Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0028110 | OGI:02076510 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:27623243-27636313 | ||||||||
| Gene Symbol | YDA2, OsYDA2 | ||||||||||
| DNA seq | agcaacataatcatatagtcacgttgatttgattaacgatcagaatctctgtataatttccagagtaatagatacagtgaatggattacctgagtacagcaacaacgctttcactatgcaggctgcagctgactagttgcaaaagctcgcagcaaggggaagtactgagaaaaagaatgggtattgaatggttcaattgcctctacctttgcaaaatgtggacttctagttgagtttcctcctgtacaatggcctcgaaacccatagattgtccaaaggaaaacgaatgtagataccagagtatacaggtgaagaactactgttttgggtccttggctatctagaccctctgtaatatacaattgcatcaacgacgtgtaactggttaacacataacaggcatggtaatatggaagtcaacgcctgttcctggtgggggcatagctcacctgtccattcagaatgcactgtcagcaatagactatgactaagatagatatcttcactgtcccaaaaacgaaggaaaaaaagaggaagagttgaagattgaatggcgatatagagctctccaaagccaaggatatgtagttggcggtccccaaatgaccccagtaaataagcggattcgattcacatatctaagtccatgtttcggaattttactacaacaaaggaatcaatgtttggcaagtaaatatagtaccacacaataatggtagcaagtcaaatttggcacctcaaagattctgttatttaaagataccaggcaaaaaactactgcacttgatgatagtacgacactcaatcactcattaagcccatgtactatatatatccagtgaaggtgtaaaagctgttaatgatgtagataacatagagcaattctttcaagtcttagagttagaataaaaggctattctttttctaaaaatgtataaatagaaatgcgagaatttgcagaaaactatgagaagggatgtacctttgttgagacggtcagcttctgaaataattaatgaaattattcgtgtactatgatacagtgccaggcttgcagtaaatagatgggcaaactggctcagcagctctcatcaagctccaactcaatgcctatccagcacacctttgggtgaaatcaatgaccatggttgcacccaaggtgtggtggaccagatctcaaatccagtggaggcttaagttttacccgatcctcaaagcccttctgtgaagcatgctcagaaggcagtggcttatcatgcaaattccacacgctcacatgtcccatccttccaaattgagggctcagaatgtcagcttcagggactgccctctcctgaaaacctagcgagggttgtttcactctaacaaaacgaccaaggaccggatctggaggctggtttggcaagggctcatcaagacatctcgatgtaattgtgaaaccctcattattgtaagctaggtgtcttgcatggttaaaaggaatagctccattaccaccagtcagaggagtggaagcacctgaagtagttcttgggctcgaaatcggagagggtgacattataccattttgatgttgtggagatcttgacctcagatgagggctcccacatggagaaacagggcaagatatatagcttcgtacatgaatatcactgcaagcaccgatgattagagtacatacatttccatgcagatatacattcactgaactgttttttttttaaaaaaaacgaggaactgtatttcttataggagtacaggactgagttatcgaaaataaatgacagcagggtacagaacaagggtaaaatgtgaaaaatattacaatagcattaaacactgcttgaattttacagtgggagcatgttgcagctcagatgaattaagcagggacatcaacaaaacataaaagcacatttgggcaattattcatacttgcatgttgaaaaaaggacattagtaagatttctagtagggttcacttagtgtcctcatatataaaaaattcatacaaaggtcatttattttgtattcatttgaatgtcattatttaggggtaactgccaaaataaaaggaggaggagatagttcagtaatgtgcagctaaaatttcctactttgaaatgttagctaatttacttttcgtcataccaaagcataaggattatgatatgagaggtttggttgcggttctaatttaattttttcagcagagatttataagttagctactgctcctctagaatatttagtacacacactccaaagcaatattcttatgaattagcaggtagattcaaatattgaatgattcacctgtgcacagaagaaaatttagcagctcttctctggtaaatggattgcccttccaaacccaaagaagacatatttctggcatgcccgaccacctgaaatgtcacaagagacaaagcgtaagaaaaatggaacaatcaattgtccatctgataaccaagaccttaatactctaagtaggccccagtaacatttatctgtcctagttagctacaacagccagaaagaagcaaatgaaaggaaacaaggtaaaaaataaagtaaatgatttgtagaattaatgcatacagctgctaactgggcaaacatgcatgacagatgtttagctaaaagacaacatgttccaggaaagcagttgataccttcagatctggtttgcaggatgtagtagacaactgtagcaatggatccgacagtgatttttcaagtggagatgcatttcgtataaatgaatgctgcaaaagatccactgctgttggacggctggatggattgcgctgcaggcactgtcttataaagtctctgccctcttctgagaggtgatctggtattggtggaagctccttactgtttcctatcttaaacactgcagcaatctaaaaaacaaagcattgtgtcaacatctggctcataacagatcaatgatttattcctactgccaatccatacaaaatatttaaaaggaacaaaaaagagaggggggggcacttttagaacgaatgttactgcggaacaagagacatgtcaagaatataggaaagaggtgtcgcagattgttaagtagtatttctcataagggcaccttcaacgtgaagcttagatggatgctttggggaaaaaaataggatagcaaaataacatgatgtaaaatccaaaaatagaatggaattaacactaaaaactgctagatctaggtcaatatagtgataatcagtatgcattataataaataaaagattccagttttgacgccaaagggatccattgccccccttagcgaatacatcatgatgcaatgtctcaaaaagtccaagataaatagaaggtgaagaacatataaagaagtctaacatgcaaaacctcaaccaaattttcaatatacaaaaaatatataagcattcacatggtaccggtcatcatgtggttcctgtaccacttgtctgttttatattcaacataaaaaaatgaatacaaaattaaatcattgcatctttaaacaacctttttgttttggaatttttcaaacatagtgtcatgttggattcgtcagatttcatcaaaggggatgctgggcctcctggccaccacaaacttttgctaactaaaaagagcattgggaaaataagacaaaacaatgagccatgctgaacttgtttttttaattaaaataagtactgaagcaaaaccacaacaatgatacagtatccaccattcatcttctatagtactcccttcagccaaaactatatgacatttgacttttttatggtcttcaaaattcactgttgaatcaaatattgtagcaatgtgcagttattcaaaactcgtagcaaagtgccattattcaaaattcaacgttgaatcaaatatggttttacattagaataagtataaaatcttgtaagtttatgatattatgataatacttttcaagtcgaatcgacacataccatttttaagttgaactaagcccattagaagttatgatggtcaaggtttcaaaagtatgaccgtatattgtcctaaacgttcccctaaaaagatagtccgaaacatcaaatatttatgaccaaagggagtaccttctcatgaaaagaaaatgtgtgttgcacaaaaacataaaatacagcttaagagcctagtataagtactaaccccttcatattggctccatggtggttttgaggtagccatctctaaaaccgtgcatcctaagctccatatgtcaacagcaagattacatccattagaattttttataacctgcatagttattacatgtgtgagagaagcaaggttgatttttataacagcggagagaagataggcataaattcatcaaataactagagaagtgtagaagaatgtaggattttcattacctcaggagccatccagtacgggctacccttaaatgaaaaggcacactgctgcccattgatctgaaaaatggattggcagaaaagaagttcatatgcgcggataaatatccaaagaagaaacatctatagacaaaaggaccttcccataaacatataacttgctagaaacaactaatcacttatccaaatggcccataagagtcggcccatgaaggtatacaagcttatattactaataaaatggcactacatctatggtaaacaaactactgcctagtaactagcatagaaacatgcataaccatttggtccaagtaagccagcaaatgtgctgacagatacggtaaggaccaaaacaaaatggttatctcttattgaatggattgatctagcacaagtggtagtcctcaagtgcaagagaacacgagggaaagggtaaagcacaatacaccatttcttcctatgaagatgatacaaggaattacatctaataatgcttttgctttaaattttagttattcctgacaaatgagaaagatttttttttttacaatttgaaacagagaatttacatgttttgccattccgaagtcagcaagctttacacgaccattaggatctaccagtatgtttgcacctttaatgtccctgcaaattatggaacatgacaaataataaaataatctacaacttggtagcttacatctaaggaactgaagtgctgaactaacgacaaaaggaaatggaatgttacctgtgaaccgtattttttgcatgcagataagccaagcctaaaagtatttgcttggtataactgcggatagcaggttcaccaaattgcccatactcctggagtagtttatggatggatccaccagaaacatactccaggtatatataaagtttatcatcaacctgttttgaataaatggatagtgtatagttatttttaaagtaaacagaggagtcaggagtgcaagcaaaagtgaagttcgtaaaattctgcagaatgtggcatgaacttttttgcttcgtttccttacagagaagtgttcagagaaatattatagttcagtggcatatgtcatcatcagagagtacagtgcagtgcaagaaataataatgcgggtacgcacattggtcatgcagtcaaaccttgaaactaacccacaaatctgtactccttctgaaggaagacagtgtagcggtggtgacagtgaatctgccacccaccaactatgaactacattttgtaccaataagacatgcatttatttttatctgttgcaaagccacctgcatttagctagtaccccccccccccaactgtttcaaaatataaggcttattttgagggcacaaagattaagaattgttagaataggtgtcgaatatactagtcctatttggttacggttggacttggagttgtaataggtgttaggggtagagttagagtcggactctgtaacctgtcatctctcttaaatagagagggggcaccacaatgtaatcatggcgactacaatgtagcgtagacacgcagggagatgatggcggcatggccatggactcgtagcggctaggagctatattggttggggaggagcgcccataatcagagccccggggatgtaggcttcggctgaacctcgttaacaaatatcgtgtgttcctgtgtcgtcatctggcatgtcttgggtgattaatgattgaagcgatcgagaaggttagtcgtcgttccgctatatcggctaacttttataacaagtggtatcagagcagaaggtttcaacattggatcaagaagacatgtggaggaggaaacacgaggtgggggtcgcgcatcgacaggagatcgtcagccgtggcgatgagatcgatggcgacaacgaggacgttgcggaggtgacaacctcgctcgcgatcagaccggcgatggcggaacttgaccggaagacggggccgagcgtggccgaaggcgaccggagagatcggaggggtagcgccatggacggcgcgcccgacgcacgcggcgaacgcggcagggaggccagtgacggaagggcgaagccggcgagcgtggcacggcgcggcggacgtgcaaggccgatgacgacgggatcgtggacggaaaacatgagggctgcgactgcggtgcgtgcagaggcacgaacgacacgtatgtgtacgtgtcacatgcatacagtacgcgtacagatggtggccaagagcaagagatatgcacgagttgttgcaagcatgcaggatattaattccatgcatggattaattagttgcatcttaatgcatgagtgcatacgatttcaattggatttgtgtgggacacgtacaagctgcgtgcatgcatgggcatgcagaacagacgacgtggattgctgccgtgagagaagatgtgaggagaagtcaaacatcaaaggcctaattccgtgtgggagctggtcaggagaccgtttctgataaggcacgaaattatgtcatcgacgcggactcggcttgacgtgtccatccggactcgaagtcgatctggactcggtatcccggtggctgatgctatttaaggagcggttaggacgtgaacctatggcagaaaaggcgacgggcaattgatcgagacactcgtaagcttaccacggaaggcacaaatctgggctcaaggcaagatcgtacagcaggcgtacaggtgtgtgcaaaccggacagaaccaaaagcaggacggagaaaaaccgtgaagcagattagttggatcggtgcggcggcggacaggtggtttgctgttgaatgtctgagatcggatcacaagacgggattgtgaagacgaatacggacggttctgagaagggcgagtattctggtggcgacagaccagtcaggtcgcgggttggcaagatggcgccgacaggtatgaaatttgatttggtgaagtttgacggctctggaaattttggcttgtggcaaactagggtcaaagatttgttagctcaacaaggtgcttcaaaggctttgaagggtgtcaaaccggccaagatggaggatgacgattgggaggagatgcagttgcaggtggctgcgacaataaggctatgtctttcagatcaggtcatgtaccatgtgatggaggagacctcaccaaagataatttgggaaaagttggaagctcagtttatgtccaagactctgacaataaactgtatctgaagcagaagttgtatgggctaaagatgcaggaaggggtggatctgacagcacatgtgaacgttttcaatcaactagtcacagatcttgtgaagatggatgtggaagttgacgatgaagacaaggccatagttcttttgtgttcgttacctgaatcgtatgagcatgtggtgactactttgacgtacggcaaggagaccatcaaaactaaagatcacttctgcgttgttggctcgtgatcagatgagaaagaacaaagagggtgaaacatctcaagcggagggtttgctagtcaaagaagatcatgctgggcataaggtaaagaagaacaaaaagaagaaggtggtgcagtgcttcagatgtgatgagtgggggcatataagcaagaagtgcccaatactgaagggaaaagctaaggctaatgcagcgacttcttcaaatgactcagatagcgatggttgtgatcttctcaaaatgtcaagtgcacagtctaaggatgcagaagcgtggatattagattcagctagctcgtttcacgtgacgccaaggaaggagtggttcttttcatacaagtctagtgagtttggttttgtctacttaggcgatgacacaagttatccagccgtgggagtaggtgaagtcaaaatcaagctagaagatggaggtgaacatgttcttcagggtgtcaggcatgtaccagggctaaagaggaatctgatttcgcttggaaccttgcatgaagaagggttaatatttcgcggtaatcggaataagaagaccatggagatcatgaagggcaagacgactgtgatgactggagagaaggtggagtcgcaactttacaagctgcgagggtgcactattgcaggtggagtctaggaggaagcggttgctgggatagcaattgcttttggtggcggcgggtctggcgcagactcgtcgggcggcttgcggtgaagctgcgaagaagacaacccaagtctagaggataggtggatcggcatggtgattctactacttctaggtggcttatattcgccaaggtggagtttgttagaataggtgtcgaatatactagtcctatttggttacagttggacttggagttgtaataggtgttaggggtagagttagagtcggactctgtaacctgtcatctctcttaaatagagaggggggcacgacaatgtaatcatggcgactacaatgtagcgtagacacgcagggagatgatggcggcttggccatggactcgtagcggctaggagctatattggttggggaggagcacccataatcagagccccggggatgtaggcttcggctgaacctcgttaacaaatatcgtgtgttcctgagtcgtcatctgacatgtcttgggtgatcaatgattgaagcgatcgagaaggttagtcgtcgttactctatatcagctaacttttataacaataattgtacagaaccaagagaaagagcagttaaattgaccatcctaccatacttaaataccttagaaatagctaaatagatggttagtgagatgcttcttataaatgcaggagagacactagtaataattatggacatataaggaatatagttaataaatttgcatggagcccatatatcttgcaaaagtttgaaaaactatacgcctaacagaaacaaacgatggagtgtatgcaaaaaaaaaaaagatctgatatgtgaaaatggtactagtagatttgttatggaaaataccttcacgtagttagattttaattttttttttataaatgtattgttagaaaaggatttttttttatgaatgtgttgttagaaaaggaatgatcacacatgttcaacaagtaaaaaaagaacaggagtggtattaacagaagataacaactggtggcataaatttataccatttcagatccatagtatcgtacaatatttggatgttgcagacgattcagaagtaatatttcctggtaaataaagaataatataagagcagagaagatagcgtaaagaaaaggacagtaaacgtggagaaaaatgtcatacctgacacaactgctttgcactttcttttgatttaggatcgtctgagaaaagggtgacctccttcattgcacacatttcacctttatcactgatacaaatgacagagaattatattatatcaaatttgaagagaaacaaaggatgatcagtcctaataaaatagtcagtggcacactactcaaaggatatatagagtgcttgttacaaacaacattgtgacaagaccacttcaataattacactctcaaagaataatgatgtcttaggctttgaaggtgaaatatttctgaatgagactctgtttaaaacatgccagtttactaatcactaaaccatgatatttattacgattcaggatgtagtatgagaaataagtatatgggagagattacaagagctgaatgagttagtaccattgtaggatttattaatgatgaaaaccatattgtgctttgcatcgaaattaaaaatgaacatcaaccaattccgagcatcgaaagggcatacctgttaaagccaatgtatacatggccaaatgtcccacggccgacaagctttcccttcttccaccgtgatccaggactagttggattttctactctaccaggactatgtgagataggactagttggggtggaattgtttggcaaaaaggtggaattgttacatatgcttagtggtggaaggggcaatctgtgggtttgcttcctcttcccttcatcaagtcgccttgttggagattcaggtgccatcccaccagcccttggatgcaatggagagacacttccactatgtacccttgaacttggaccagggcttgtcattcttgggctgggaattggtgaacactctggactacctcggctaggttgccaaaagagctgggctagcatatcacctcccactgaattatgcccagatgtttgccctgaaccaggactggagcactgagcagacccaacaaaagttacatctgtatgaggcttaactgcccaaaatgctgaacttggaatctgatcagggcataatattcttgggcttcgagaagggcttgacatcacactattgggagcactgtccagaacaacctttcgtgaattttgtaaatttgactggtaactgtcagcaacaacagtacctctgggacttgtagatagaatttgattactcaagaaagcattggttggcatcgtcacttccttagtgccctttctggtgatggcactagaacactccttatgcacaacacttcacaaacagagcaatcaatatccataagaatattttttaaaaaaagtacacaaacaaaaatgtgtttggataaatcatggattaagaaggataccttgaattaccggttgtagcaactttagccacattgtcggtgtcatttgccacaggtccctgaagtcgcaaatctccaggatcatcgctatctatagaaccatggctggagatagaagcagttgataattctgcaacaggttcggtagtttcaggtctttctttaacccaatttgtggtagggagcggtagttgttgtcctttgccacgcttttccaaaacgacctttgattcggtaatatcagaagcagtacgtgccaccatagcacgggatctaggaaggggaagtggttgtgcatgtgctctggctgcagcaaagctttgacaacgagaaacctcttttgaaggggatgcagagcgtgattgggcagtagaccagcaacctttctcagcagttggatctttactatgtctacgattcccccgtgattttgttctccccttttgctcatttggacttaataaccgatgaaatgtgtcaatgaggttttctttggcagtcttctttacttcttttgatgaagacttcccccaccatggtggcatattgaatatgaaacaagttggacaggatttcactgagctaatcacacattgaaattttgaaatcacgcaggtatccttagtttctgtagtgacaaaaaaaagtcctcaactcactggaatgctgtattatggagattcccagttagtgcttgctcatgctactttgatttctgtttaatgccttcaccacaaaggctgaaagttaacaaataacaataatgaggaccaagtcactaacagcgtgcatcattacagttccacacaactgcaaaagagttgagtttaatggagaagtacatgaccattgagagtataaaggcaaactgtgtgctgtttgttaaatttaattaaatttaataatacctggaagttggaggtagaagtagcaattactagaacgcttacctttggggttcatcttaaaaccacaatgaacaaaatcacatgtcaagctttcaagcttgctacatcactatcacctactgtgagcaaataactacagtgccacccattgctctaaaatgaaatgccaaggagataaagtacttattctgtcactaattgccccgtgcatcatttaagtcagagataactcctataccactgaaagtttcacctatctctgttttgccgattgccactaaataggctgtctctgccatcacaaaacatttgtcaacctttcatgccatttctgtccaagtgttatcagcctcctgtcgagctagcagcaatatggcataattgcgctcttctacctcctccttaatcccaccagtgcctccaacctccggcaaattcccttcttaacaagcagagtggcatgtaccgatgtgatggctacactctccaagtcggtgatcctactatactcggagccgaaccagttctagctaactgatcccggtaccaaactgtcacagccccttggctccatacctacatttctccgcgaaaccaacaaccaaagcacagttctacactccagggggcggatctaacgtgggatatcggggttgagctgaacccccacaaatttgttaggacacaaaactgttattagtaccgcaccacgaacgcaacaaacaaatcaaatcgggacgaggtgggacggctaggtgacagggaaacaaatcaatcaagtccgaatcgactcccaatcttacccacaccagcacatggaagaggaagagagaggagggctacgaaactagaaggaataccttcaattcgatacttcgattcgaaccgagatgctcgccggccggccgcacaggggagaatactagtgcggtagggggtcggggaaggggagcagcagcccgtccgcactgcgcctccggccctgctcgccggccgcgcgcgcgacggaggcgagtcggtgtcgcggaggaggagaacgctggccgagcctccgcccgtgcgtccgccggaaacggtttttttttttcagacgaacagataagatgagcagaggagaggaacggagagagacggt
