Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_03g0004830 | OGI:03009110 | 9/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr03:3515877-3516709 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CATGAGATCACTAATTTTCACTAACATAATGACAATTACTACAAACGATCCCATTAACCACGCACGAGTATCGTCGAGCTCTTTTTTCTTTTTCATTAATTTTTTTGTACGCCAATTCTAGTTCAGAGATATGGTCAGCCGTATCTAACTCTAACTTCATTTTTTCTTCCTCGGCCTTTGTATTCCGAACGAAACAACACCAGTCATATTGTTTCGAACCGGTTAGCTTGGTAGCACGTTCCACTGCATGCCACATCTGCTCAAGTGTCTTCTGAACTCTTGGGTGCCATGGTTCGTCGACCCAAAAAAATTTATCGCACTGATCCTCTTCCTGAAACGAATAACAGTTCGTAAAAACCAACCGAATGAATTTTCTTTTGTTTTCAAGGACTTTTGAGCTCACCTCCAGCGGACAACCTAAGAACCTTCTTCCTGTGTCAGGTCCTTCCCAAGCTGTCCTCCGTTTCGGCGTGAGGCCATGCCTGCAAGTTAGTCTGGTGCCAAGCTCCTCTCCACAATACTCCGAATCTTCAATGTACATCGGGACATCCATGCACAGACCATGGCGATATTCCTACAAACACGAGATCGGTGAAGAAAAAAAAATTGAAAAATCGTTGAAAGGTACTTGTATTTTCATTTACCTTAACAGCGCCGTCCGCCATTGCAGCTTCGTTGTTCTGTACCTTCTTGCTTGTTACCATGGCTGTTATCTGTGGAGTGAGGATGAGGTTGATGGATGCACTAGTGTGACCAGCAACTAGCTACAACCGAAGCAGCATATATGGACGAGTACTAAATGAGGTAGTTGGTTGGTTCGCTAGTCCAACCAT
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| CDS seq | ATGCTAGTTGCTGGTCACACTAGTGCATCCATCAACCTCATCCTCACTCCACAGATAACAGCCATGGTAACAAGCAAGAAGGTACAGAACAACGAAGCTGCAATGGCGGACGGCGCTGTTAAGGAATATCGCCATGGTCTGTGCATGGATGTCCCGATGTACATTGAAGATTCGGAGTATTGTGGAGAGGAGCTTGGCACCAGACTAACTTGCAGGCATGGCCTCACGCCGAAACGGAGGACAGCTTGGGAAGGACCTGACACAGGAAGAAGGTTCTTAGGTTGTCCGCTGGAGGAAGAGGATCAGTGCGATAAATTTTTTTGGGTCGACGAACCATGGCACCCAAGAGTTCAGAAGACACTTGAGCAGATGTGGCATGCAGTGGAACGTGCTACCAAGCTAACCGGTTCGAAACAATATGACTGGTGTTGTTTCGTTCGGAATACAAAGGCCGAGGAAGAAAAAATGAAGTTAGAGTTAGATACGGCTGACCATATCTCTGAACTAGAATTGGCGTACAAAAAAATTAATGAAAAAGAAAAAAGAGCTCGACGATACTCGTGCGTGGTTAATGGGATCGTTTGTAGTAATTGTCATTATGTTAGTGAAAATTAG
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| Protein seq | MLVAGHTSASINLILTPQITAMVTSKKVQNNEAAMADGAVKEYRHGLCMDVPMYIEDSEYCGEELGTRLTCRHGLTPKRRTAWEGPDTGRRFLGCPLEEEDQCDKFFWVDEPWHPRVQKTLEQMWHAVERATKLTGSKQYDWCCFVRNTKAEEEKMKLELDTADHISELELAYKKINEKEKRARRYSCVVNGIVCSNCHYVSEN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0004830 | OsCMeo_03g0004830.01 | Chr03 | 3515877 | 3516709 | - | NAM | ||
| CDS seq | ATGCTAGTTGCTGGTCACACTAGTGCATCCATCAACCTCATCCTCACTCCACAGATAACAGCCATGGTAACAAGCAAGAAGGTACAGAACAACGAAGCTGCAATGGCGGACGGCGCTGTTAAGGAATATCGCCATGGTCTGTGCATGGATGTCCCGATGTACATTGAAGATTCGGAGTATTGTGGAGAGGAGCTTGGCACCAGACTAACTTGCAGGCATGGCCTCACGCCGAAACGGAGGACAGCTTGGGAAGGACCTGACACAGGAAGAAGGTTCTTAGGTTGTCCGCTGGAGGAAGAGGATCAGTGCGATAAATTTTTTTGGGTCGACGAACCATGGCACCCAAGAGTTCAGAAGACACTTGAGCAGATGTGGCATGCAGTGGAACGTGCTACCAAGCTAACCGGTTCGAAACAATATGACTGGTGTTGTTTCGTTCGGAATACAAAGGCCGAGGAAGAAAAAATGAAGTTAGAGTTAGATACGGCTGACCATATCTCTGAACTAGAATTGGCGTACAAAAAAATTAATGAAAAAGAAAAAAGAGCTCGACGATACTCGTGCGTGGTTAATGGGATCGTTTGTAGTAATTGTCATTATGTTAGTGAAAATTAG
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| Protein seq | MLVAGHTSASINLILTPQITAMVTSKKVQNNEAAMADGAVKEYRHGLCMDVPMYIEDSEYCGEELGTRLTCRHGLTPKRRTAWEGPDTGRRFLGCPLEEEDQCDKFFWVDEPWHPRVQKTLEQMWHAVERATKLTGSKQYDWCCFVRNTKAEEEKMKLELDTADHISELELAYKKINEKEKRARRYSCVVNGIVCSNCHYVSEN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0164200 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g06840 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0164200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0004850 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0004780 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0004760 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0055500 | SBH | 0.0374105 | 0 | 0.076619 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0004740 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G004770 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0004600 | RBH | 0.0 | 0.0 | 0.0 |
