Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0036530 | OGI:02094970 | 10/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:34210421-34211718 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcattcgttgcgcgcagcagaaaggtccaccttgatctttcttcctctctagccaataacctcccaaattaagcctaccaattgggcaagatccaccccatattcaatccaatccacaacagctagcaatgttatcccaaaccatcccaatccactagccatcccataaaatccaaaccagaccaatccattttcctcattagtctaaaccgaaccaacctattcttcttttatggcctcaatccacctcccaaaccatttaaacctacatcaaatccacttcgatccttcaatagtcatgccgtactcaccggcggcgacgcagctggatagagcaaatgttgcatgcatgtaactgtggcgtcgtggtgacggcagaggacatgacgccagcgccgttctcagctacggtcacgtcgacgtaggcgcaggagcatcgtgaggccagccagctcgctaaggccgtctcctcggcggtggcggcggtgagcgatgggccgacgacacaactgctcccttgtacatatcgcacacctgcagttagctatggtgaccatgcccagcggcaccatccccgccgtagtagatgttgtctaggctcagcacgggccatcaccagccacggcaaggaaatccaatcgccatgtgggagcagtggggcaacaacaagaagcctagtcggcacaagagcgggtagctctagcggcgagacgggaggagatcgaagagatgcaacgagacacgttccaactgcctcgactcccacgaatacggtgccgccatgcgcggcctctccgctgactgtcgccaccaagtccaggtcatgtgtgacctctcccgagacgaagaggacggcaacaaggagtagtcaaactcggtctgttaaaggaatccacttgccatccatgggttaaatccactttcaacccgatatcaccaaatcaaatccaggccacaccaatccacttatgtgtcaccaaaaccgatccaatccatttgaaatagcaacccattttcacccaatcaaagataatccaaactagaatccagtccatttaagccattccaactcaatccattagcaggcttacttccaattaccgtgccacagtcagactcaatactcgaccgatattggtacattttaggccttcacgacaagcaaataattcaacctcctctgctgccacacattttctgaaaaatctctaggacgttagaattactctcccgtcaatatttctaatcacaattcctattgctccatttccttcattagaggagaaagccccatccat
More
|
||||||||||
| CDS seq | atggatggggctttctcctctaatgaaggaaatggagcaataggaattgtgattagaaatattgacgggagagtaattctaacaaaatgtgtggcagcagaggaggttgaattatttgcttgtcgtgaaggcctaaaatgtaccaatatcggtcgagtattgagtctgactgtggcacgttgtgtcgtcggcccatcgctcaccgccgccaccgccgaggagacggccttagcgagctggctggcctcacgatgctcctgcgcctacgtcgacgtgaccgtagctgagaacggcgctggcgtcatgtcctctgccgtcaccacgacgccacagttacatgcatgcaacatttgctctatccagctgcgtcgccgccgaggaagaaagatcaaggtggacctttctgctgcgcgcaacgaatga
More
|
||||||||||
| Protein seq | MDGAFSSNEGNGAIGIVIRNIDGRVILTKCVAAEEVELFACREGLKCTNIGRVLSLTVARCVVGPSLTAATAEETALASWLASRCSCAYVDVTVAENGAGVMSSAVTTTPQLHACNICSIQLRRRRGRKIKVDLSAARNE |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0036530 | OsCMeo_02g0036530.01 | Chr02 | 34210421 | 34211718 | - | NAM | ||
| CDS seq | atggatggggctttctcctctaatgaaggaaatggagcaataggaattgtgattagaaatattgacgggagagtaattctaacaaaatgtgtggcagcagaggaggttgaattatttgcttgtcgtgaaggcctaaaatgtaccaatatcggtcgagtattgagtctgactgtggcacgttgtgtcgtcggcccatcgctcaccgccgccaccgccgaggagacggccttagcgagctggctggcctcacgatgctcctgcgcctacgtcgacgtgaccgtagctgagaacggcgctggcgtcatgtcctctgccgtcaccacgacgccacagttacatgcatgcaacatttgctctatccagctgcgtcgccgccgaggaagaaagatcaaggtggacctttctgctgcgcgcaacgaatga
More
|
|||||||
| Protein seq | MDGAFSSNEGNGAIGIVIRNIDGRVILTKCVAAEEVELFACREGLKCTNIGRVLSLTVARCVVGPSLTAATAEETALASWLASRCSCAYVDVTVAENGAGVMSSAVTTTPQLHACNICSIQLRRRRGRKIKVDLSAARNE |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036590 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036700 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0006470 | RBH | 0.0 | 0.0 | 0.482579 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0036160 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0036340 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0550800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0036130 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0581200 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036650 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0036420 | RBH | 0.0 | 0.0 | 0.0 |
