Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0034640 | OGI:02090870 | 14/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:32713739-32725967 | ||||||||
| Gene Symbol | RAD54, OsRAD54, OsRad54 | ||||||||||
| DNA seq | tccatccatgattgcgtggagattagcagggttccaattcgtccaagacatcagtccttttcttcattgaacaaatgatgatccaccacaccacacaaaatcataccgggcaacagtccgaaggcatgcgggacaagggaattgaaggcatttgttcatgaaccgaataccaatgaacaagaaaaccgtacagtctggccgccttgcagggtgtaggccggtggtagctttcttgccctggattagggaccagcagtgcctgcaaagactagatgttgaggacctgaagaacacagtagatgatcccagaaagcgaccttccttacaaattgataagtatgctgtacaaggagaaagcgactccatggtaagatcactatagtgtagggtaacctctgctgaaagcatagaagtatgaaatgcaagcaaagaatcggaaaagttcacagaaatgccagaaagaatgattatttagagtaattatgtagtttggttaaaaaaaaaggaaatatatggggaaaaggttggcttatgccagtgatggaaatccagctcaaatgatggaatgctagaaactgaaattaaatggcgagtagagcaccaatgtaaaaatatccaaaatttatgctgtcagcattcaggtagaaacatgaattcggagttctttctaaccttgaagtaaaaagaagaagttaagagctctgttcaactgtacactgacacgcagttaccattagaaacactggatagcttaacaatgtccagaagtggaatcagatgggcaccaacaggtgaagaaggtaggtaccaaaatcatttgactgatactagacgggtttgttagtagtgtgagctggcgacatcgacctctcggaataggaccatgtgatccccaagaatcctcttcattttggttccatctccatgaccaaatgataacaagagtccttggtcctgtgcctccaacaagtcacaacggaccagtcaaagagttcttgttccacagtaatgcttgtcctatttgtaatagatcataactatttagcaattagcagtagggccatttttaaatgataacatgcttcatgatgcctcgcatagtaacacatgctagtaggtggactgtagtatgcttcagtggtaaactaatatgtagaaaaagaaagcaagcaataccacgcatcccaaatcataccaacattaaaattagaaatgtataacagtgtcaattatgcatgagaacaagttatatgtcaaaggtggagttgaaactgacaataattacacgtccaactatgcaacaaagacctaggtttaaggttcagttatgccttttcttgaatacacagaacaagtttcagttatgcatcatgtcaatggaaaaaacaactgggattgttagaaaagattaatacattgtatttttttcattttcaaattacaagtttataaataataatttgttaaacctacttacatgtaatgcacccagcctcaggtggagctttagttctctgagatatcaaactatgccccttttagcgctcaatgtgtaacaagatcctaacatgttgggagagacaaatgtattgaatagaatttgcacactggcgcccaaagattatggaactgtgaagattatgtgcccaatcttaaatcgcattagcaacaattaacagaagttgcgggccattttggaagaatggccataagattaaaccatgattcatggggagaaaagactaggttagaggctgccgttacaatttaacttgcacaaatatggtcaaagactcaaagtatagtacaagcaaagcttttgagatctagagtacccatgtgagcacatgaacagcaccgattcatttcttccagcaatgaattaacttttgtgactgcacatgtgagggatggaaatgattaatgaagaacagccccattgtgacttaacttactaccttaaatcctacagatctcaggggggagggggctaccatgagattttgttttttcccctgatgctacaaatctcataaacgtagtaattttgttacctatcagcaacagggccaaattctaaatagcaaaacatgagaaacacaactgaaaatagcaaagatatccaaattataagacattgtacttgtattttgatgggaattaagaaactctagccctgcataaggccataagcatgaaaggattattctaagatacaaaatggccgctaggctggatctaggagtacttgatttgactatactaaaaaggagagtggaacagtgcaaacgtcaagcttttattacaccatcttaaaagtgtgcctgtcacccacatggaaaggcctaaacaaatgacagctggagatgaaagcataccatccaagtggttggtctagttgcttgtcggaatatcaagcttaaatcttcctgttggtctcctatccttacggcagatctcactttttctgaacctttatttggctaatggctacaccctgacaacttcaagcatggggttacaattcccaaggccgtgagggagaagcatgtagtacaatcatagaaccaaacacattccaaaactacaggtagaacgtgagctaacaatgatctgagacatggagagttgtggaaagtgctttttagactaagaccacacattctcaaaacaacctaaaatttctaacactgcactagaatgccgaacttacattatatttcaagaatgcaagctcacaaatgccatgagttttgcttttttttggtgggggggcggggaaacaaatggcatgagttatatagaaagaacgcagaacccacatgatattgatgtataagaagtggaaatagaaagaacggaacatttggcagtaatatgaacaaaggtttagagcagtacagttctatccggtgctccttttctcttgaaacaatctgcaggtaacaacaatcatgttaattttctgaaccatctgatggaaagctcaagtaatggaaattttgcatactgatcttcatgttccactaataaaaattgttactgcaaatcaatgtaagataatgaggggattcctttagattacttgttatgcaaatcccaaattgtctgcggccagtgcttcagattgcttgttaatctaccaaattttatgcgttatttcacagtgaagaaagcttcagatggcctgttaactcacttgtatgcaatattcgcagtttcacaccgaacagaccattcagggacatgcagcattcacatgatataaacaaaatcagcagatgatgttatctgttcagacttgagttccaccacattcatacaaaatcatcatcagacgcatcagaaataacatgaagctttttagtttgttgatgatctgaagatgtgctggttttgttcatcccttgcaaacagtttggcagcattcttctggacttagttgggaatttcatagacgaattctttaaattgaatcccatcatcttcagattttttccaagtagagattgccgttcggttccaggtacattagaagaattgatttttcccacttctttttctgcattaacagtcacttcatgtgttcgatgagttgcagctcgcgccatagattcaactggaacaagtttcccatcgatctgatttgtgaaaacaaaagaaacctgcaaaagtgcatgccatttgttaacagttgccagaatttcttgaaaatcaaactctatatttcAaaaaaaaaaatccttgatatcagataaaggttatttaactgctaaaaggacagcttcgcaggcaagcattttcttctttagaaatttagatatgtgccagttcatattgaatgctgttaatacatgacagtcaagttttttcctcaagaaatggcactagatagtgaccactctttgaaaaattaaattatggataattcaagaacataacgccccttcctccttactcatccatatggagtcttccctcatccattactaccaatctgctaggttcaaattactctattttcaagctaaacctagtcctgcaagcttgagataggacatttggcaaattcaaatatgtaatttttcatccttatcttggcctattatgaactgctaagtttggaacgactgtggtggaccagctaatacacacagcgtgcacagacatgtcagagctgtcacttcataggcaaggagtgttactttgagatctatcatatgatacaatggtggatggtgaatagtggatgggctgccattctgccaagaggcactttggagcagcatatataaatcccaccacccccccccccccccccccccgcccccaaccctctttcttttctgttttatcatgtaaatataatgaagatagtaaaaaactaaaaatgaacaagtggaagagggagaaacttattatgggggacaagtatgaaattgaacttttctatagataagatgtaagatgcaaatgcattgaggacatcacctcatcaccagaagaacactggagtatagtatcaggtacagttgatggatcagaatgatggccccaacttcctaaatcttcttcagaaggacttccaatctgaaaaggatgtaaccctgagttttgaagcagctagccaactacagtattaattagatgagtaaatttcacaaaactacatgttttatggttcaagttgcagaaaaccacacacattttgacacttggcaattaagtacatatattttagtagtttagtttcacaaaaccacactattgatgaatggattcacccatgagatgatgtggttgttccatctaggatggggacgtggcatcctattaatttcgtgtgatggctagtaataggatgccatgtcctcgtcctaggtgaaacatccacgtcatctcgcgagtgaatcaattcatcgatagtgtggttttgtgaaactacacaaccaaaatatatgtacttaagtgccaagtgtcaaaatgtatgtggttttctgcaacttggaccacaaaacgtgtagttttgtgaaatttactctaattagattaaaagttttgaagcagctagccaactacagtattaattagattaaaaataaaaagggtgtcacggactacctgttgattcgaactattcattttctgcacacatccagagatcgctccaaatccaccaatatcaatgtaactgttctctcctgagttagaagcctcatgctcagtggctgctgaatcaaatttgctaccatcgagaaccatacatccatccttgttacagcgattgcacttcaaattttcatgtatttcagacctgcgtcaccaaatgaaagtaagaaatccccacaaaaaaaagtaagaaacaatatgacacagaatatcagctatggtactgcatttatattaaggtaatgaaacaattgatacttgcagcttcaaaattgaacattttaggcaggcttttttatagttgctgccatattatctacagaaaaaaaaatgccccctctgtaaagggaagaaatggtcgtgagataatgaatgaaattgacaatgcccaactttttacatactaatattgcagcattcttgatcttaaaaacaattgtctgtgaaagtgatgctaatagtagtacatacgtataactgtctaagactggcagctgacaccacaatattctccaaataaatgaaaaattgagttgataaaaaatgtgcattggttgatggttactcagaaaagagaacaattctaatttctttttcccaaccagttcactcaattatccaccaggtatatccaattttatcatgtgttatatggttccgttggtttatgggatgctttcattaatgccttcatactagcaataagttctcaaaatatgaacataaataaagcccggaaacaagaaattaaagagtcccacaattcaaatgaacataattcacctgatttgttcatggaaggtaaaaagatcacgcagatcttctgttgaaagagaactcccctgttaaagaagatttgaatacagtagacttaacactaaaaagaattaaagaaagcaaataatcagtccaaacagataaacctgcattttgccatctgcttgttcctgctgaataactttttggagaccttctttcgacatctgacgctgatatacctatatacgaatgtcagcacaagaaagtagctagaaactcagcattcttccattggacaattaaaaaaaaagcgaacaatatctggaagtataagattcactggcaaccttctcctcaatggttcctgtgcttaagaacctgtatatgtacactctctttttttgtccatctctccatactctagcagcagcctttgtaaaatggcgatagatgaaaacaggtcagaccagacaaggtttggagttacaagaaccttcacaaggtgatgaagcagagatgcagagacattgacctgcttatcattggcagggttccaatcgggatcaaagagaatcaatcgatttccaccaaccaaattaagcccacagccacctgccttgctactaagtagaaagacaaactcatcctgccaaaaagacatatatagttgtatgttcaaatttggaacagttcttcaggacacagggcagattcttgatctaaaaaggggtatgtagcagattttacatactctggatggatcattgaattggttcaccaacttttgccttttattaatggatgttgctccatcaagcctaatatacgggtatctcctttcccgacataattgtgcaaacagatccaatgtctgaatttttagaagaaaacaatgatcaattattgttttgttcctaactgtataggtatcaaaagaggaaaataatttacaataactactctattctcatgtatcaagaaaatacattctatgcagtttaaaagcgcagtacatgctcaactactgatttgagataattatggagaatgagccatacatagcagaggtaggcactaagatgtggagaaaataaggtcatgggtaaaatcaagcgcttcgaaatatattattttgacagctatagaaggaagccaggcatatatattaaaatgatgtaccacaaaacctgacctgggtataatttgatacaagaacaatacgatcatcagttttcagacggaggtgccccagtaatctagctaagacatgcattttgccagacagttctacccacattcctcctccaccggtccatgatccagatcttgcacaaaattagaagttgctataagttgggcgagctaattttgaagctagttagaaagtgtgaaataccttcccgaaaacagttcaggaggaaaaaagcgcaggcagtcgtcaaaaccagagccccctgaattattactttttatggtgtcatagatcagctgcgatacaaatatagtcaaacaacaaacatcatgtatcgtgcttattacaacccaaaagttgaaactataacatgcaggatggctagtagcaacagtgtcacaagaaacagtttcccagagattctttgtaaccattatgtcatctaacttcctttatgcaagataatcaagaaaggaaaatagtgagacttcagacttggcccgtgctaattttgcatattacaaggattatatattcaagttacaacactgtcaatctgagcaggacacatgacagaattatcatgacaaaaataataataattttgtttcacattgaaaaaaataccaatgaggagccttttcttcaaaatctattacttccagtttttcatgcaggataccacatggtaacaataaggagtttgcaatgctgtcagagttttattttgtatggaagtgactaagagagatgatagtagaagtaataagattgttaatgaactttgtaggaatatcactgaagttactatcgacgaaacagcgagaaatgcatttctagtgacgcattaaaattatttacctttggatggttgcatagcttcttaagagcagtaatataagccaaaactttggattgctttgttccttcagatatcaagcgtttaacctgaaaagggcaaataatacagtgttgtaggtatagtgcctactaaacaaaatgtttggacttggaactatgtgatgttaggcactcacattttttgaatgtatgaagtggttgtacagcgcagtttgcaaagcagtcaacttgcagcacactacttcaacgatctgtgtataagcattaagcaatgctaaggcagaaaaatcatttgaacttccaaaaggaaccttataaaataagaggaatacagttttcaaaataaggcctacaagaccgcatagaaggaacatgcgccccaaccttgtacgactatgctgtataagcactagaagatgagttgaccacattttagaacctcagatagataaatgttctatagttctttcaatcaaaggtgcaacgaacaatatagggcaaaacttaactaaacagaaaattcaaagagttcaactaaatatatgagcatacctttggtggcaagtgattggataacagggcattcgtccgtctcaatataaactggatatcatcaagaaagcatcaaaacatgattaatgtctggttatattaaaacagaaggaaatacgtcaaaacaacttaaaaggcgcaagacatcataacccatgaatcataaacatgataaaaataatcatgttggtgaacaggcttcatcagaaggacaagtcttaccagatttacttttgcactgagctctgcagatctctcagatcccaagttcttttcttctgcacttgctgtgggctctcttccgcaaatgattggtgccttcagtcaggggcaggtaatatgagagataaatcaaagaaatattgggtgcacatctcacatgaacataggcacacagataaacaaaaaggaaatccttggactaatgaactctaatattttcctcccaatatactaactcatatttttgcagtatatcttgattcgtattaacttcaatacttacttcataatatctgcggaaatatgtagcatcccccagaactcctgggtttgtgaaatttaccattgaaaagaactcctccagatcattctgcaggaaaaaaattgtatcgattgacattgaaaacatttgttccattcaagaaagaaagacagaacaaaacaggaaagctaaaattacctgcattggggtgcctgataacaggatacgccgtttacaaggaagggcagccaaggcctacaacattatttgttgtgatgagaacatcaaggaggaatatatgtggtgcaaacaattcacgtgtataaaatattgagatgtaacaaatttacagttgatatactttattggttagggtctgatcatttttcagcctgtgggcctcgtcacatatgaggaggtcacagcttcccggcctttcaaattttgaagaatgcatgcggaatgtctcataagatacgatgagtacctgaagggaatgcataataaagatatattttcagaagacattaccatcaacttgtgtttgtttctgaactaaaatagcatagatgaaaatgaatgagaaaaggaacacctgaagacggctcaaaggttttaagaaactttcaattccagaaagaacatcagcgcgtgtgctttcacaaagagcaagcaactgcactctgccttttaaccatttaattatctcagattcccagttgctaactaaacttgtgggggttacgacgacagcccttttaaccattggcttagcatcaaatccttggcaaagaagggtgtatagtaaagttatcgactgtaaagtcttccccaatctggacaagtataaaacaagttaagcattatataataatgaaaaagaaaagacaagatggagggacccagcgtagtaccccatgtcatcagctaaaatgcaaccagatattccatcatcatttaacaacccagatacacaatcaaacataaactgaactccttccctgcatcagaacatcatcatgtaaattgtaaagagatgggtactgaactaaagtttaattatatcaccactttaataggtgttttttatgaagtgcctccaaataaacatatatggaagaggataatgcaaaaggagtatattacctttgatggggtcggaggtaacgtacaagcaagtgatcaaccttgattgcagaaaaattgctgttttccttgtcacgcccctcgggttgccacaaaatcaatggctctatgcctggtggaagggattcctcattttctacggaatcatcactagaaacagcaggtgattgtggaagaatatttgtaactgcaaatggctgcaccgaaccccatgggacaaatcttttacgagctgaaaggcgccgagcaagttgctcattattttcactgtatccattttgacagggaggtttgaatggctttcgagctattgctgccgcatcagaaaccgaaagaatacgtggaataagtggctgccttcttacaactagatttcccctgacataaaccggaaagaaagataatatgaaacaagacgaactgtttgtcactcaggctgtagtggatcgagtcgaaacaatctatctatctatctatctatctcttctcctatattataaagatagctcgaaaagaagccatcacccaccacattcgctgtgaaggtctagagattgctacattaattggagaaaaaaataaaacctaagccattagatcatggtgggaccaaattatagcagtgtagattgataggaacagttgtatacaaattacaattgtatctatagaaacagaatgtaagagttttatattaaacccaattctacttttaatatctatataattgcacaggaaatcccccagttttgtttatgtgaagaaagttaaaggcatttgacaaatttgaagtttacagtatacaggtaaaaaaggttgaagtgaatactagcatcatatcgcatggagcaaggttgttccggacttccagtgtccaaaagtcaactggccaaatacagtgatattggtggactccaatagatcacatgaacaatgtgtactagtcactgtcatgcctatatccataatatacttttagaggtaatttataatgttgaattaaatgaatcctgttattcatgatttagtaaataatgcatgtttatctagccaaacggcctatgttacgctatcgacgttcagggtttcagggatttcactttgaacttcttcagcaaataaacccatcacaactcttagggtcgatccagggatacaaatgtgttctcccagtcagtggagtatagattccaactctaccattgcccagacaataaaaatgttattcgccaactacggtttataactattaccctaaatttatgaggaaatgaaccaaatgttaccagactagggtacctaaatcaaacaacatggggaagaaatgtaaacccaagctgggctgttggccttctgggaaaatgtccaatgtggaattgcatcaggaaccccaagacagagttccataacagtcgtaagcaactaagcgtacatcgaacaatctcgccaccatcaaaatctagatccgcacacatgcgagccctaggaatctattatggtgcgtcgacacgccacgatctcacgcacgtacacctcgaagaagaaatcaactaatctattagccgaaatgggctcttcccagcatacctgacgagggcatccacattctgcgatttcctctcccggtcgttcgctctcacgccgcgacacgcgctccgaactcgccgcccgccgccctcgccctcgccatcgccaatgtcgctcctacctccttcctcgtcgccgtcgccgtcgccgctgccactgccgctgccgccggccgagtcactactctcccccacgtagtcgtcatcctcctcctccgctccactccccacctccgactctgactccgattcgtcggcgtcggaggagacggcaacgatctcctcctcctcctcctcatcggcgacgcggctgatgcggttgcatttgctcgtcgaaggcatcgcctcacctccctcgagtgaatctgtggagattggcaccgaatcgtgtgggatttttcgcgtgcggattggggaattttggaagcggggcggcgggtttggagagcaggagatgcgctccaaaaaatttggcggtac