More
|
||||||||||
| CDS seq | atgccaccatggtgggggaagtcttcatcaaaagaagtaaagaagactgccaaagaaaacctcattgacacatttcatcggttattaagtccaaatgagcaaaaggggagaacaaaatcacgggggaatcgtagacatagtaaagatccaactgctgagaaaggttgctggtctactgcccaatcacgctctgcatccccttcaaaagaggtttctcgttgtcaaagctttgctgcagccagagcacatgcacaaccacttccccttcctagatcccgtgctatggtggcacgtactgcttctgatattaccgaatcaaaggtcgttttggaaaagcgtggcaaaggacaacaactaccgctccctaccacaaattgggttaaagaaagacctgaaactaccgaacctgttgcagaattatcaactgcttctatctccagccatggttctatagatagcgatgatcctggagatttgcgacttcagggacctgtggcaaatgacaccgacaatgtggctaaagttgctacaaccggtaattcaagtgttgtgcataaggagtgttctagtgccatcaccagaaagggcactaaggaagtgacgatgccaaccaatgctttcttgagtaatcaaattctatctacaagtcccagaggtactgttgttgctgacagttaccagtcaaatttacaaaattcacgaaaggttgttctggacagtgctcccaatagtgtgatgtcaagcccttctcgaagcccaagaatattatgccctgatcagattccaagttcagcattttgggcagttaagcctcatacagatgtaacttttgttgggtctgctcagtgctccagtcctggttcagggcaaacatctgggcataattcagtgggaggtgatatgctagcccagctcttttggcaacctagccgaggtagtccagagtgttcaccaattcccagcccaagaatgacaagccctggtccaagttcaagggtacatagtggaagtgtctctccattgcatccaagggctggtgggatggcacctgaatctccaacaaggcgacttgatgaagggaagaggaagcaaacccacagattgccccttccaccactaagcatatgtaacaattccacctttttgccaaacaattccaccccaactagtcctatctcacatagtcctggtagagtagaaaatccaactagtcctggatcacggtggaagaagggaaagcttgtcggccgtgggacatttggccatgtatacattggctttaacagtgataaaggtgaaatgtgtgcaatgaaggaggtcacccttttctcagacgatcctaaatcaaaagaaagtgcaaagcagttgtgtcaggaaatattacttctgaatcgtctgcaacatccaaatattgtacgatactatggatctgaaatggttgatgataaactttatatatacctggagtatgtttctggtggatccatccataaactactccaggagtatgggcaatttggtgaacctgctatccgcagttataccaagcaaatacttttaggcttggcttatctgcatgcaaaaaatacggttcacagggacattaaaggtgcaaacatactggtagatcctaatggtcgtgtaaagcttgctgacttcggaatggcaaaacatatcaatgggcagcagtgtgccttttcatttaagggtagcccgtactggatggctcctgaggttataaaaaattctaatggatgtaatcttgctgttgacatatggagcttaggatgcacggttttagagatggctacctcaaaaccaccatggagccaatatgaagggattgctgcagtgtttaagataggaaacagtaaggagcttccaccaataccagatcacctctcagaagagggcagagactttataagacagtgcctgcagcgcaatccatccagccgtccaacagcagtggatcttttgcagcattcatttatacgaaatgcatctccacttgaaaaatcactgtcggatccattgctacagttgtctactacatcctgcaaaccagatctgaaggtggtcgggcatgccagaaatatgtcttctttgggtttggaagggcaatccatttaccagagaagagctgctaaattttcttctgtgcacagtgatattcatgtacgaagctatatatcttgccctgtttctccatgtgggagccctcatctgaggtcaagatctccacaacatcaaaatggtataatgtcaccctctccgatttcgagcccaagaactacttcaggtgcttccactcctctgactggtggtaatggagctattccttttaaccatgcaagacacctagcttacaataatgagggtttcacaattacatcgagatgtcttgatgagcccttgccaaaccagcctccagatccggtccttggtcgttttgttagagtgaaacaaccctcgctaggttttcaggagagggcagtccctgaagctgacattctgagccctcaatttggaaggatgggacatgtgagcgtgtggaatttgcatgataagccactgccttctgagcatgcttcacagaagggctttgaggatcgggtaaaacttaagcctccactggatttgagatctggtccaccacaccttgggtgcaaccatggtcattga
More
|
||||||||||
| Protein seq | MPPWWGKSSSKEVKKTAKENLIDTFHRLLSPNEQKGRTKSRGNRRHSKDPTAEKGCWSTAQSRSASPSKEVSRCQSFAAARAHAQPLPLPRSRAMVARTASDITESKVVLEKRGKGQQLPLPTTNWVKERPETTEPVAELSTASISSHGSIDSDDPGDLRLQGPVANDTDNVAKVATTGNSSVVHKECSSAITRKGTKEVTMPTNAFLSNQILSTSPRGTVVADSYQSNLQNSRKVVLDSAPNSVMSSPSRSPRILCPDQIPSSAFWAVKPHTDVTFVGSAQCSSPGSGQTSGHNSVGGDMLAQLFWQPSRGSPECSPIPSPRMTSPGPSSRVHSGSVSPLHPRAGGMAPESPTRRLDEGKRKQTHRLPLPPLSICNNSTFLPNNSTPTSPISHSPGRVENPTSPGSRWKKGKLVGRGTFGHVYIGFNSDKGEMCAMKEVTLFSDDPKSKESAKQLCQEILLLNRLQHPNIVRYYGSEMVDDKLYIYLEYVSGGSIHKLLQEYGQFGEPAIRSYTKQILLGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHINGQQCAFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATSKPPWSQYEGIAAVFKIGNSKELPPIPDHLSEEGRDFIRQCLQRNPSSRPTAVDLLQHSFIRNASPLEKSLSDPLLQLSTTSCKPDLKVVGHARNMSSLGLEGQSIYQRRAAKFSSVHSDIHVRSYISCPVSPCGSPHLRSRSPQHQNGIMSPSPISSPRTTSGASTPLTGGNGAIPFNHARHLAYNNEGFTITSRCLDEPLPNQPPDPVLGRFVRVKQPSLGFQERAVPEADILSPQFGRMGHVSVWNLHDKPLPSEHASQKGFEDRVKLKPPLDLRSGPPHLGCNHGH |
