Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0035760 | OGI:02093050 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:33576239-33578905 | ||||||||
| Gene Symbol | OsSub22, SUB22, OsSASP, SASP | ||||||||||
| DNA seq | agcatgggaatccaggtaatttagcataaataaaattattcaccactccaatccagtgagttacacatgtgcatagcgatgaacaggcaaccgatcccttccatgaagccatgggagcactaagcttcatggaaggatttggtctcatgcgtggagatctctgtccaagaaggacctatacaagctgtccccattgccaccaaaccagaagacacccaaatttccaacactactctacatggatgctgctcggccgttcgacggccatgtcacggcgatggggctagtgacgtcgtgcacgccgtcgctccaggtgaccgacccgaaggtgtactcggtgtcgacgatcaccgggttacccgacgcggcgatggtgatgtcgtaggacaggctctggtggctctcgtcgaacaccagcttgcttgggctcaccgtgacatccacaccggacgggctgtcgatcttggcttcgtagacggcattggcgttgctgccgacgttgcgcaccaccctgtggtaggtgactgaatctttgtaggaggataggacgacggcgaaggcggggtagttgaggtccccggtgcgggggaatttcgtcgaacagttggcgacggagccgtctgttgtgaagagggagatgatggagggggagtagccgagcgtgcagaggaaggagacgtagtcttcggtcccggcgtcgtacacgaggccagggtcgagcgcgcggttggggtcgacgtggccggcgccacggacgaacggcgtcgactcggtcccggtagccaggtccttgatgaccgcgctggagttgtccacgttgtacgccgtggtcatgagcgccgacttgatcgccgccgggctccagtccggttgcgcctggcggagcagcgcggcgaggccgctgacgtgcgggcacgacatggacgtgccggagatgatgttgaactccacgcgcctcgggtcgatgtcgaggtcggtgggcgcagactcgcctgtccacgccgcgaggatgttgacgccgggggcaatgacgtccggcttgaggatctccggcgcgcggtagttggggccccggctcgagaacgccgcgacgcgcggcgcggacggcgacttcccgatgaccgtgccccggaacacgatggtcgccgtcggcgacggatcgctctggacgtagtacttgatcttgtcgccgaatttctgccccaccattgtcgccgggacgaggtgggagtcggcaaccagctcctcgccgctctccgccgtgttcaccagaatcatgccggcaccgccggccaccttcactgccccgcctttcgccacacgggcgttgctcccacgctcacacagaacgatcttgccggaaaccttcgctggatcgagctcgccgattatgcaaagccgagacccgcagtcgccggcgtacaccaccgggagcagtgtggagttcaggggttcgccggagtacagggacacgccgccgtagacctgaccgttgcctagaaccacatcagccgggaattcgcggtcgatggtagatgcgccgacggtcagtatccatggcgcgatgttcgtcgcggtgtactcgccggggccggagttgccggcggacgcggacaccacgatgcccttgctaacggcgtggaaggagccgatggcgatggagtcgcggaagaagctcggggcgtagccgccggcgccgacggagagggatatgacgtcgacgccgtccgcgacggcctcgtccatggcggcgaggatgtcggagtcgtagcagccggacttccagcagatcttgtacgcggcgatgtgcgccgcgggggacatgcccaccgcctggccacgcgcgtagtcgaagaacccggcgccggtcaccggcgaccctgcggcggtggaggcggtgtgggtcccgtggccctcggtgtccagtggcgacttggactcctccgtctcatcgatggcgtggccgagagcagcctcgtatcccttgtagaagaactttgcgccgatgagcttgttgttgcagtaggcggaggcgttgaaggaggcggtggagacgcatccgccggagaaggacgcgggcggcgggccgagcccgtcggtgggcgcgaaggagccgcggccgatggggtagatcccggtgtcgagcaccccgacgatgggtgacgacgcgccaccggaggcggcggcggcggcggcggcggcgggcaggagcccggaagcctgggtaaggtggaggaacgccggggtatgggtggtgtgcagctggcgcgcctggtcggggtggacggcgagcaccccaggctgcgcctcgacgtgcgccgcctgttcgggggtgaggcgcgccgcgacccccgtcgctgcgtgcgcgtaggagtagagcaaccgtggccgcggtgcgcgcagatggcgcgggaggcgaaggaggcggccgaggaacacggcgccgccgccgccgccgacgcgcgtggccctgagcgccgggtgctcgggcgcgaggtggaggatgtacgtcgactgctctctcgcggccgccgccgccggcgacgcggcggcgaagaggatgaggagcacggcggcgagatggcggagggtagccatggcgcaccgggggagcggattggattggtcgatgactcgacgccaatgcggcctggagaactaaataag
