Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0029290 | OGI:02079200 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:28661742-28667512 | ||||||||
| Gene Symbol | CDPK5, OsCDPK5, OsCPK5 | ||||||||||
| DNA seq | aaatctatcggagtcctgccttcccagcaggagcagcagagtcgcggcgccagagcgacgctggctgcagcctgcatgtatgtcccgcgacggcagcagcggccttcccctcgctttccgcaaacgtggacgcgaacccgtcgtgaagcctcctcctcctcatccaatccacctcccccctctctttcccaatccccactgctgcttccgtccgcttccgattccaagtttccaactccctccattgctcgcctcgccgcgccgcgcgctacctaaaccccgcggcgaggctttagggtagatgcgagaggaggccgcgtggacggcggcgcgcatcatcagcgcgtgatggggaacacgtgcggcgtcacgcttagatccaagtacttcgccagcttccgcggcgcgtcgcagcggcatgatgaggcggggtacgcgcccgtcgccaccagcgccgccgccgccgccgccgccgatgagccggccgggaagaaggccccgcgcggttctgcggcggcggcggacgcgccgcacgccgcgtccatgaagcgcggggcgcccgcgcccgcggagctgacggccaacgtgctcgggcacccgaccccgagcctgagcgagcactacgcgctcgggcgcaagctcgggcaggggcagttcggcaccacctacctctgcaccgacctcgccaccggggtggactacgcctgcaagtccatagccaagcggaagctcatcaccaaggaggacgtcgaggacgtccgccgcgagatccagatcatgcaccacctcgcgggccaccggaacgtcgtcgccatcaagggcgcctacgaggacccgcagtacgttcacattgtgatggagctctgcgccgggggcgagctgttcgaccgcatcatcgagcgcgggcaattcagcgagcgcaaagcggccgagctcacgcgaatcatcgttggtgtcatcgaggcgtgccactcgctcggggttatccatagggatctcaagcccgagaacttcttgctggcgaataaagacgacgatttgtcgctcaaggccatcgatttcggcttgtctgtgttcttcaagcctggtgagtcacccctgctgttagaaactcaattatttatttctgtgactgttgcgcttgctccatcactttctgagcaatcgttgatggtaatagtccaatagatggaatggtttggttggtggaattaatgatacatagttgctttagctcatctgactagagaatgtatggaaattaagatttgagaatagagaataggaatatagtttagtcgtttaaaatcatttcattcattcattgggactcaacatatactgatccaatctgataattagatgttaacatttacgcatcagatggtgaaggctgctcttggtctggggttctctcttttttgggtacaattgttgttcgtaaatgagattgctagcaaaatatgggtttttgcattcatttaaaaagtttatgaatactaaagaaaaatagttaaacttacagtttttcaaaaaagataaattaattatgggacaaatatgtgaagatcgatttctgaattgtttcctgctgctggtggatgaataataaaaagaaaagaagaagaaattgattgtttggtgctttgctgtacagactacagcaataggaacaatcaaaatcgaacctgtctttgtacacttatttgaatctaaatatatgttattcaccgatatactgatttgaccacttctaaaagggctaaaactaactgtttcattgcaactaatagaagctactttacatatagctaaaagtaccatctatcgcgaaatccacttcctatgaatctctcttctataaatctatttaccatttatgtgcatcttatgcagcatttactgtattaatttttcagtgtaattagttatcttataaagaaattccgtttgttgtttactattcttaggtcaagtttttactgatgttgttggaagcccatactacgtggccccagaagtgttgcgtaaatgctacggaccagaagctgatgtttggacagctggtgtgattctttacatactattaagtggtgtaccgccattttgggcaggtatatatttactcctttattatcataaattgacttggaaattcaaaccttgtgttttcactcgtctaagctgacctgtactatatttaatgcagagacgcagcaagggatatttgatgcagtgttaaaaggtgtaattgattttgattccgatccctggcctgtgatttctgatagtgcaaaggatcttataagaagaatgttgaatcctcgccccaaggagcgcctaacagctcatgaagttttatgttagttattttcaccattactctagttcttttcttcaataactcagtatgttttggtgtgtgtattgttctgaaatgtgccctctatggtgcaaatatttagttttgtaacagtatatggtaactacttatgcacagctgttggacaaagatgttaaagaattattttcatacctgaccaggtcatccgtggatttgtgaccatggagtcgctcctgatcgacctcttgatcctgctgtactttctcgcattaagcagttttcagcaatgaataagttaaagaagatggctttgcgagtgagtacattcttttccttttggcaattctaaagttactgtggtagctatcatagtacttcacctttcacaagcaatttgaagtcatcctccattgttgtttgctggctagagtgtccgttaccttgtcttgttccttttgattgttttttttttcagaattgcttcctgtctttattatctgaattttcttttgtgggctagtttttatactctattacatgaccagtacttatgggggcacatttgctaagttttatgctgactgacggtttgtcctgccaggtaattgctgaaagcctttcagaggaggagattgcaggattgaaggaaatgttcaaggcaatggacacagataatagtggtgcaattacatatgatgaactcaaagaaggcatgagaaaatatggctcaacactaaaggatactgagattcgtgatcttatggaggcggtaagttggtgaaatctattaaaattaacatttatgattgctagcttaaggatccttcctgcatgtttttagatattttatgatccagattgcttctttctgaacagaaagagcactgaaagtctgccacctggttccttgcactgttgcacatgtacacaaaagccaagttttatgatcagtgacccatgctttttcttcattgaattaaaacatcattgattgcagaaactgaatgccatggatgtgtctccttagtgtctagtatatggtttgcatcttaggcagaactgttgtctgtgtgaccgtgtgagtgaaattagacaaactatctctattaaactaatctactgtatttcaccgattatttgaagttgagtcatatttttgtcttctctgattgccatgtgatttcatttccaaaccacaagaaaacatttttttttaggctttcttcagctagaacttattttcaatttttgtgaatactcaaaaggtttacatatctgtactgtgcattaagaagaagtaaacaaggtttacaaagaaagctttcactcaactaactaggggcgaacaaaaacaggacaaacacagaaaggttatttttatttcagtgagcatatgcttatgtggcagtaaatgcttataacttcatctcggttttttatttttgtgtgcccctgttgttttaatttacagtctcccttatgtaacgggtgtatgttttatggtgtagagtttattattccttggaaaactgaactgtgggcttacatatttatttttgtttgaataactttaggcggatgtggacaacagtggaaccattgattatatagaattcattgctgctactctgcatctcaataaactagagcgagaggaacatctagtggcagccttttcttatttcgacaaagatggcagtggttatattacggtggatgagcttcagcaagcttgcaaagagcataacatgccagatgcttttctcgatgacgtcattaaagaagctgatcaggataatgtaagcatgttgccccattagtttgttatagctaacacatgcaggaaggatatacaaatatttattaatgagtaaagtgcacgggcggtccttaaacttgcaggggtgtgtcatctaggtccctaaactctcaaaatacatacaagtccaagaacttgtcatagtgtgtcatttaggtcccaaatcgccctagcccctataggatcttacgtggcactgatgtggcatgccacacggacaagacgtggcatcattttgactaacaaatgaaacccatttatctttttcttcttttcttatcttttcctcctcttttttttctttcttctcctttttttttcttttcccgagtagaagaaaggaaaaaaaagaagaatgagaagaaaacgaagaaaaaagaagggagaaagaagaaaaggacatatcacgtccatatggcatgccatatcagcgtcacataggattctataggggctatgtcgatttgggacctaaatgatacactttgacaagttctgggacctagatgtgcattttgagagtttggggacctagatgacacaaccttacaagtttaaggaccgcctatgcactttactctttattaataatctgtttaaggaactttaaaagatttcacttgtcaaagcttgtcatggaacaaaactgcattagtactgtttcacaaaaaaaaaacaatttaaccatacataaaaacaaaagcagcactaaatctaagaaaaattaacgagatatagccatacctcacatatcaactgaatattacaaccaattgacctcttccacaacattaaagttggggtagatagtggaaatatagaaaatacatatggtcttgattttcctaacagattggatatatgtggtgaaatggaggtagtaataatttcatgggaatcactagggatatatctgcaggacatgacatgtcaggttatgctttcctagtgatatactgtggtgtacgaaacttgaacattcattttgtagaacatgtgaattgctgaacccattgctgtttgtgttgtttcttcaatacatatcgtccaaatgttcgtggttgaatgtctattgatatggtttactagttactgcgcttagaagaaaatatcttttatgtagcagtgatctaattgcacttatttcactccttttcatcaggatggtcgcattgactacggggaattcgttgccatgatgacaaagggcaatatgggtgttgggaggagaacaatgagaaacagcttgaatataagcatgagatgagacgcacctggtgcactatgaagtctgaacgtccacagtgcagctttgaaacttcttcaatctccatgctctatacggacactgcctgcaatttttgtacgctgtcagttgtagccttgtaggtgtgggtatgtgtttcaggttcaggggattctaattgttcatctaattcaacagtcggtatgtgtttcaggttcagggaattctaattgttcatctaattcaactgctcctgttatttctacgaaatgcacggggtgggaaagtgcccatgccatgcgcaaactaggctacaatgttcatatacgttgccacagggcctaatttctgcagttcgtcac
