATTATTTCTCCATCAACTGAATCCTGCAGTTGCAGCAGAAAGGTTTTCTTACACAAGTACAATTCTGTAGCAATCTTAATTTTGTTTTCGTTGCTGAATTGTCCGTAGGACTTCAAAGCCAAGCTCTCAGATTTCGGGCTAGCGAAGGACGGGCCAGAGGATGACGAGACGCATGTCTCGACACGTGTCATGGGCACACAGGGATACGCTGCACCAGAGTACATCATGACAGGTTTGACAGCAGAAAAAACTGCAACCTTTTACCCCATCCTAAATAAACAATATAATATAAAATGTGATATATCCTATTCAGATTTGTAATACTAAATCTGTCACATTTCTCTTTTTCTAAAAAAAATTTTGAAATATATGGAGTAAGGGTGAGTTTGAGGAGAGGGGGATAGAGAAGATTGGGAAGATACGTAAAACGAGGTGAGCCATTAGCGTATGATTAATTGATTATTAATTATTTTAAATTTTAAAAATGGATTAATATGATTTTTTAAAGCAACTTTTCTATAGAAATTTTTTACAAAAAATACACCGTTTAGTAGTTTAGGAAGCGTGCGCATAGAATACGATGTCCCTTTCTCACCCAATCCATCCCCTAGAACGAACGCACCCTAAGTTTTACTCCGACAATCTGATCGATGGTTTGTCAGTAGATTAAAAGCAATATAATTATGGTCTTGTTATCAAATTATTTTTAGGGCATCTGACGGCGAAGAGCGACGTGTACGGCTTCGGCGTGGTGCTGCTGGAGCTGCTGTCGGGGAGGAAGTCGGTGGACAAGAGCCGGCCGGCGCGGGAGCAGAACCTGGTGGAGTGGGCCCGGCCGTACCTGACCGACGCGCGGCGGCTGGGCCGCGTCATGGACCGCAACCTCGCCGGCCAGTACCCGGCCAAGGCGGCGCAGAAGGCCGCCGCGCTGGCGCACCGCTGCGTCAGCCTCAACCCCAAGTCCCGCCCCCACATGTCCGCCGTCGTCGAGGCGCTCGAGCCGCTCCTCGCCCTCGACGACGACTGCCTCGTCGGCACCTTCGTCTACGTCGCGCCGCCCGACGACGTCGCCGCCAACGGCGACGGCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGCGGCCGATGGTGTGCAGCGGGAATGACTCGGTTTTGCTTGCGTTTGTCTGTACTCGTCGAGCTACGTGCTGATCAAGCGATGCCGGTAAATTAATCCGGATCAGTGAGTTGGCTCGTGGGTAAAAAATGATTGTGGATTTGAAGCATGTTATTATTTGTCTTAGGCTTGAATAGCAGAATAGGATTAGAGCGTGTAAATACGAGCATGTCAGACGTACATGAGCAAATTGAGCATGTAAACAGTTTGACAAAATATGGATGGTTTATCACTTCTCATGTTGGGAGGTTTCTCTAGTATCTTCCCAGCGCCGTGAAATATCTCTGTTGATAGACACTGTATGCTGTACGCGAGTATGTTATTACTGTTTGCTGAAAGACTGTAGGTTTTCTCCGTGTGCACTGTATTTAAATTTTGAGAAGCTGCAAGGATTTAGTAATGGTAATGTTGGTGGTGTACGGTGTGGGAATGCAATACAACTGTAACAATTGGAC