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| CDS seq | atggctaccctccgccatctcgccgccgtgctcctcatcctcttcgccgccgcgtcgccggcggcggcggccgcgagagagcagtcgacgtacatcctccacctcgcgcccgagcacccggcgctcagggccacgcgcgtcggcggcggcggcggcgccgtgttcctcggccgcctccttcgcctcccgcgccatctgcgcgcaccgcggccacggttgctctactcctacgcgcacgcagcgacgggggtcgcggcgcgcctcacccccgaacaggcggcgcacgtcgaggcgcagcctggggtgctcgccgtccaccccgaccaggcgcgccagctgcacaccacccataccccggcgttcctccaccttacccaggcttccgggctcctgcccgccgccgccgccgccgccgccgcctccggtggcgcgtcgtcacccatcgtcggggtgctcgacaccgggatctaccccatcggccgcggctccttcgcgcccaccgacgggctcggcccgccgcccgcgtccttctccggcggatgcgtctccaccgcctccttcaacgcctccgcctactgcaacaacaagctcatcggcgcaaagttcttctacaagggatacgaggctgctctcggccacgccatcgatgagacggaggagtccaagtcgccactggacaccgagggccacgggacccacaccgcctccaccgccgcagggtcgccggtgaccggcgccgggttcttcgactacgcgcgtggccaggcggtgggcatgtcccccgcggcgcacatcgccgcgtacaagatctgctggaagtccggctgctacgactccgacatcctcgccgccatggacgaggccgtcgcggacggcgtcgacgtcatatccctctccgtcggcgccggcggctacgccccgagcttcttccgcgactccatcgccatcggctccttccacgccgttagcaagggcatcgtggtgtccgcgtccgccggcaactccggccccggcgagtacaccgcgacgaacatcgcgccatggatactgaccgtcggcgcatctaccatcgaccgcgaattcccggctgatgtggttctaggcaacggtcaggtctacggcggcgtgtccctgtactccggcgaacccctgaactccacactgctcccggtggtgtacgccggcgactgcgggtctcggctttgcataatcggcgagctcgatccagcgaaggtttccggcaagatcgttctgtgtgagcgtgggagcaacgcccgtgtggcgaaaggcggggcagtgaaggtggccggcggtgccggcatgattctggtgaacacggcggagagcggcgaggagctggttgccgactcccacctcgtcccggcgacaatggtggggcagaaattcggcgacaagatcaagtactacgtccagagcgatccgtcgccgacggcgaccatcgtgttccggggcacggtcatcgggaagtcgccgtccgcgccgcgcgtcgcggcgttctcgagccggggccccaactaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgcggcgtggacaggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgctccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggcgtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgacgccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgtgtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggctactccccctccatcatctccctcttcacaacagacggctccgtcgccaactgttcgacgaaattcccccgcaccggggacctcaactaccccgccttcgccgtcgtcctatcctcctacaaagattcagtcacctaccacagggtggtgcgcaacgtcggcagcaacgccaatgccgtctacgaagccaagatcgacagcccgtccggtgtggatgtcacggtgagcccaagcaagctggtgttcgacgagagccaccagagcctgtcctacgacatcaccatcgccgcgtcgggtaacccggtgatcgtcgacaccgagtacaccttcgggtcggtcacctggagcgacggcgtgcacgacgtcactagccccatcgccgtgacatggccgtcgaacggccgagcagcatccatgtag