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| CDS seq | atggggaacacgtgcggcgtcacgcttagatccaagtacttcgccagcttccgcggcgcgtcgcagcggcatgatgaggcggggtacgcgcccgtcgccaccagcgccgccgccgccgccgccgccgatgagccggccgggaagaaggccccgcgcggttctgcggcggcggcggacgcgccgcacgccgcgtccatgaagcgcggggcgcccgcgcccgcggagctgacggccaacgtgctcgggcacccgaccccgagcctgagcgagcactacgcgctcgggcgcaagctcgggcaggggcagttcggcaccacctacctctgcaccgacctcgccaccggggtggactacgcctgcaagtccatagccaagcggaagctcatcaccaaggaggacgtcgaggacgtccgccgcgagatccagatcatgcaccacctcgcgggccaccggaacgtcgtcgccatcaagggcgcctacgaggacccgcagtacgttcacattgtgatggagctctgcgccgggggcgagctgttcgaccgcatcatcgagcgcgggcaattcagcgagcgcaaagcggccgagctcacgcgaatcatcgttggtgtcatcgaggcgtgccactcgctcggggttatccatagggatctcaagcccgagaacttcttgctggcgaataaagacgacgatttgtcgctcaaggccatcgatttcggcttgtctgtgttcttcaagcctggtcaagtttttactgatgttgttggaagcccatactacgtggccccagaagtgttgcgtaaatgctacggaccagaagctgatgtttggacagctggtgtgattctttacatactattaagtggtgtaccgccattttgggcagagacgcagcaagggatatttgatgcagtgttaaaaggtgtaattgattttgattccgatccctggcctgtgatttctgatagtgcaaaggatcttataagaagaatgttgaatcctcgccccaaggagcgcctaacagctcatgaagttttatgtcatccgtggatttgtgaccatggagtcgctcctgatcgacctcttgatcctgctgtactttctcgcattaagcagttttcagcaatgaataagttaaagaagatggctttgcgagtaattgctgaaagcctttcagaggaggagattgcaggattgaaggaaatgttcaaggcaatggacacagataatagtggtgcaattacatatgatgaactcaaagaaggcatgagaaaatatggctcaacactaaaggatactgagattcgtgatcttatggaggcggcggatgtggacaacagtggaaccattgattatatagaattcattgctgctactctgcatctcaataaactagagcgagaggaacatctagtggcagccttttcttatttcgacaaagatggcagtggttatattacggtggatgagcttcagcaagcttgcaaagagcataacatgccagatgcttttctcgatgacgatggtcgcattgactacggggaattcgttgccatgatgacaaagggcaatatgggtgttgggaggagaacaatgagaaacagcttgaatataagcatgagatga
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| Protein seq | MGNTCGVTLRSKYFASFRGASQRHDEAGYAPVATSAAAAAAADEPAGKKAPRGSAAAADAPHAASMKRGAPAPAELTANVLGHPTPSLSEHYALGRKLGQGQFGTTYLCTDLATGVDYACKSIAKRKLITKEDVEDVRREIQIMHHLAGHRNVVAIKGAYEDPQYVHIVMELCAGGELFDRIIERGQFSERKAAELTRIIVGVIEACHSLGVIHRDLKPENFLLANKDDDLSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLRKCYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGVIDFDSDPWPVISDSAKDLIRRMLNPRPKERLTAHEVLCHPWICDHGVAPDRPLDPAVLSRIKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITYDELKEGMRKYGSTLKDTEIRDLMEAADVDNSGTIDYIEFIAATLHLNKLEREEHLVAAFSYFDKDGSGYITVDELQQACKEHNMPDAFLDDDGRIDYGEFVAMMTKGNMGVGRRTMRNSLNISMR |
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| Function | Calcium-dependent protein kinase 5 [UniProtKB/Swiss-Prot:Q0DYK7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0029290 | OsCMeo_02g0029290.01 | Chr02 | 28661742 | 28667512 | + | NAM | ||
| CDS seq | atggggaacacgtgcggcgtcacgcttagatccaagtacttcgccagcttccgcggcgcgtcgcagcggcatgatgaggcggggtacgcgcccgtcgccaccagcgccgccgccgccgccgccgccgatgagccggccgggaagaaggccccgcgcggttctgcggcggcggcggacgcgccgcacgccgcgtccatgaagcgcggggcgcccgcgcccgcggagctgacggccaacgtgctcgggcacccgaccccgagcctgagcgagcactacgcgctcgggcgcaagctcgggcaggggcagttcggcaccacctacctctgcaccgacctcgccaccggggtggactacgcctgcaagtccatagccaagcggaagctcatcaccaaggaggacgtcgaggacgtccgccgcgagatccagatcatgcaccacctcgcgggccaccggaacgtcgtcgccatcaagggcgcctacgaggacccgcagtacgttcacattgtgatggagctctgcgccgggggcgagctgttcgaccgcatcatcgagcgcgggcaattcagcgagcgcaaagcggccgagctcacgcgaatcatcgttggtgtcatcgaggcgtgccactcgctcggggttatccatagggatctcaagcccgagaacttcttgctggcgaataaagacgacgatttgtcgctcaaggccatcgatttcggcttgtctgtgttcttcaagcctggtcaagtttttactgatgttgttggaagcccatactacgtggccccagaagtgttgcgtaaatgctacggaccagaagctgatgtttggacagctggtgtgattctttacatactattaagtggtgtaccgccattttgggcagagacgcagcaagggatatttgatgcagtgttaaaaggtgtaattgattttgattccgatccctggcctgtgatttctgatagtgcaaaggatcttataagaagaatgttgaatcctcgccccaaggagcgcctaacagctcatgaagttttatgtcatccgtggatttgtgaccatggagtcgctcctgatcgacctcttgatcctgctgtactttctcgcattaagcagttttcagcaatgaataagttaaagaagatggctttgcgagtaattgctgaaagcctttcagaggaggagattgcaggattgaaggaaatgttcaaggcaatggacacagataatagtggtgcaattacatatgatgaactcaaagaaggcatgagaaaatatggctcaacactaaaggatactgagattcgtgatcttatggaggcggcggatgtggacaacagtggaaccattgattatatagaattcattgctgctactctgcatctcaataaactagagcgagaggaacatctagtggcagccttttcttatttcgacaaagatggcagtggttatattacggtggatgagcttcagcaagcttgcaaagagcataacatgccagatgcttttctcgatgacgatggtcgcattgactacggggaattcgttgccatgatgacaaagggcaatatgggtgttgggaggagaacaatgagaaacagcttgaatataagcatgagatga
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| Protein seq | MGNTCGVTLRSKYFASFRGASQRHDEAGYAPVATSAAAAAAADEPAGKKAPRGSAAAADAPHAASMKRGAPAPAELTANVLGHPTPSLSEHYALGRKLGQGQFGTTYLCTDLATGVDYACKSIAKRKLITKEDVEDVRREIQIMHHLAGHRNVVAIKGAYEDPQYVHIVMELCAGGELFDRIIERGQFSERKAAELTRIIVGVIEACHSLGVIHRDLKPENFLLANKDDDLSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLRKCYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGVIDFDSDPWPVISDSAKDLIRRMLNPRPKERLTAHEVLCHPWICDHGVAPDRPLDPAVLSRIKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITYDELKEGMRKYGSTLKDTEIRDLMEAADVDNSGTIDYIEFIAATLHLNKLEREEHLVAAFSYFDKDGSGYITVDELQQACKEHNMPDAFLDDDGRIDYGEFVAMMTKGNMGVGRRTMRNSLNISMR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.546471 | 7.835739 | 2.860900 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0685900 | RBH | 0.620850 | 0.749628 | 2.386290 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g46090 | RBH | 0.423340 | 0.467773 | 0.584708 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0685900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0029360 | RBH | 0.368674 | 4.122506 | 2.948042 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0029420 | RBH | 0.0 | 1.028854 | 2.246074 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0024850 | RBH | 3.582193 | 38.918640 | 20.835135 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0028880 | RBH | 0.0 | 0.278702 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0029070 | RBH | 0.000000 | 5.905252 | 7.665343 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0456600 | RBH | 5.486579 | 32.1936415 | 10.1486055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0028880 | RBH | 0.124099 | 0.514315 | 0.532726 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0484300 | RBH | 5.9740795 | 32.3936115 | 11.224231 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0029190 | RBH | 0.035832 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0028940 | RBH | 0.077982 | 6.158597 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0029230 | RBH | 0.000000 | 10.145657 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0029090 | RBH | 0.157610 | 0.540735 | 0.965646 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0028770 | RBH | 0.051067 | 2.046318 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G029330 | RBH | 0.034660 | 3.174417 | 0.912582 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0029100 | RBH | 0.411114 | 0.000000 | 1.697479 |