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CDS seq

ATGGCGAAGCAGGCGTGGAGCTCGCTGTTCGGGTGCTTCACCTCGCACCACGACGGCGGCGGCAAGAGGAAGAAAGGCGGCGGCGGCGGGAAGAAGGCGAAGAAGAAGGTGGCGGCGGCGGCGAGCCAGAAGCAGCGGAAGCTGCAGAGCCGGCTGTCGTTCTCCGACCTGTCGTTCGGAGGGATGGTGTCGCCGGAGGACCTGTCGCTGTCGCTGGCCGGGTCGAACCTCCACGTCTTCACCATCGCCGAGCTCCGCGCCGTCACCAGGGACTTCTCCATGACCAACTTCATCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCTACGTCGACGACAAGCTCAAGCCCGGCCTCCGCGCGCAGCCCGTCGCCGTCAAGCTCCTCGACCTCGAGGGCACACAGGGACACAACGAGTGGCTGACTGAAGTCATCTTTCTGGGGCAACTGAGGCATCCTCACCTCGTCAAACTGATCGGCTACTGCTACGAGGATGAACACAGACTTCTCGTTTACGAGTTCATGACGAGGGGCAGCTTGGAGAAGCATCTCTTCAAAAAGTACGCAGCGTCGTTGCCATGGTCAACACGGTTGAAGATCGCCATAGGTGCCGCGAAAGGGTTGGCCTTTCTCCATGAAGCCGAGAAGCCGGTCATCTACCGAGACTTCAAGACCTCCAACATCTTGCTAGACTCGGACTTCAAAGCCAAGCTCTCAGATTTCGGGCTAGCGAAGGACGGGCCAGAGGATGACGAGACGCATGTCTCGACACGGCATCTGACGGCGAAGAGCGACGTGTACGGCTTCGGCGTGGTGCTGCTGGAGCTGCTGTCGGGGAGGAAGTCGGTGGACAAGAGCCGGCCGGCGCGGGAGCAGAACCTGGTGGAGTGGGCCCGGCCGTACCTGACCGACGCGCGGCGGCTGGGCCGCGTCATGGACCGCAACCTCGCCGGCCAGTACCCGGCCAAGGCGGCGCAGAAGGCCGCCGCGCTGGCGCACCGCTGCGTCAGCCTCAACCCCAAGTCCCGCCCCCACATGTCCGCCGTCGTCGAGGCGCTCGAGCCGCTCCTCGCCCTCGACGACGACTGCCTCGTCGGCACCTTCGTCTACGTCGCGCCGCCCGACGACGTCGCCGCCAACGGCGACGGCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGCGGCCGATGGTGTGCAGCGGGAATGA

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Protein seq

MAKQAWSSLFGCFTSHHDGGGKRKKGGGGGKKAKKKVAAAASQKQRKLQSRLSFSDLSFGGMVSPEDLSLSLAGSNLHVFTIAELRAVTRDFSMTNFIGEGGFGPVYKGYVDDKLKPGLRAQPVAVKLLDLEGTQGHNEWLTEVIFLGQLRHPHLVKLIGYCYEDEHRLLVYEFMTRGSLEKHLFKKYAASLPWSTRLKIAIGAAKGLAFLHEAEKPVIYRDFKTSNILLDSDFKAKLSDFGLAKDGPEDDETHVSTRHLTAKSDVYGFGVVLLELLSGRKSVDKSRPAREQNLVEWARPYLTDARRLGRVMDRNLAGQYPAKAAQKAAALAHRCVSLNPKSRPHMSAVVEALEPLLALDDDCLVGTFVYVAPPDDVAANGDGSSKRRAGRRRSDGAAAAAAADGVQRE

Function Serine/threonine-protein kinase RIPK [UniProtKB/Swiss-Prot:Q9ZUF4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_03g0005900 OsCMeo_03g0005900.01 Chr03 4201331 4207403 + NAM
CDS seq