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| Protein seq | MATLRHLAAVLLILFAAASPAAAAAREQSTYILHLAPEHPALRATRVGGGGGAVFLGRLLRLPRHLRAPRPRLLYSYAHAATGVAARLTPEQAAHVEAQPGVLAVHPDQARQLHTTHTPAFLHLTQASGLLPAAAAAAAASGGASSPIVGVLDTGIYPIGRGSFAPTDGLGPPPASFSGGCVSTASFNASAYCNNKLIGAKFFYKGYEAALGHAIDETEESKSPLDTEGHGTHTASTAAGSPVTGAGFFDYARGQAVGMSPAAHIAAYKICWKSGCYDSDILAAMDEAVADGVDVISLSVGAGGYAPSFFRDSIAIGSFHAVSKGIVVSASAGNSGPGEYTATNIAPWILTVGASTIDREFPADVVLGNGQVYGGVSLYSGEPLNSTLLPVVYAGDCGSRLCIIGELDPAKVSGKIVLCERGSNARVAKGGAVKVAGGAGMILVNTAESGEELVADSHLVPATMVGQKFGDKIKYYVQSDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGESAPTDLDIDPRRVEFNIISGTSMSCPHVSGLAALLRQAQPDWSPAAIKSALMTTAYNVDNSSAVIKDLATGTESTPFVRGAGHVDPNRALDPGLVYDAGTEDYVSFLCTLGYSPSIISLFTTDGSVANCSTKFPRTGDLNYPAFAVVLSSYKDSVTYHRVVRNVGSNANAVYEAKIDSPSGVDVTVSPSKLVFDESHQSLSYDITIAASGNPVIVDTEYTFGSVTWSDGVHDVTSPIAVTWPSNGRAASM |
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| Function | Subtilisin-like protease SBT1.4 [UniProtKB/Swiss-Prot:Q9LVJ1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0035760 | OsCMeo_02g0035760.01 | Chr02 | 33576239 | 33578905 | - | NAM | ||
| CDS seq | atggctaccctccgccatctcgccgccgtgctcctcatcctcttcgccgccgcgtcgccggcggcggcggccgcgagagagcagtcgacgtacatcctccacctcgcgcccgagcacccggcgctcagggccacgcgcgtcggcggcggcggcggcgccgtgttcctcggccgcctccttcgcctcccgcgccatctgcgcgcaccgcggccacggttgctctactcctacgcgcacgcagcgacgggggtcgcggcgcgcctcacccccgaacaggcggcgcacgtcgaggcgcagcctggggtgctcgccgtccaccccgaccaggcgcgccagctgcacaccacccataccccggcgttcctccaccttacccaggcttccgggctcctgcccgccgccgccgccgccgccgccgcctccggtggcgcgtcgtcacccatcgtcggggtgctcgacaccgggatctaccccatcggccgcggctccttcgcgcccaccgacgggctcggcccgccgcccgcgtccttctccggcggatgcgtctccaccgcctccttcaacgcctccgcctactgcaacaacaagctcatcggcgcaaagttcttctacaagggatacgaggctgctctcggccacgccatcgatgagacggaggagtccaagtcgccactggacaccgagggccacgggacccacaccgcctccaccgccgcagggtcgccggtgaccggcgccgggttcttcgactacgcgcgtggccaggcggtgggcatgtcccccgcggcgcacatcgccgcgtacaagatctgctggaagtccggctgctacgactccgacatcctcgccgccatggacgaggccgtcgcggacggcgtcgacgtcatatccctctccgtcggcgccggcggctacgccccgagcttcttccgcgactccatcgccatcggctccttccacgccgttagcaagggcatcgtggtgtccgcgtccgccggcaactccggccccggcgagtacaccgcgacgaacatcgcgccatggatactgaccgtcggcgcatctaccatcgaccgcgaattcccggctgatgtggttctaggcaacggtcaggtctacggcggcgtgtccctgtactccggcgaacccctgaactccacactgctcccggtggtgtacgccggcgactgcgggtctcggctttgcataatcggcgagctcgatccagcgaaggtttccggcaagatcgttctgtgtgagcgtgggagcaacgcccgtgtggcgaaaggcggggcagtgaaggtggccggcggtgccggcatgattctggtgaacacggcggagagcggcgaggagctggttgccgactcccacctcgtcccggcgacaatggtggggcagaaattcggcgacaagatcaagtactacgtccagagcgatccgtcgccgacggcgaccatcgtgttccggggcacggtcatcgggaagtcgccgtccgcgccgcgcgtcgcggcgttctcgagccggggccccaactaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgcggcgtggacaggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgctccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggcgtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgacgccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgtgtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggctactccccctccatcatctccctcttcacaacagacggctccgtcgccaactgttcgacgaaattcccccgcaccggggacctcaactaccccgccttcgccgtcgtcctatcctcctacaaagattcagtcacctaccacagggtggtgcgcaacgtcggcagcaacgccaatgccgtctacgaagccaagatcgacagcccgtccggtgtggatgtcacggtgagcccaagcaagctggtgttcgacgagagccaccagagcctgtcctacgacatcaccatcgccgcgtcgggtaacccggtgatcgtcgacaccgagtacaccttcgggtcggtcacctggagcgacggcgtgcacgacgtcactagccccatcgccgtgacatggccgtcgaacggccgagcagcatccatgtag
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| Protein seq | MATLRHLAAVLLILFAAASPAAAAAREQSTYILHLAPEHPALRATRVGGGGGAVFLGRLLRLPRHLRAPRPRLLYSYAHAATGVAARLTPEQAAHVEAQPGVLAVHPDQARQLHTTHTPAFLHLTQASGLLPAAAAAAAASGGASSPIVGVLDTGIYPIGRGSFAPTDGLGPPPASFSGGCVSTASFNASAYCNNKLIGAKFFYKGYEAALGHAIDETEESKSPLDTEGHGTHTASTAAGSPVTGAGFFDYARGQAVGMSPAAHIAAYKICWKSGCYDSDILAAMDEAVADGVDVISLSVGAGGYAPSFFRDSIAIGSFHAVSKGIVVSASAGNSGPGEYTATNIAPWILTVGASTIDREFPADVVLGNGQVYGGVSLYSGEPLNSTLLPVVYAGDCGSRLCIIGELDPAKVSGKIVLCERGSNARVAKGGAVKVAGGAGMILVNTAESGEELVADSHLVPATMVGQKFGDKIKYYVQSDPSPTATIVFRGTVIGKSPSAPRVAAFSSRGPNYRAPEILKPDVIAPGVNILAAWTGESAPTDLDIDPRRVEFNIISGTSMSCPHVSGLAALLRQAQPDWSPAAIKSALMTTAYNVDNSSAVIKDLATGTESTPFVRGAGHVDPNRALDPGLVYDAGTEDYVSFLCTLGYSPSIISLFTTDGSVANCSTKFPRTGDLNYPAFAVVLSSYKDSVTYHRVVRNVGSNANAVYEAKIDSPSGVDVTVSPSKLVFDESHQSLSYDITIAASGNPVIVDTEYTFGSVTWSDGVHDVTSPIAVTWPSNGRAASM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.709065 | 18.844717 | 7.980349 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0779200 | RBH | 10.383296 | 7.436372 | 4.021802 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g53860 | RBH | 6.562682 | 4.671289 | 0.966416 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0779200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0035800 | RBH | 1.434769 | 39.395775 | 3.419544 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0035900 | RBH | 1.220443 | 19.600317 | 3.777188 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0012040 | SBH | 0.0 | 0.0 | 2.073429 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035330 | RBH | 0.658179 | 0.953773 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0035460 | RBH | 29.021826 | 48.033516 | 8.559042 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0539400 | RBH | 38.903095 | 28.4907465 | 9.844907 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035300 | RBH | 0.906184 | 2.063126 | 1.211851 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0569800 | RBH | 19.9093875 | 20.3104325 | 10.7655415 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0035550 | RBH | 0.714694 | 0.546605 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0035370 | RBH | 3.560073 | 30.458927 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0035630 | RBH | 27.101957 | 40.856544 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0035580 | RBH | 2.583995 | 4.019353 | 1.975397 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035170 | RBH | 2.343774 | 18.428656 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G035840 | RBH | 0.656068 | 12.397671 | 4.503195 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0035550 | RBH | 9.064275 | 28.843355 | 4.405094 |