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| CDS seq | atgccttcgacgagcaaatgcaaccgcatcagccgcgtcgccgatgaggaggaggaggaggagatcgttgccgtctcctccgacgccgacgaatcggagtcagagtcggaggtggggagtggagcggaggaggaggatgacgactacgtgggggagagtagtgactcggccggcggcagcggcagtggcagcggcgacggcgacggcgacgaggaaggaggtaggagcgacattggcgatggcgagggcgagggcggcgggcggcgagttcggagcgcgtgtcgcggcgtgagagcgaacgaccgggagaggaaatcgcagaatgtggatgccctcgtcaggggaaatctagttgtaagaaggcagccacttattccacgtattctttcggtttctgatgcggcagcaatagctcgaaagccattcaaacctccctgtcaaaatggatacagtgaaaataatgagcaacttgctcggcgcctttcagctcgtaaaagatttgtcccatggggttcggtgcagccatttgcagttacaaatattcttccacaatcacctgctgtttctagtgatgattccgtagaaaatgaggaatcccttccaccaggcatagagccattgattttgtggcaacccgaggggcgtgacaaggaaaacagcaatttttctgcaatcaaggttgatcacttgcttgtacgttacctccgaccccatcaaagggaaggagttcagtttatgtttgattgtgtatctgggttgttaaatgatgatggaatatctggttgcattttagctgatgacatgggattggggaagactttacagtcgataactttactatacacccttctttgccaaggatttgatgctaagccaatggttaaaagggctgtcgtcgtaacccccacaagtttagttagcaactgggaatctgagataattaaatggttaaaaggcagagtgcagttgcttgctctttgtgaaagcacacgcgctgatgttctttctggaattgaaagtttcttaaaacctttgagccgtcttcaggtactcatcgtatcttatgagacattccgcatgcattcttcaaaatttgaaaggccgggaagctgtgacctcctcatatgtgacgaggcccacaggctgaaaaatgatcagaccctaaccaataaagccttggctgcccttccttgtaaacggcgtatcctgttatcaggcaccccaatgcagaatgatctggaggagttcttttcaatggtaaatttcacaaacccaggagttctgggggatgctacatatttccgcagatattatgaagcaccaatcatttgcggaagagagcccacagcaagtgcagaagaaaagaacttgggatctgagagatctgcagagctcagtgcaaaagtaaatctgtttatattgagacggacgaatgccctgttatccaatcacttgccaccaaagatcgttgaagtagtgtgctgcaagttgactgctttgcaaactgcgctgtacaaccacttcatacattcaaaaaatgttaaacgcttgatatctgaaggaacaaagcaatccaaagttttggcttatattactgctcttaagaagctatgcaaccatccaaagctgatctatgacaccataaaaagtaataattcagggggctctggttttgacgactgcctgcgcttttttcctcctgaactgttttcgggaagatctggatcatggaccggtggaggaggaatgtgggtagaactgtctggcaaaatgcatgtcttagctagattactggggcacctccgtctgaaaactgatgatcgtattgttcttgtatcaaattatacccagacattggatctgtttgcacaattatgtcgggaaaggagatacccgtatattaggcttgatggagcaacatccattaataaaaggcaaaagttggtgaaccaattcaatgatccatccagagatgagtttgtctttctacttagtagcaaggcaggtggctgtgggcttaatttggttggtggaaatcgattgattctctttgatcccgattggaaccctgccaatgataagcaggctgctgctagagtatggagagatggacaaaaaaagagagtgtacatatacaggttcttaagcacaggaaccattgaggagaaggtatatcagcgtcagatgtcgaaagaaggtctccaaaaagttattcagcaggaacaagcagatggcaaaatgcaggggagttctctttcaacagaagatctgcgtgatctttttaccttccatgaacaaatcaggtctgaaatacatgaaaatttgaagtgcaatcgctgtaacaaggatggatgtatggttctcgatggtagcaaatttgattcagcagccactgagcatgaggcttctaactcaggagagaacagttacattgatattggtggatttggagcgatctctggatgtgtgcagaaaatgaatagttcgaatcaacaggtagtttcttttgttttcacaaatcagatcgatgggaaacttgttccagttgaatctatggcgcgagctgcaactcatcgaacacatgaagtgactgttaatgcagaaaaagaagtgggaaaaatcaattcttctaatgtacctggaaccgaacggcaatctctacttggaaaaaatctgaagatgatgggattcaatttaaagaattcgtctatgaaattcccaactaagtccagaagaatgctgccaaactgtttgcaagggatgaacaaaaccagcacatcttcagatcatcaacaaactaaaaagcttcatgttatttctgatgcgtctgatgatgattttgtatga