ATGGCGAAGCAGGCGTGGAGCTCGCTGTTCGGGTGCTTCACCTCGCACCACGACGGCGGCGGCAAGAGGAAGAAAGGCGGCGGCGGCGGGAAGAAGGCGAAGAAGAAGGTGGCGGCGGCGGCGAGCCAGAAGCAGCGGAAGCTGCAGAGCCGGCTGTCGTTCTCCGACCTGTCGTTCGGAGGGATGGTGTCGCCGGAGGACCTGTCGCTGTCGCTGGCCGGGTCGAACCTCCACGTCTTCACCATCGCCGAGCTCCGCGCCGTCACCAGGGACTTCTCCATGACCAACTTCATCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCTACGTCGACGACAAGCTCAAGCCCGGCCTCCGCGCGCAGCCCGTCGCCGTCAAGCTCCTCGACCTCGAGGGCACACAGGGACACAACGAGTGGCTGACTGAAGTCATCTTTCTGGGGCAACTGAGGCATCCTCACCTCGTCAAACTGATCGGCTACTGCTACGAGGATGAACACAGACTTCTCGTTTACGAGTTCATGACGAGGGGCAGCTTGGAGAAGCATCTCTTCAAAAAGTACGCAGCGTCGTTGCCATGGTCAACACGGTTGAAGATCGCCATAGGTGCCGCGAAAGGGTTGGCCTTTCTCCATGAAGCCGAGAAGCCGGTCATCTACCGAGACTTCAAGACCTCCAACATCTTGCTAGACTCGGACTTCAAAGCCAAGCTCTCAGATTTCGGGCTAGCGAAGGACGGGCCAGAGGATGACGAGACGCATGTCTCGACACGGCATCTGACGGCGAAGAGCGACGTGTACGGCTTCGGCGTGGTGCTGCTGGAGCTGCTGTCGGGGAGGAAGTCGGTGGACAAGAGCCGGCCGGCGCGGGAGCAGAACCTGGTGGAGTGGGCCCGGCCGTACCTGACCGACGCGCGGCGGCTGGGCCGCGTCATGGACCGCAACCTCGCCGGCCAGTACCCGGCCAAGGCGGCGCAGAAGGCCGCCGCGCTGGCGCACCGCTGCGTCAGCCTCAACCCCAAGTCCCGCCCCCACATGTCCGCCGTCGTCGAGGCGCTCGAGCCGCTCCTCGCCCTCGACGACGACTGCCTCGTCGGCACCTTCGTCTACGTCGCGCCGCCCGACGACGTCGCCGCCAACGGCGACGGCAGCAGCAAGAGGCGAGCCGGCCGGAGGAGGTCTGACGGCGCCGCGGCGGCGGCGGCGGCCGATGGTGTGCAGCGGGAATGA

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Protein seq

MAKQAWSSLFGCFTSHHDGGGKRKKGGGGGKKAKKKVAAAASQKQRKLQSRLSFSDLSFGGMVSPEDLSLSLAGSNLHVFTIAELRAVTRDFSMTNFIGEGGFGPVYKGYVDDKLKPGLRAQPVAVKLLDLEGTQGHNEWLTEVIFLGQLRHPHLVKLIGYCYEDEHRLLVYEFMTRGSLEKHLFKKYAASLPWSTRLKIAIGAAKGLAFLHEAEKPVIYRDFKTSNILLDSDFKAKLSDFGLAKDGPEDDETHVSTRHLTAKSDVYGFGVVLLELLSGRKSVDKSRPAREQNLVEWARPYLTDARRLGRVMDRNLAGQYPAKAAQKAAALAHRCVSLNPKSRPHMSAVVEALEPLLALDDDCLVGTFVYVAPPDDVAANGDGSSKRRAGRRRSDGAAAAAAADGVQRE

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_03g0005900 OsCMeo_03g0005900.02 Chr03 4201538 4207281 + IsoSeq
CDS seq

ATGTTATTATTTGTCTTAGGCTTGAATAGCAGAATAGGATTAGAGCGTGTAAATACGAGCATGTCAGACGTACATGAGCAAATTGAGCATGTAAACAGTTTGACAAAATATGGATGGTTTATCACTTCTCATGTTGGGAGGTTT

Protein seq

MLLFVLGLNSRIGLERVNTSMSDVHEQIEHVNSLTKYGWFITSHVGRF

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr03 4205953 4206480 + OsCMeo_03g0005900.02 OsCMeo_03g0005900.01,OsCMeo_03g0005900.02 All

Expression

Leaf Root Panicle
FPKM 0.0 9.105957 5.023776

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0179400 RBH 0.267846 0.0 0.475514
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g08170 RBH 0.164254 0.0 0.111002
Nipponbare | IRGSP 1.0 | RAP-db Os03g0179400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0005920 RBH 0.097051 24.293850 2.197371
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0005880 RBH 0.000000 4.101585 1.040725
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0023000 SBH 1.130897 16.885782 2.523235
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0005870 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0005850 RBH 0.000000 3.528973 8.989991
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0067800 RBH 0.9095405 5.5907675 0.137409
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0005750 RBH 0.000000 0.254836 0.413344
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0068100 RBH 1.378079 1.948176 0.1075115
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0005810 RBH 0.084665 0.471470 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0005830 RBH 0.000000 3.082309 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0005790 RBH 0.0 18.813341 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0005830 RBH 0.094188 0.801154 0.890983
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0005830 RBH 0.0 3.186210 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G005830 RBH 0.0 0.0 0.652831
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0005670 RBH 0.238632 14.594507 5.596814
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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