Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0033720 | OGI:02089010 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:32046327-32056611 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggaagaaccgaagaagattgccgtggcgtctccgtctccctcctcgccgtcacagcgcagccttgcgccaccgtcttcgtcgcacgccggattccaatctccccatcgcgccatccgctcctcctcctcctcctcaccacatgcccggctccacggcctcctaaccctgcggattccatcccattccccctcccgaggccgcccgagatgtactacgcgatgcggctgcgctgcctcctcacgcggccgccggtctccctcgccatctcggccagcgcaggcggcggcgagggatgcttcgccaggagattcggcgccgccgtggcgccgcggccgtggggcgcggggcggcggctgtgccggttctacggctcctcgaagggcggcgtgggcagcgccgaggcgaggagcgccgcggcggcggaggggagcagcgggcgatgcagcgagcaggagcacgcgaagctcggggagagggaccagcaggagtggctgagcggcgagaggttcctcactgattgcaagcggcgggagtcgccgttcctcaccagacgggagaggttccgcaacgagttcatgcgccgcgtcgtgccgtgggagaaggggaacctcacgtggcagaatttcccttactacgtcaagtatgacgcgcgcaccacctgttcggtactttgtttgagtgagtcacatcagttttctaacgacgagaaattgcgtttttacttaattttggatcgcaagtgagaatgcgaggcggctgctgagggagtgtacggcgtcccacctgcggcacaatggtgtcacatctgagtatggttctcgtttgcaatcctctggggggaggatattgctccagagcttaccaggtattgagcggacatgctgcagatactaagtgttatcaaatgcttgtgttgagacctatttaatgcaggaactgagctttacagggagagattagtaagagctctcgcacacgagttgcaggtgccgctgctggtcctggacagcagcgttctagctccatatgtaagatactgcacctttatacctatcaaatatataagagtggttgcaaacttaatgtaactcctaacttgtaggattatggggatgactattcagaaagtgacgaagaggatgaacatgatgagtcagaggacgaggaatctgatattgaagatgaaggtgatgaagattggacaagcaatggtgaggctaaaaccgatgaaagtgacgatgaggatgctctgaaatctgtggaagaactgaagaagtctgtggatcgcctcagaaaattggttccatgtactcttgaggaatttgccaaggttatattctgttagcctatccaacattccaaccataacgagaaataagtttttgtatttctcttctcacaaaatatttcataattttgtctgtttttctagaaactatgatttttcttattcaatataaaccatgcggcatcaattggtgtccttttccctgcaatatctgcaaacaataggtcattctaagtttccaacgttaaacaatctcatggaagtaatacaataacataagtaaaataccccgtgataaaaacataactttttatactaaaaatgtgtgtttcttccaacaactaaaaaacatttgtgttgtcattctagcatggacctgaatcataaccttatgcgctggttcttttatcctttcttacttgaagaaaattaagctagaataatgcattagtgttttccagtatctgccccgaatgctgagttttctttcacttgtatgtcttgttgatgatgcttcttcatttggttatgattctagagagttgctggcgcagaagaaggcacaacatcagaatcatctgaaagtcctgagtcatcagaggaagataaaaggccttaccaaaggggtatggtatttcattgagtactctattttaaatcaagttaaaattctctcttccaaactaccttatggttcaatggaaaaattggaactagttacttatttcaatgcctattatcaggagatagggtcaagtatgttggatcctcagaagcctttgaagcagatcagaggtgatcattagatgttggctcttttgctctttctatagtttttcatcatgacaacctttgatcttgcatcgagtataagcaattccgcagtgatttggattacctttcttgtttcgtagtttggcaccaaaaccttagctatttatttagttttcctgatttagaaattttaacatctagcaacacagggctccttatttctgaagttttgcaatcatatttaggtgtctctaagtggaaacgctccatgttcctattagaagttacaaagtttatgatgtgcatgcctgcacataattatgtattgcatgctacagggtgtgggtgcccacatgcatctgcttgtaattttcatgtctttacatgtggtgcacacaagaacatggtgggttgatttgtggtttagtcttgtgggtttgggtggattagtataagaaagtgagcagtaagtttacttatgttgagcttgcgcacgcacacaatggtatattatattttgtccactcgtattagtgaaacttgaaaaacaaactttacttctggttgtttgttatttctactacatgttagaaattacgccactatctactctttaccgtagtttgaagttgatgttcttcatgcaaacactgatttgtaccatatgtatcatatacaggatcattttagggaaagtacctactaaagatggctcaagaaatgcctatacctttattagtggcaggtgggtggatatatctttcccatgtgaaacaggataaaaatggttttggtagatctaaaacctcagggaggcattgctctctgtaattttgaatattttggaacttttgcaaatccgatcagttgaaatatattagcaaaagaccctatgctgcagttgcttaggagaactggtttctccatttgtctttttgatcctcttcatttcaagtggtgtttttcatagtttcttaaagcaaccaagctatacactctcttactgttctgtgtaaacttatcattaccatgaatttgtgaaacaagggtaatgtttctaccattgaaaattacaggactttatcaaagggacaacggggagaggtatatgagatcaatggggatcaagtcgcagtcatattcgaccctcttgcagagaagctgcatgatggtgataatgatgcaactagcaaggaggaaaatactgaggcatccatttactgggttgattgtatgcttctatcctttttcatgaacagttttgtgttcaagtatttgatttggaaatttcaggcgccttgacttcatctcgtttccttgtgcttagctcaggacattgttcatgaccatgatactgagtcagaagattggcatatcgcaattgaagcactttgcgaggtgatttatcaaacgatgtattgaattttggtgttacatacccccaacatttctattttgttgttggccaaccccatgtaataatttttacctgccttacatggttatgaatttaggttctgccatctctacagccagcaattgtctactttccagacagttcccagtggctatctagagcagttccaaaatcaaatcgcagagagtttatccaaaaggtagaggagatgtttgacaaacttactggaccagtagtaatgatatgtgggcagaacatattggaagcagaacccaaggacaaggataaggaacctgtaagctctgcaaacttctatgcatttgaatttaaccaataaaacagtttttgttagttcttatttctgttgtggacatgtacagccggcgctgatgttccacaatctctctcgcctgtcttcgctggtaattgcttgggatttagttcaaatcaattcatgtttattttctagaacaattttgctataatcactaatcacaaaacaacttcttcccttgtgctagcaagaccgtaagagtacatcaacaatacaggtctaaacattgtttgtttagttcctgcatccctttgaggatgcagtgcagtattctgataggttttgtcactttgttttcattgacgagcttggtttactatggctgtgcatagatttgtgaagttaacccttcattagtttctgaaaaggggtgcaaatgaaccagcttatttgcacaaaccaaccatcagcttatatgcattgttaaggaatatagactacctttacataaataggttattcctttacgtatttaggtctctagtactcctatgtattgcctccttggggctattatccaatacaagctatattcataatgcttggatctgttggatggagttgctgccagcactagcgaggatgttggattgatggctacaattcggatctttgctctgatgccatgttatggatatagcttgtattgaataataagcccaaggaggcaacatataggagtacaagagacctaaaaatgtaaaggaataacctctattagccacctttatattcttaggcatgacaggctgccaagtcagtaagatgcgcttataaccaccttatctgtagacgattaccgacgtttagtgctccctatagattgaatagagaatgtgggtcattgaatgattgcacatggtttactcctgcctgtggacatgctttttcttgtaacacaatcgcagttttggtacccaaactaaacgactttttagttccttataaatcataatttgttgtataaactatcaagagcatgccataaggtaaggatattgggatgctagttgtttagttgtaggaattatgattaaacctccttttcttttccatttgcactgttgaaaaaactaactcccttttctgacagtatctaactacttaagcaaaggtttccattttgtatttcacaactggcacttatttgaaatgtttatatgcagccatcatcactaaagcgattggtaggggggagaccaaaatactcaagatccagtggcatatcgaagctgttcacaaatagtcttatcgttcctcttcctgaggtttgtaccatttgctaatctagtttacaaagttatgttattcggaatgaacgattaagtaacatatgtgttgatgtcatgatggcgtttataattgaatcactgacttgcaatgcctagtgcatccgtactagtgagctttagcttggagggcctaccgcctgtgactttgtctctgtttacttacaggaagatgagcaacgacgaattttcaataaccagatcgaagaggatagaaaaattattatttcaaggcataaccttgttgaattgcacaaggtttggatgcaatgcttctgcttccagttatctgctgcctatgtcatgtagcattactgcttcctctcatgtaactaacagtaaatcatgattgatgaacacaggtacttcaagagcatgaactatcatgtgttgagcttctgcatgtgaaatctgatggtgttgttttaacaagacaaagtatgtctactcaatattttctgctcagacatgtgctgaattttcatatgatatcagttgttggcttttgttatgtgctggtgcattatagaaatagatagaaggaaagatcttttctttaaaaagttctttgggcttcctgccaactgttttgattagatgctgctttcatgttttgggtgattttttctatgcaattcccaattaagtcataggtttcattactgagtctatacatgtggtggtgctcctacatgtaaaaccagtggaatatggattttgaatcagtgaaagtttgaaaacttattctaggttactggttatagacttctagagttctagtcaggtggctgcatagggagatatcttaattatcctttgaaattaatgggtatgttgcaaataagttggaaggacaaaatacaacagcttacagccacttctaatctgctatggatgctaaattaaaatttattttgttcctcccttaccagctagtgtattgttgtctgcagaagcggaaaaggttgttggatgggctagaagtcattatctttcatcagcagttcttcctaacattaagggtgacagattaatcatcccccgtgagaggtacttcatttcaagatgatagttattgtactagggcactaggccaatttccttttgccaggtatttactctaattgttgcattttgtgaagtctggatgtggccattgaaaggctgaaggaacagggcattaaaactaagagaccctctcaaaatataaaggtatttagcttctatattccgcaagttgaccttttccacatctctattatctgccaccttcatagtttttatctgatagtcctactcctatccgaactcataagttccctaacttcagaatttggctaaagacgagtatgaacgcaatttcatttctgctgttgtccctcctgatgaaattggagtgaaatttgatgatattggggcacttgaggatgttaagaggacgctggatgagcttgttactcttccaatgaggagacctgaacttttctcccatgggaatttgttaagggtacgccttcgttttctgctaaacttattattatgactgttcactagctctgctgtatataccatgtgatcttgaacatccatttaggtcatcattgtcttctagaaagaaattactttattttggtatgagctcagaaagcgaggtgtgatggattgcaggaataatatattgttttcctccttgcatcagttttagactaatactttaaaatggtgttacatttgcataatctttccaaaagttcctttgtatttgagtcaacattgagtaccataatgtgtagtaatcacatggttttagaatggagatgttactcttactcaagtggtcctccgatggccagttgctatatcaggggaaaatgagattgtaaaaaaatgcctggtatttgaattgaccctaaaatatttgttaaagactctttacggaatcattatcagtatttcatggacttcaactagttgattctcttttgaatgttggacctatttctgatctcttaggttaaatatgttaaaatcatactataaatgacatacttatatcctgactgttcagcgctagtgcttatggtatttgccatgcaaggtggagttgatgatgcaagtatagcaatgtctataaacatcgtaagaaatacatgctgcctttcaaggcaaatagataaaactaaactgggatattctgcaattgaaagcatcatcctttcttcctatacatttgcaactcacttagtgcagttattgctacaaagaagtcactgcaagaagccacatcatcacttttctttgacatcctttaacggttcagattagcccatagtctttctaacctgatgagtccttttttggctgttaaattaatcattttctcagttccatatctaacaaatttgcaacagcactgtacgcactaatatcctgcagcaacgcacagggtgtcatctagtttcttactattttcctttggttcttgacaaattgttgcttagaattcagctatcttaatctgactattggatgccctagtaatttgttgtattcatcttattcgggatttaaacatacttgaattgagttagctgaatttttaatgtgacatggaccccttttcagccctgcaaaggtgttttgctctttgggcctcctggaacaggaaaaacactcctggcaaaggcacttgcaacagaagctggagcaaatttcatcagcataactggttctacactcacatcaaaggtaatttgatttgacttgttgctgttgcagtaaagctcttaaggatggcgtacttggtgtgacccagtaaattacaaacatcattcaactagttaaatttccatacttacctattagcttttagacaattttgaacacgactttagtgtgggacaactttttactagtcgccagctaagtcaacattttttttgacttttgccaaaagaacaggaagatggccaaaacaagaaactgacccctcagccatttttggctcatagaataaactttacatgtttgatttggatctgaaacttttctgtgcagatttatgtttcccatgaccaaaagggataaaaggtgaagcaaaacagtttctttttaaagttttacacacatgtagaatagacatatcaaaaatcaaaggataagtgaaacagtctgcatatacaattctagataaaagggcagtctatctacgggaccaacttgtcaacctatttaagatggcgaatttaagctttcaaaagatttgcttcgttttgtaacatcacacgccaaattgagacttctgagttcacatgtgaactgagtgggtcctgctttttcttaaaacattgattatacgaatgtagttgacaggttgaggccttttctcttatgttaaatgtctcctgctgctttgcatgaacaaatgaagctactgatgtgaatcctatcatatgcatgaggtctctgtatgtccctagattataccaaaggatcctcactctttagtcatttttgttagtgggtggttggggcatgggatgatagtggacaagcttgttttgattgaatgtatggtatgcataaatgcaggcagagtaggtggatgcaattttttagaatgctctcctaaaatgctatttgtgatgtttgcgtttcactctgcatcttatattcacggaaccaaataagtaaattttgagattctttagaagattcatcctcctgcactgtcccacatagataaaggtttatttcccaactgagcaccacttcaccgctctgttttctttgaacagtggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagctcccgttatcatatttgtggatgaggtatgtttacttaaatgaaacaaacaagtgcttatattcccctcctatgtgctttctcctggtatgatataatttagttttgacataacaggttgacagcttattaggtgcaagaggtggtgcatttgagcatgaagcaacaagaaggatgcggaacgaatttatggcagcttgggatggtctaaggtccaaagagagccagcgaatccttattcttggtgcgacaaatcgtccatttgatctagatgatgctgtaatacggcgtttacctagacggtaaatttacattcacactattgcttccaggatagtaatatggtgatctagcaagattttcattggttattgactttcatgatctacaggatatacgtggaccttccagatgcacagaaccgaatgaaaattctcaagattttacttgctaaagaaaacttggaatctgatttcagatttgatgaacttgccaattccactgaaggttattcaggaagtgatttgaaggtatcacatacaccaacgatcataatatcttttttcctgtggaaattggaattgttctggtccttcttttctgccatgtgagcaggcaatctgaatttccttttctgcagaacctatgtatagcttcagcatataggccagttcatgaacttttagaagaagaaaagaaggtaaacaattctataattatggaaattatgtggtctctcattttcactaactttaacatcttctgtagggaggtccgtgtagccaaaatacgggtctaagaccccttagacttgatgatttcattcaagcaaaagccaaggtattgcaaactgcaaacttaagattttttttcttttagcgcagttctctgcaagtagtattttgttcacattgattattatttcccccatttaggtaagcccgtctgtttcgtatgatgcgacgagcatgaacgaattaagaaaatggaacgaacagtatggtgaaggtggcagcaggacgagatcaccttttgggttcggcaactgacatactgtatacacatctgtactagtgattcttcaaccctgttgtatttgtaacaccaataggctgcctagtcacaggaggaggtctcccttttttatttagagctatttataacgttgcaatcattttgtaccatagaaaaatatctaatgaaatggcttcttttttaccttccataccggctggtgttatcattgtacaattatgagaagatcagaaatcaggttagatggactgaaaaggtcaaaaggagccataagtagctccgtctttgcttc
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| CDS seq | atgtactacgcgatgcggctgcgctgcctcctcacgcggccgccggtctccctcgccatctcggccagcgcaggcggcggcgagggatgcttcgccaggagattcggcgccgccgtggcgccgcggccgtggggcgcggggcggcggctgtgccggttctacggctcctcgaagggcggcgtgggcagcgccgaggcgaggagcgccgcggcggcggaggggagcagcgggcgatgcagcgagcaggagcacgcgaagctcggggagagggaccagcaggagtggctgagcggcgagaggttcctcactgattgcaagcggcgggagtcgccgttcctcaccagacgggagaggttccgcaacgagttcatgcgccgcgtcgtgccgtgggagaaggggaacctcacgtggcagaatttcccttactacgtcaatgagaatgcgaggcggctgctgagggagtgtacggcgtcccacctgcggcacaatggtgtcacatctgagtatggttctcgtttgcaatcctctggggggaggatattgctccagagcttaccaggaactgagctttacagggagagattagtaagagctctcgcacacgagttgcaggtgccgctgctggtcctggacagcagcgttctagctccatatgattatggggatgactattcagaaagtgacgaagaggatgaacatgatgagtcagaggacgaggaatctgatattgaagatgaaggtgatgaagattggacaagcaatggtgaggctaaaaccgatgaaagtgacgatgaggatgctctgaaatctgtggaagaactgaagaagtctgtggatcgcctcagaaaattggttccatgtactcttgaggaatttgccaagagagttgctggcgcagaagaaggcacaacatcagaatcatctgaaagtcctgagtcatcagaggaagataaaaggccttaccaaaggggagatagggtcaagtatgttggatcctcagaagcctttgaagcagatcagaggactttatcaaagggacaacggggagaggtatatgagatcaatggggatcaagtcgcagtcatattcgaccctcttgcagagaagctgcatgatggtgataatgatgcaactagcaaggaggaaaatactgaggcatccatttactgggacattgttcatgaccatgatactgagtcagaagattggcatatcgcaattgaagcactttgcgaggttctgccatctctacagccagcaattgtctactttccagacagttcccagtggctatctagagcagttccaaaatcaaatcgcagagagtttatccaaaaggtagaggagatgtttgacaaacttactggaccagtagtaatgatatgtgggcagaacatattggaagcagaacccaaggacaaggataaggaacctccggcgctgatgttccacaatctctctcgcctgtcttcgctgccatcatcactaaagcgattggtaggggggagaccaaaatactcaagatccagtggcatatcgaagctgttcacaaatagtcttatcgttcctcttcctgaggaagatgagcaacgacgaattttcaataaccagatcgaagaggatagaaaaattattatttcaaggcataaccttgttgaattgcacaaggtacttcaagagcatgaactatcatgtgttgagcttctgcatgtgaaatctgatggtgttgttttaacaagacaaaaagcggaaaaggttgttggatgggctagaagtcattatctttcatcagcagttcttcctaacattaagggtgacagattaatcatcccccgtgagagtctggatgtggccattgaaaggctgaaggaacagggcattaaaactaagagaccctctcaaaatataaagaatttggctaaagacgagtatgaacgcaatttcatttctgctgttgtccctcctgatgaaattggagtgaaatttgatgatattggggcacttgaggatgttaagaggacgctggatgagcttgttactcttccaatgaggagacctgaacttttctcccatgggaatttgttaaggaatggagatgttactcttactcaagtggtcctccgatggccagttgctatatcaggggaaaatgagattgtaaaaaaatgcctgccctgcaaaggtgttttgctctttgggcctcctggaacaggaaaaacactcctggcaaaggcacttgcaacagaagctggagcaaatttcatcagcataactggttctacactcacatcaaagtggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagctcccgttatcatatttgtggatgaggttgacagcttattaggtgcaagaggtggtgcatttgagcatgaagcaacaagaaggatgcggaacgaatttatggcagcttgggatggtctaaggtccaaagagagccagcgaatccttattcttggtgcgacaaatcgtccatttgatctagatgatgctgtaatacggcgtttacctagacggatatacgtggaccttccagatgcacagaaccgaatgaaaattctcaagattttacttgctaaagaaaacttggaatctgatttcagatttgatgaacttgccaattccactgaaggttattcaggaagtgatttgaagaacctatgtatagcttcagcatataggccagttcatgaacttttagaagaagaaaagaagggaggtccgtgtagccaaaatacgggtctaagaccccttagacttgatgatttcattcaagcaaaagccaaggtaagcccgtctgtttcgtatgatgcgacgagcatgaacgaattaagaaaatggaacgaacagtatggtgaaggtggcagcaggacgagatcaccttttgggttcggcaactga
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| Protein seq | MYYAMRLRCLLTRPPVSLAISASAGGGEGCFARRFGAAVAPRPWGAGRRLCRFYGSSKGGVGSAEARSAAAAEGSSGRCSEQEHAKLGERDQQEWLSGERFLTDCKRRESPFLTRRERFRNEFMRRVVPWEKGNLTWQNFPYYVNENARRLLRECTASHLRHNGVTSEYGSRLQSSGGRILLQSLPGTELYRERLVRALAHELQVPLLVLDSSVLAPYDYGDDYSESDEEDEHDESEDEESDIEDEGDEDWTSNGEAKTDESDDEDALKSVEELKKSVDRLRKLVPCTLEEFAKRVAGAEEGTTSESSESPESSEEDKRPYQRGDRVKYVGSSEAFEADQRTLSKGQRGEVYEINGDQVAVIFDPLAEKLHDGDNDATSKEENTEASIYWDIVHDHDTESEDWHIAIEALCEVLPSLQPAIVYFPDSSQWLSRAVPKSNRREFIQKVEEMFDKLTGPVVMICGQNILEAEPKDKDKEPPALMFHNLSRLSSLPSSLKRLVGGRPKYSRSSGISKLFTNSLIVPLPEEDEQRRIFNNQIEEDRKIIISRHNLVELHKVLQEHELSCVELLHVKSDGVVLTRQKAEKVVGWARSHYLSSAVLPNIKGDRLIIPRESLDVAIERLKEQGIKTKRPSQNIKNLAKDEYERNFISAVVPPDEIGVKFDDIGALEDVKRTLDELVTLPMRRPELFSHGNLLRNGDVTLTQVVLRWPVAISGENEIVKKCLPCKGVLLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAQNRMKILKILLAKENLESDFRFDELANSTEGYSGSDLKNLCIASAYRPVHELLEEEKKGGPCSQNTGLRPLRLDDFIQAKAKVSPSVSYDATSMNELRKWNEQYGEGGSRTRSPFGFGN |
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| Function | Protein MSP1 [UniProtKB/Swiss-Prot:P28737] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0033720 | OsCMeo_02g0033720.01 | Chr02 | 32046534 | 32056611 | + | NAM | ||
| CDS seq | atgtactacgcgatgcggctgcgctgcctcctcacgcggccgccggtctccctcgccatctcggccagcgcaggcggcggcgagggatgcttcgccaggagattcggcgccgccgtggcgccgcggccgtggggcgcggggcggcggctgtgccggttctacggctcctcgaagggcggcgtgggcagcgccgaggcgaggagcgccgcggcggcggaggggagcagcgggcgatgcagcgagcaggagcacgcgaagctcggggagagggaccagcaggagtggctgagcggcgagaggttcctcactgattgcaagcggcgggagtcgccgttcctcaccagacgggagaggttccgcaacgagttcatgcgccgcgtcgtgccgtgggagaaggggaacctcacgtggcagaatttcccttactacgtcaatgagaatgcgaggcggctgctgagggagtgtacggcgtcccacctgcggcacaatggtgtcacatctgagtatggttctcgtttgcaatcctctggggggaggatattgctccagagcttaccaggaactgagctttacagggagagattagtaagagctctcgcacacgagttgcaggtgccgctgctggtcctggacagcagcgttctagctccatatgattatggggatgactattcagaaagtgacgaagaggatgaacatgatgagtcagaggacgaggaatctgatattgaagatgaaggtgatgaagattggacaagcaatggtgaggctaaaaccgatgaaagtgacgatgaggatgctctgaaatctgtggaagaactgaagaagtctgtggatcgcctcagaaaattggttccatgtactcttgaggaatttgccaagagagttgctggcgcagaagaaggcacaacatcagaatcatctgaaagtcctgagtcatcagaggaagataaaaggccttaccaaaggggagatagggtcaagtatgttggatcctcagaagcctttgaagcagatcagaggactttatcaaagggacaacggggagaggtatatgagatcaatggggatcaagtcgcagtcatattcgaccctcttgcagagaagctgcatgatggtgataatgatgcaactagcaaggaggaaaatactgaggcatccatttactgggacattgttcatgaccatgatactgagtcagaagattggcatatcgcaattgaagcactttgcgaggttctgccatctctacagccagcaattgtctactttccagacagttcccagtggctatctagagcagttccaaaatcaaatcgcagagagtttatccaaaaggtagaggagatgtttgacaaacttactggaccagtagtaatgatatgtgggcagaacatattggaagcagaacccaaggacaaggataaggaacctccggcgctgatgttccacaatctctctcgcctgtcttcgctgccatcatcactaaagcgattggtaggggggagaccaaaatactcaagatccagtggcatatcgaagctgttcacaaatagtcttatcgttcctcttcctgaggaagatgagcaacgacgaattttcaataaccagatcgaagaggatagaaaaattattatttcaaggcataaccttgttgaattgcacaaggtacttcaagagcatgaactatcatgtgttgagcttctgcatgtgaaatctgatggtgttgttttaacaagacaaaaagcggaaaaggttgttggatgggctagaagtcattatctttcatcagcagttcttcctaacattaagggtgacagattaatcatcccccgtgagagtctggatgtggccattgaaaggctgaaggaacagggcattaaaactaagagaccctctcaaaatataaagaatttggctaaagacgagtatgaacgcaatttcatttctgctgttgtccctcctgatgaaattggagtgaaatttgatgatattggggcacttgaggatgttaagaggacgctggatgagcttgttactcttccaatgaggagacctgaacttttctcccatgggaatttgttaaggaatggagatgttactcttactcaagtggtcctccgatggccagttgctatatcaggggaaaatgagattgtaaaaaaatgcctgccctgcaaaggtgttttgctctttgggcctcctggaacaggaaaaacactcctggcaaaggcacttgcaacagaagctggagcaaatttcatcagcataactggttctacactcacatcaaagtggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagctcccgttatcatatttgtggatgaggttgacagcttattaggtgcaagaggtggtgcatttgagcatgaagcaacaagaaggatgcggaacgaatttatggcagcttgggatggtctaaggtccaaagagagccagcgaatccttattcttggtgcgacaaatcgtccatttgatctagatgatgctgtaatacggcgtttacctagacggatatacgtggaccttccagatgcacagaaccgaatgaaaattctcaagattttacttgctaaagaaaacttggaatctgatttcagatttgatgaacttgccaattccactgaaggttattcaggaagtgatttgaagaacctatgtatagcttcagcatataggccagttcatgaacttttagaagaagaaaagaagggaggtccgtgtagccaaaatacgggtctaagaccccttagacttgatgatttcattcaagcaaaagccaaggtaagcccgtctgtttcgtatgatgcgacgagcatgaacgaattaagaaaatggaacgaacagtatggtgaaggtggcagcaggacgagatcaccttttgggttcggcaactga
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| Protein seq | MYYAMRLRCLLTRPPVSLAISASAGGGEGCFARRFGAAVAPRPWGAGRRLCRFYGSSKGGVGSAEARSAAAAEGSSGRCSEQEHAKLGERDQQEWLSGERFLTDCKRRESPFLTRRERFRNEFMRRVVPWEKGNLTWQNFPYYVNENARRLLRECTASHLRHNGVTSEYGSRLQSSGGRILLQSLPGTELYRERLVRALAHELQVPLLVLDSSVLAPYDYGDDYSESDEEDEHDESEDEESDIEDEGDEDWTSNGEAKTDESDDEDALKSVEELKKSVDRLRKLVPCTLEEFAKRVAGAEEGTTSESSESPESSEEDKRPYQRGDRVKYVGSSEAFEADQRTLSKGQRGEVYEINGDQVAVIFDPLAEKLHDGDNDATSKEENTEASIYWDIVHDHDTESEDWHIAIEALCEVLPSLQPAIVYFPDSSQWLSRAVPKSNRREFIQKVEEMFDKLTGPVVMICGQNILEAEPKDKDKEPPALMFHNLSRLSSLPSSLKRLVGGRPKYSRSSGISKLFTNSLIVPLPEEDEQRRIFNNQIEEDRKIIISRHNLVELHKVLQEHELSCVELLHVKSDGVVLTRQKAEKVVGWARSHYLSSAVLPNIKGDRLIIPRESLDVAIERLKEQGIKTKRPSQNIKNLAKDEYERNFISAVVPPDEIGVKFDDIGALEDVKRTLDELVTLPMRRPELFSHGNLLRNGDVTLTQVVLRWPVAISGENEIVKKCLPCKGVLLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAQNRMKILKILLAKENLESDFRFDELANSTEGYSGSDLKNLCIASAYRPVHELLEEEKKGGPCSQNTGLRPLRLDDFIQAKAKVSPSVSYDATSMNELRKWNEQYGEGGSRTRSPFGFGN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0033720 | OsCMeo_02g0033720.02 | Chr02 | 32046534 | 32056568 | + | NAM | ||
| CDS seq | atgtactacgcgatgcggctgcgctgcctcctcacgcggccgccggtctccctcgccatctcggccagcgcaggcggcggcgagggatgcttcgccaggagattcggcgccgccgtggcgccgcggccgtggggcgcggggcggcggctgtgccggttctacggctcctcgaagggcggcgtgggcagcgccgaggcgaggagcgccgcggcggcggaggggagcagcgggcgatgcagcgagcaggagcacgcgaagctcggggagagggaccagcaggagtggctgagcggcgagaggttcctcactgattgcaagcggcgggagtcgccgttcctcaccagacgggagaggttccgcaacgagttcatgcgccgcgtcgtgccgtgggagaaggggaacctcacgtggcagaatttcccttactacgtcaatgagaatgcgaggcggctgctgagggagtgtacggcgtcccacctgcggcacaatggtgtcacatctgagtatggttctcgtttgcaatcctctggggggaggatattgctccagagcttaccaggaactgagctttacagggagagattagtaagagctctcgcacacgagttgcaggtgccgctgctggtcctggacagcagcgttctagctccatatgattatggggatgactattcagaaagtgacgaagaggatgaacatgatgagtcagaggacgaggaatctgatattgaagatgaaggtgatgaagattggacaagcaatggtgaggctaaaaccgatgaaagtgacgatgaggatgctctgaaatctgtggaagaactgaagaagtctgtggatcgcctcagaaaattggttccatgtactcttgaggaatttgccaagagagttgctggcgcagaagaaggcacaacatcagaatcatctgaaagtcctgagtcatcagaggaagataaaaggccttaccaaaggggagatagggtcaagtatgttggatcctcagaagcctttgaagcagatcagaggactttatcaaagggacaacggggagaggtatatgagatcaatggggatcaagtcgcagtcatattcgaccctcttgcagagaagctgcatgatggtgataatgatgcaactagcaaggaggaaaatactgaggcatccatttactgggacattgttcatgaccatgatactgagtcagaagattggcatatcgcaattgaagcactttgcgaggttctgccatctctacagccagcaattgtctactttccagacagttcccagtggctatctagagcagttccaaaatcaaatcgcagagagtttatccaaaaggtagaggagatgtttgacaaacttactggaccagtagtaatgatatgtgggcagaacatattggaagcagaacccaaggacaaggataaggaacctccatcatcactaaagcgattggtaggggggagaccaaaatactcaagatccagtggcatatcgaagctgttcacaaatagtcttatcgttcctcttcctgaggaagatgagcaacgacgaattttcaataaccagatcgaagaggatagaaaaattattatttcaaggcataaccttgttgaattgcacaaggtacttcaagagcatgaactatcatgtgttgagcttctgcatgtgaaatctgatggtgttgttttaacaagacaaaaagcggaaaaggttgttggatgggctagaagtcattatctttcatcagcagttcttcctaacattaagggtgacagattaatcatcccccgtgagagtctggatgtggccattgaaaggctgaaggaacagggcattaaaactaagagaccctctcaaaatataaagaatttggctaaagacgagtatgaacgcaatttcatttctgctgttgtccctcctgatgaaattggagtgaaatttgatgatattggggcacttgaggatgttaagaggacgctggatgagcttgttactcttccaatgaggagacctgaacttttctcccatgggaatttgttaaggccctgcaaaggtgttttgctctttgggcctcctggaacaggaaaaacactcctggcaaaggcacttgcaacagaagctggagcaaatttcatcagcataactggttctacactcacatcaaagtggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagctcccgttatcatatttgtggatgaggttgacagcttattaggtgcaagaggtggtgcatttgagcatgaagcaacaagaaggatgcggaacgaatttatggcagcttgggatggtctaaggtccaaagagagccagcgaatccttattcttggtgcgacaaatcgtccatttgatctagatgatgctgtaatacggcgtttacctagacggatatacgtggaccttccagatgcacagaaccgaatgaaaattctcaagattttacttgctaaagaaaacttggaatctgatttcagatttgatgaacttgccaattccactgaaggttattcaggaagtgatttgaagaacctatgtatagcttcagcatataggccagttcatgaacttttagaagaagaaaagaagggaggtccgtgtagccaaaatacgggtctaagaccccttagacttgatgatttcattcaagcaaaagccaaggtaagcccgtctgtttcgtatgatgcgacgagcatgaacgaattaagaaaatggaacgaacagtatggtgaaggtggcagcaggacgagatcaccttttgggttcggcaactga
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| Protein seq | MYYAMRLRCLLTRPPVSLAISASAGGGEGCFARRFGAAVAPRPWGAGRRLCRFYGSSKGGVGSAEARSAAAAEGSSGRCSEQEHAKLGERDQQEWLSGERFLTDCKRRESPFLTRRERFRNEFMRRVVPWEKGNLTWQNFPYYVNENARRLLRECTASHLRHNGVTSEYGSRLQSSGGRILLQSLPGTELYRERLVRALAHELQVPLLVLDSSVLAPYDYGDDYSESDEEDEHDESEDEESDIEDEGDEDWTSNGEAKTDESDDEDALKSVEELKKSVDRLRKLVPCTLEEFAKRVAGAEEGTTSESSESPESSEEDKRPYQRGDRVKYVGSSEAFEADQRTLSKGQRGEVYEINGDQVAVIFDPLAEKLHDGDNDATSKEENTEASIYWDIVHDHDTESEDWHIAIEALCEVLPSLQPAIVYFPDSSQWLSRAVPKSNRREFIQKVEEMFDKLTGPVVMICGQNILEAEPKDKDKEPPSSLKRLVGGRPKYSRSSGISKLFTNSLIVPLPEEDEQRRIFNNQIEEDRKIIISRHNLVELHKVLQEHELSCVELLHVKSDGVVLTRQKAEKVVGWARSHYLSSAVLPNIKGDRLIIPRESLDVAIERLKEQGIKTKRPSQNIKNLAKDEYERNFISAVVPPDEIGVKFDDIGALEDVKRTLDELVTLPMRRPELFSHGNLLRPCKGVLLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAQNRMKILKILLAKENLESDFRFDELANSTEGYSGSDLKNLCIASAYRPVHELLEEEKKGGPCSQNTGLRPLRLDDFIQAKAKVSPSVSYDATSMNELRKWNEQYGEGGSRTRSPFGFGN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0033720 | OsCMeo_02g0033720.03 | Chr02 | 32046327 | 32056509 | + | IsoSeq | ||
| CDS seq | gaagaaccgaagaagattgccgtggcgtctccgtctccctcctcgccgtcacagcgcagccttgcgccaccgtcttcgtcgcacgccggattccaatctccccatcgcgccatccgctcctcctcctcctcctcaccacatgcccggctccacggcctcctaaccctgcggattccatcccattccccctcccgaggccgcccgagatgtactacgcgatgcggctgcgctgcctcctcacgcggccgccggtctccctcgccatctcggccagcgcaggcggcggcgagggatgcttcgccaggagattcggcgccgccgtggcgccgcggccgtggggcgcggggcggcggctgtgccggttctacggctcctcgaagggcggcgtgggcagcgccgaggcgaggagcgccgcggcggcggaggggagcagcgggcgatgcagcgagcaggagcacgcgaagctcggggagagggaccagcaggagt
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| Protein seq | EEPKKIAVASPSPSSPSQRSLAPPSSSHAGFQSPHRAIRSSSSSSPHARLHGLLTLRIPSHSPSRGRPRCTTRCGCAASSRGRRSPSPSRPAQAAARDASPGDSAPPWRRGRGARGGGCAGSTAPRRAAWAAPRRGAPRRRRGAAGDAASRSTRSSGRGTSRS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 32048241 | 32048366 | + | OsCMeo_02g0033720.02,OsCMeo_02g0033720.01 | OsCMeo_02g0033720.01,OsCMeo_02g0033720.02,OsCMeo_02g0033720.03 | All |
| SE | Chr02 | 32048410 | 32049466 | + | OsCMeo_02g0033720.03 | OsCMeo_02g0033720.01,OsCMeo_02g0033720.02,OsCMeo_02g0033720.03 | All |
| SE | Chr02 | 32050101 | 32051307 | + | OsCMeo_02g0033720.03,OsCMeo_02g0033720.01 | OsCMeo_02g0033720.01,OsCMeo_02g0033720.02,OsCMeo_02g0033720.03 | All |
| SE | Chr02 | 32052936 | 32054055 | + | OsCMeo_02g0033720.01 | OsCMeo_02g0033720.01,OsCMeo_02g0033720.02,OsCMeo_02g0033720.03 | All |
| A5 | Chr02 | 32049613 | 32049722 | + | OsCMeo_02g0033720.03 | OsCMeo_02g0033720.01,OsCMeo_02g0033720.02,OsCMeo_02g0033720.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.608001 | 3.359548 | 9.287015 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0749150 | RBH | 2.341347 | 3.819489 | 1.406248 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g51400 | RBH | 1.690388 | 2.894525 | 0.817079 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0749150 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033720 | RBH | 1.323047 | 5.172133 | 6.974598 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0033830 | RBH | 0.366023 | 1.291947 | 4.353529 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0008470 | RBH | 0.520273 | 5.276272 | 5.401687 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0033300 | RBH | 0.259499 | 0.394160 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0033380 | RBH | 8.605375 | 7.435625 | 15.505084 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0514200 | RBH | 7.781254 | 13.587532 | 16.857873 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033200 | RBH | 0.372224 | 0.782089 | 1.693508 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0543700 | RBH | 6.76246 | 8.0968905 | 12.922826 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0033460 | RBH | 0.399799 | 0.080080 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0033270 | RBH | 1.171539 | 13.258657 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033600 | RBH | 13.334669 | 3.042526 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0033480 | RBH | 1.086744 | 1.229902 | 1.927285 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0033080 | RBH | 0.215135 | 6.303536 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033760 | RBH | 0.619627 | 5.078568 | 1.583891 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0033470 | RBH | 1.827108 | 6.270965 | 5.794170 |