||||||||||
| Function | Mitogen-activated protein kinase kinase kinase YODA [UniProtKB/Swiss-Prot:Q9CAD5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0028110 | OsCMeo_02g0028110.02 | Chr02 | 27623265 | 27635110 | - | NAM | ||
| CDS seq | atgccaccatggtgggggaagtcttcatcaaaagaagtaaagaagactgccaaagaaaacctcattgacacatttcatcggttattaagtccaaatgagcaaaaggggagaacaaaatcacgggggaatcgtagacatagtaaagatccaactgctgagaaaggttgctggtctactgcccaatcacgctctgcatccccttcaaaagaggtttctcgttgtcaaagctttgctgcagccagagcacatgcacaaccacttccccttcctagatcccgtgctatggtggcacgtactgcttctgatattaccgaatcaaaggtcgttttggaaaagcgtggcaaaggacaacaactaccgctccctaccacaaattgggttaaagaaagacctgaaactaccgaacctgttgcagaattatcaactgcttctatctccagccatggttctatagatagcgatgatcctggagatttgcgacttcagggacctgtggcaaatgacaccgacaatgtggctaaagttgctacaaccggtaattcaagtgttgtgcataaggagtgttctagtgccatcaccagaaagggcactaaggaagtgacgatgccaaccaatgctttcttgagtaatcaaattctatctacaagtcccagaggtactgttgttgctgacagttaccagtcaaatttacaaaattcacgaaaggttgttctggacagtgctcccaatagtgtgatgtcaagcccttctcgaagcccaagaatattatgccctgatcagattccaagttcagcattttgggcagttaagcctcatacagatgtaacttttgttgggtctgctcagtgctccagtcctggttcagggcaaacatctgggcataattcagtgggaggtgatatgctagcccagctcttttggcaacctagccgaggtagtccagagtgttcaccaattcccagcccaagaatgacaagccctggtccaagttcaagggtacatagtggaagtgtctctccattgcatccaagggctggtgggatggcacctgaatctccaacaaggcgacttgatgaagggaagaggaagcaaacccacagattgccccttccaccactaagcatatgtaacaattccacctttttgccaaacaattccaccccaactagtcctatctcacatagtcctggtagagtagaaaatccaactagtcctggatcacggtggaagaagggaaagcttgtcggccgtgggacatttggccatgtatacattggctttaacagtgataaaggtgaaatgtgtgcaatgaaggaggtcacccttttctcagacgatcctaaatcaaaagaaagtgcaaagcagttgtgtcaggaaatattacttctgaatcgtctgcaacatccaaatattgtacgatactatggatctgaaatggttgatgataaactttatatatacctggagtatgtttctggtggatccatccataaactactccaggagtatgggcaatttggtgaacctgctatccgcagttataccaagcaaatacttttaggcttggcttatctgcatgcaaaaaatacggttcacagggacattaaaggtgcaaacatactggtagatcctaatggtcgtgtaaagcttgctgacttcggaatggcaaaacatatcaatgggcagcagtgtgccttttcatttaagggtagcccgtactggatggctcctgaggttataaaaaattctaatggatgtaatcttgctgttgacatatggagcttaggatgcacggttttagagatggctacctcaaaaccaccatggagccaatatgaagggattgctgcagtgtttaagataggaaacagtaaggagcttccaccaataccagatcacctctcagaagagggcagagactttataagacagtgcctgcagcgcaatccatccagccgtccaacagcagtggatcttttgcagcattcatttatacgaaatgcatctccacttgaaaaatcactgtcggatccattgctacagttgtctactacatcctgcaaaccagatctgaaggtggtcgggcatgccagaaatatgtcttctttgggtttggaagggcaatccatttaccagagaagagctgctaaattttcttctgtgcacagtgatattcatgtacgaagctatatatcttgccctgtttctccatgtgggagccctcatctgaggtcaagatctccacaacatcaaaatggtataatgtcaccctctccgatttcgagcccaagaactacttcaggtgcttccactcctctgactggtggtaatggagctattccttttaaccatgcaagacacctagcttacaataatgagggtttcacaattacatcgagatgtcttgatgagcccttgccaaaccagcctccagatccggtccttggtcgttttgttagagtgaaacaaccctcgctaggttttcaggagagggcagtccctgaagctgacattctgagccctcaatttggaaggatgggacatgtgagcgtgtggaatttgcatgataagccactgccttctgagcatgcttcacagaagggctttgaggatcgggtaaaacttaagcctccactggatttgagatctggtccaccacaccttgggtgcaaccatggtcattga
More
|
|||||||
| Protein seq | MPPWWGKSSSKEVKKTAKENLIDTFHRLLSPNEQKGRTKSRGNRRHSKDPTAEKGCWSTAQSRSASPSKEVSRCQSFAAARAHAQPLPLPRSRAMVARTASDITESKVVLEKRGKGQQLPLPTTNWVKERPETTEPVAELSTASISSHGSIDSDDPGDLRLQGPVANDTDNVAKVATTGNSSVVHKECSSAITRKGTKEVTMPTNAFLSNQILSTSPRGTVVADSYQSNLQNSRKVVLDSAPNSVMSSPSRSPRILCPDQIPSSAFWAVKPHTDVTFVGSAQCSSPGSGQTSGHNSVGGDMLAQLFWQPSRGSPECSPIPSPRMTSPGPSSRVHSGSVSPLHPRAGGMAPESPTRRLDEGKRKQTHRLPLPPLSICNNSTFLPNNSTPTSPISHSPGRVENPTSPGSRWKKGKLVGRGTFGHVYIGFNSDKGEMCAMKEVTLFSDDPKSKESAKQLCQEILLLNRLQHPNIVRYYGSEMVDDKLYIYLEYVSGGSIHKLLQEYGQFGEPAIRSYTKQILLGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHINGQQCAFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATSKPPWSQYEGIAAVFKIGNSKELPPIPDHLSEEGRDFIRQCLQRNPSSRPTAVDLLQHSFIRNASPLEKSLSDPLLQLSTTSCKPDLKVVGHARNMSSLGLEGQSIYQRRAAKFSSVHSDIHVRSYISCPVSPCGSPHLRSRSPQHQNGIMSPSPISSPRTTSGASTPLTGGNGAIPFNHARHLAYNNEGFTITSRCLDEPLPNQPPDPVLGRFVRVKQPSLGFQERAVPEADILSPQFGRMGHVSVWNLHDKPLPSEHASQKGFEDRVKLKPPLDLRSGPPHLGCNHGH
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0028110 | OsCMeo_02g0028110.01 | Chr02 | 27623243 | 27636313 | - | NAM | ||
| CDS seq | atgccaccatggtgggggaagtcttcatcaaaagaagtaaagaagactgccaaagaaaacctcattgacacatttcatcggttattaagtccaaatgagcaaaaggggagaacaaaatcacgggggaatcgtagacatagtaaagatccaactgctgagaaaggttgctggtctactgcccaatcacgctctgcatccccttcaaaagaggtttctcgttgtcaaagctttgctgcagccagagcacatgcacaaccacttccccttcctagatcccgtgctatggtggcacgtactgcttctgatattaccgaatcaaaggtcgttttggaaaagcgtggcaaaggacaacaactaccgctccctaccacaaattgggttaaagaaagacctgaaactaccgaacctgttgcagaattatcaactgcttctatctccagccatggttctatagatagcgatgatcctggagatttgcgacttcagggacctgtggcaaatgacaccgacaatgtggctaaagttgctacaaccggtaattcaagtgttgtgcataaggagtgttctagtgccatcaccagaaagggcactaaggaagtgacgatgccaaccaatgctttcttgagtaatcaaattctatctacaagtcccagaggtactgttgttgctgacagttaccagtcaaatttacaaaattcacgaaaggttgttctggacagtgctcccaatagtgtgatgtcaagcccttctcgaagcccaagaatattatgccctgatcagattccaagttcagcattttgggcagttaagcctcatacagatgtaacttttgttgggtctgctcagtgctccagtcctggttcagggcaaacatctgggcataattcagtgggaggtgatatgctagcccagctcttttggcaacctagccgaggtagtccagagtgttcaccaattcccagcccaagaatgacaagccctggtccaagttcaagggtacatagtggaagtgtctctccattgcatccaagggctggtgggatggcacctgaatctccaacaaggcgacttgatgaagggaagaggaagcaaacccacagattgccccttccaccactaagcatatgtaacaattccacctttttgccaaacaattccaccccaactagtcctatctcacatagtcctggtagagtagaaaatccaactagtcctggatcacggtggaagaagggaaagcttgtcggccgtgggacatttggccatgtatacattggctttaacagtgataaaggtgaaatgtgtgcaatgaaggaggtcacccttttctcagacgatcctaaatcaaaagaaagtgcaaagcagttgtgtcaggaaatattacttctgaatcgtctgcaacatccaaatattgtacgatactatggatctgaaatggttgatgataaactttatatatacctggagtatgtttctggtggatccatccataaactactccaggagtatgggcaatttggtgaacctgctatccgcagttataccaagcaaatacttttaggcttggcttatctgcatgcaaaaaatacggttcacagggacattaaaggtgcaaacatactggtagatcctaatggtcgtgtaaagcttgctgacttcggaatggcaaaacatatcaatgggcagcagtgtgccttttcatttaagggtagcccgtactggatggctcctgaggttataaaaaattctaatggatgtaatcttgctgttgacatatggagcttaggatgcacggttttagagatggctacctcaaaaccaccatggagccaatatgaagggattgctgcagtgtttaagataggaaacagtaaggagcttccaccaataccagatcacctctcagaagagggcagagactttataagacagtgcctgcagcgcaatccatccagccgtccaacagcagtggatcttttgcagcattcatttatacgaaatgcatctccacttgaaaaatcactgtcggatccattgctacagttgtctactacatcctgcaaaccagatctgaaggtggtcgggcatgccagaaatatgtcttctttgggtttggaagggcaatccatttaccagagaagagctgctaaattttcttctgtgcacagtgatattcatgtacgaagctatatatcttgccctgtttctccatgtgggagccctcatctgaggtcaagatctccacaacatcaaaatggtataatgtcaccctctccgatttcgagcccaagaactacttcaggtgcttccactcctctgactggtggtaatggagctattccttttaaccatgcaagacacctagcttacaataatgagggtttcacaattacatcgagatgtcttgatgagcccttgccaaaccagcctccagatccggtccttggtcgttttgttagagtgaaacaaccctcgctaggttttcaggagagggcagtccctgaagctgacattctgagccctcaatttggaaggatgggacatgtgagcgtgtggaatttgcatgataagccactgccttctgagcatgcttcacagaagggctttgaggatcgggtaaaacttaagcctccactggatttgagatctggtccaccacaccttgggtgcaaccatggtcattga
More
|
|||||||
| Protein seq | MPPWWGKSSSKEVKKTAKENLIDTFHRLLSPNEQKGRTKSRGNRRHSKDPTAEKGCWSTAQSRSASPSKEVSRCQSFAAARAHAQPLPLPRSRAMVARTASDITESKVVLEKRGKGQQLPLPTTNWVKERPETTEPVAELSTASISSHGSIDSDDPGDLRLQGPVANDTDNVAKVATTGNSSVVHKECSSAITRKGTKEVTMPTNAFLSNQILSTSPRGTVVADSYQSNLQNSRKVVLDSAPNSVMSSPSRSPRILCPDQIPSSAFWAVKPHTDVTFVGSAQCSSPGSGQTSGHNSVGGDMLAQLFWQPSRGSPECSPIPSPRMTSPGPSSRVHSGSVSPLHPRAGGMAPESPTRRLDEGKRKQTHRLPLPPLSICNNSTFLPNNSTPTSPISHSPGRVENPTSPGSRWKKGKLVGRGTFGHVYIGFNSDKGEMCAMKEVTLFSDDPKSKESAKQLCQEILLLNRLQHPNIVRYYGSEMVDDKLYIYLEYVSGGSIHKLLQEYGQFGEPAIRSYTKQILLGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHINGQQCAFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATSKPPWSQYEGIAAVFKIGNSKELPPIPDHLSEEGRDFIRQCLQRNPSSRPTAVDLLQHSFIRNASPLEKSLSDPLLQLSTTSCKPDLKVVGHARNMSSLGLEGQSIYQRRAAKFSSVHSDIHVRSYISCPVSPCGSPHLRSRSPQHQNGIMSPSPISSPRTTSGASTPLTGGNGAIPFNHARHLAYNNEGFTITSRCLDEPLPNQPPDPVLGRFVRVKQPSLGFQERAVPEADILSPQFGRMGHVSVWNLHDKPLPSEHASQKGFEDRVKLKPPLDLRSGPPHLGCNHGH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.531582 | 15.452376 | 14.926825 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0666300 | RBH | 2.548758 | 2.346978 | 5.945659 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g44642 | RBH | 1.712262 | 1.568857 | 1.520938 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0666300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0028170 | RBH | 0.914623 | 20.392406 | 11.636295 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0028270 | RBH | 0.512867 | 5.675719 | 4.086684 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0023250 | RBH | 1.601144 | 10.563928 | 16.130039 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0027730 | RBH | 0.275943 | 0.389569 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0027860 | RBH | 5.356298 | 18.212738 | 14.638666 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0438900 | RBH | 6.979108 | 13.704428 | 19.6937095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0027670 | RBH | 0.186689 | 0.801978 | 1.220491 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0466900 | RBH | 9.0859435 | 13.020211 | 22.878564 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0028000 | RBH | 0.126226 | 0.305857 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0027700 | RBH | 0.093226 | 9.605311 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0028000 | RBH | 0.859764 | 23.933401 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0027870 | RBH | 0.860532 | 1.374213 | 1.596594 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0027570 | RBH | 0.157128 | 7.909753 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G028140 | RBH | 0.125055 | 4.498926 | 2.310654 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0027910 | RBH | 0.249409 | 14.122760 | 5.186516 |