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| Protein seq | MPSTSKCNRISRVADEEEEEEIVAVSSDADESESESEVGSGAEEEDDDYVGESSDSAGGSGSGSGDGDGDEEGGRSDIGDGEGEGGGRRVRSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMVLDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQVVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVGKINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQTKKLHVISDASDDDFV |
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| Function | DNA repair and recombination protein RAD54 [UniProtKB/Swiss-Prot:A4PBL4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0034640 | OsCMeo_02g0034640.01 | Chr02 | 32713739 | 32725967 | - | NAM | ||
| CDS seq | atgccttcgacgagcaaatgcaaccgcatcagccgcgtcgccgatgaggaggaggaggaggagatcgttgccgtctcctccgacgccgacgaatcggagtcagagtcggaggtggggagtggagcggaggaggaggatgacgactacgtgggggagagtagtgactcggccggcggcagcggcagtggcagcggcgacggcgacggcgacgaggaaggaggtaggagcgacattggcgatggcgagggcgagggcggcgggcggcgagttcggagcgcgtgtcgcggcgtgagagcgaacgaccgggagaggaaatcgcagaatgtggatgccctcgtcaggggaaatctagttgtaagaaggcagccacttattccacgtattctttcggtttctgatgcggcagcaatagctcgaaagccattcaaacctccctgtcaaaatggatacagtgaaaataatgagcaacttgctcggcgcctttcagctcgtaaaagatttgtcccatggggttcggtgcagccatttgcagttacaaatattcttccacaatcacctgctgtttctagtgatgattccgtagaaaatgaggaatcccttccaccaggcatagagccattgattttgtggcaacccgaggggcgtgacaaggaaaacagcaatttttctgcaatcaaggttgatcacttgcttgtacgttacctccgaccccatcaaagggaaggagttcagtttatgtttgattgtgtatctgggttgttaaatgatgatggaatatctggttgcattttagctgatgacatgggattggggaagactttacagtcgataactttactatacacccttctttgccaaggatttgatgctaagccaatggttaaaagggctgtcgtcgtaacccccacaagtttagttagcaactgggaatctgagataattaaatggttaaaaggcagagtgcagttgcttgctctttgtgaaagcacacgcgctgatgttctttctggaattgaaagtttcttaaaacctttgagccgtcttcaggtactcatcgtatcttatgagacattccgcatgcattcttcaaaatttgaaaggccgggaagctgtgacctcctcatatgtgacgaggcccacaggctgaaaaatgatcagaccctaaccaataaagccttggctgcccttccttgtaaacggcgtatcctgttatcaggcaccccaatgcagaatgatctggaggagttcttttcaatggtaaatttcacaaacccaggagttctgggggatgctacatatttccgcagatattatgaagcaccaatcatttgcggaagagagcccacagcaagtgcagaagaaaagaacttgggatctgagagatctgcagagctcagtgcaaaagtaaatctgtttatattgagacggacgaatgccctgttatccaatcacttgccaccaaagatcgttgaagtagtgtgctgcaagttgactgctttgcaaactgcgctgtacaaccacttcatacattcaaaaaatgttaaacgcttgatatctgaaggaacaaagcaatccaaagttttggcttatattactgctcttaagaagctatgcaaccatccaaagctgatctatgacaccataaaaagtaataattcagggggctctggttttgacgactgcctgcgcttttttcctcctgaactgttttcgggaagatctggatcatggaccggtggaggaggaatgtgggtagaactgtctggcaaaatgcatgtcttagctagattactggggcacctccgtctgaaaactgatgatcgtattgttcttgtatcaaattatacccagacattggatctgtttgcacaattatgtcgggaaaggagatacccgtatattaggcttgatggagcaacatccattaataaaaggcaaaagttggtgaaccaattcaatgatccatccagagatgagtttgtctttctacttagtagcaaggcaggtggctgtgggcttaatttggttggtggaaatcgattgattctctttgatcccgattggaaccctgccaatgataagcaggctgctgctagagtatggagagatggacaaaaaaagagagtgtacatatacaggttcttaagcacaggaaccattgaggagaaggtatatcagcgtcagatgtcgaaagaaggtctccaaaaagttattcagcaggaacaagcagatggcaaaatgcaggggagttctctttcaacagaagatctgcgtgatctttttaccttccatgaacaaatcaggtctgaaatacatgaaaatttgaagtgcaatcgctgtaacaaggatggatgtatggttctcgatggtagcaaatttgattcagcagccactgagcatgaggcttctaactcaggagagaacagttacattgatattggtggatttggagcgatctctggatgtgtgcagaaaatgaatagttcgaatcaacaggtagtttcttttgttttcacaaatcagatcgatgggaaacttgttccagttgaatctatggcgcgagctgcaactcatcgaacacatgaagtgactgttaatgcagaaaaagaagtgggaaaaatcaattcttctaatgtacctggaaccgaacggcaatctctacttggaaaaaatctgaagatgatgggattcaatttaaagaattcgtctatgaaattcccaactaagtccagaagaatgctgccaaactgtttgcaagggatgaacaaaaccagcacatcttcagatcatcaacaaactaaaaagcttcatgttatttctgatgcgtctgatgatgattttgtatga
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| Protein seq | MPSTSKCNRISRVADEEEEEEIVAVSSDADESESESEVGSGAEEEDDDYVGESSDSAGGSGSGSGDGDGDEEGGRSDIGDGEGEGGGRRVRSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMVLDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQVVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVGKINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQTKKLHVISDASDDDFV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0034640 | OsCMeo_02g0034640.02 | Chr02 | 32716409 | 32725967 | - | NAM | ||
| CDS seq | atgccttcgacgagcaaatgcaaccgcatcagccgcgtcgccgatgaggaggaggaggaggagatcgttgccgtctcctccgacgccgacgaatcggagtcagagtcggaggtggggagtggagcggaggaggaggatgacgactacgtgggggagagtagtgactcggccggcggcagcggcagtggcagcggcgacggcgacggcgacgaggaaggaggtaggagcgacattggcgatggcgagggcgagggcggcgggcggcgagttcggagcgcgtgtcgcggcgtgagagcgaacgaccgggagaggaaatcgcagaatgtggatgccctcgtcaggggaaatctagttgtaagaaggcagccacttattccacgtattctttcggtttctgatgcggcagcaatagctcgaaagccattcaaacctccctgtcaaaatggatacagtgaaaataatgagcaacttgctcggcgcctttcagctcgtaaaagatttgtcccatggggttcggtgcagccatttgcagttacaaatattcttccacaatcacctgctgtttctagtgatgattccgtagaaaatgaggaatcccttccaccaggcatagagccattgattttgtggcaacccgaggggcgtgacaaggaaaacagcaatttttctgcaatcaaggttgatcacttgcttgtacgttacctccgaccccatcaaagggaaggagttcagtttatgtttgattgtgtatctgggttgttaaatgatgatggaatatctggttgcattttagctgatgacatgggattggggaagactttacagtcgataactttactatacacccttctttgccaaggatttgatgctaagccaatggttaaaagggctgtcgtcgtaacccccacaagtttagttagcaactgggaatctgagataattaaatggttaaaaggcagagtgcagttgcttgctctttgtgaaagcacacgcgctgatgttctttctggaattgaaagtttcttaaaacctttgagccgtcttcaggtactcatcgtatcttatgagacattccgcatgcattcttcaaaatttgaaaggccgggaagctgtgacctcctcatatgtgacgaggcccacaggctgaaaaatgatcagaccctaaccaataaagccttggctgcccttccttgtaaacggcgtatcctgttatcaggcaccccaatgcagaatgatctggaggagttcttttcaatggtaaatttcacaaacccaggagttctgggggatgctacatatttccgcagatattatgaagcaccaatcatttgcggaagagagcccacagcaagtgcagaagaaaagaacttgggatctgagagatctgcagagctcagtgcaaaagtaaatctgtttatattgagacggacgaatgccctgttatccaatcacttgccaccaaagatcgttgaagtagtgtgctgcaagttgactgctttgcaaactgcgctgtacaaccacttcatacattcaaaaaatgttaaacgcttgatatctgaaggaacaaagcaatccaaagttttggcttatattactgctcttaagaagctatgcaaccatccaaagctgatctatgacaccataaaaagtaataattcagggggctctggttttgacgactgcctgcgcttttttcctcctgaactgttttcgggaagatctggatcatggaccggtggaggaggaatgtgggtagaactgtctggcaaaatgcatgtcttagctagattactggggcacctccgtctgaaaactgatgatcgtattgttcttgtatcaaattatacccagacattggatctgtttgcacaattatgtcgggaaaggagatacccgtatattaggcttgatggagcaacatccattaataaaaggcaaaagttggtgaaccaattcaatgatccatccagagatgagtttgtctttctacttagtagcaaggcaggtggctgtgggcttaatttggttggtggaaatcgattgattctctttgatcccgattggaaccctgccaatgataagcaggctgctgctagagtatggagagatggacaaaaaaagagagtgtacatatacaggttcttaagcacaggaaccattgaggagaaggtatatcagcgtcagatgtcgaaagaaggtctccaaaaagttattcagcaggaacaagcagatggcaaaatgcaggggagttctctttcaacagaagatctgcgtgatctttttaccttccatgaacaaatcaggtctgaaatacatgaaaatttgaagtgcaatcgctgtaacaaggatggatgtatggttctcgatggtagcaaatttgattcagcagccactgagcatgaggcttctaactcaggagagaacagttacattgatattggtggatttggagcgatctctggatgtgtgcagaaaatgaatagttcgaatcaacaggtagtttcttttgttttcacaaatcagatcgatgggaaacttgttccagttgaatctatggcgcgagctgcaactcatcgaacacatgaagtgactgttaatgcagaaaaagaagtgggaaaaatcaattcttctaatgtacctggaaccgaacggcaatctctacttggaaaaaatctgaagatgatgggattcaatttaaagaattcgtctatgaaattcccaactaagtccagaagaatgctgccaaactgtttgcaagggatgaacaaaaccagcacatcttcagatcatcaacaaactaaaaagcttcatgttatttctgatgcgtctgatgatgattttgtatga
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| Protein seq | MPSTSKCNRISRVADEEEEEEIVAVSSDADESESESEVGSGAEEEDDDYVGESSDSAGGSGSGSGDGDGDEEGGRSDIGDGEGEGGGRRVRSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMVLDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQVVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVGKINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQTKKLHVISDASDDDFV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr02 | 32716674 | 32716938 | - | OsCMeo_02g0034640.01 | OsCMeo_02g0034640.02,OsCMeo_02g0034640.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.325910 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0762800 | RBH | 0.0 | 0.0 | 0.192427 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g52510 | RBH | 0.0 | 0.0 | 0.044331 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0762800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0034670 | RBH | 0.0 | 0.0 | 0.561097 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0034780 | RBH | 0.0 | 0.425736 | 0.177175 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0034240 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0034310 | RBH | 0.0 | 0.000000 | 1.756759 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0525600 | SBH | 2.3926265 | 5.6228625 | 4.602994 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0034150 | RBH | 0.000000 | 0.000000 | 0.083636 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0555600 | SBH | 2.989287 | 0.9279515 | 7.9370305 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0034400 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0034230 | RBH | 0.000000 | 2.750655 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0034480 | RBH | 0.0 | 3.508923 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0034430 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0034020 | RBH | 0.000000 | 1.006919 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G034690 | RBH | 0.000000 | 0.851975 | 0.628697 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0034410 | RBH | 0.000000 | 0.000000 | 0.491481 |
