Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0021980 | OGI:02062280 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:21999992-22003068 | ||||||||
| Gene Symbol | CYP71Z6, Oscyp71Z6 | ||||||||||
| DNA seq | aacgccgacgatcaattaagatggaggacaagctgatactggatctgtgcctatcagcgctgttcgtcgtcgtcctctccaagctggtatcatctgccatgaagccaaggctcaaccttcccccggggccatggacgctgccgctgatcggcagcctccaccacctcgtgatgacgaagagcccccagacccaccgctcgttgcgcgcgctgtcggagaagcacggccccatcatgcagctgtggatgggcgaggtccccgcggtggtcgtgtcgtcgccggcggtggcggaggaggtcctgaagcaccaggacctcaggttcgccgaccgccacctcaccgccaccaccgaggaggtcttcttcggcggccgcgacgtcatattcgggccgtacagcgagcggtggcgccacctccgcaagatctgcatgcaggagctgctcaccgccgcccgggtgaggtcgttccagggcgtccgcgagcgcgaggtggcgcggctcgtgcgtgagctggccgccgacgcgggcgcgggcggcgacgctggtgtgaacctcaacgagaggatcagcaagctcgccaacgacatcgtgatggtgagctccgtcggcggccggtgcagccaccgcgacgagttcctggacgcgctcgaggtcgccaagaagcagatcacgtggctcagcgtcgccgacctgttcccgtcgtccaagctcgcgcggatggtggcggtggcgccacgcaagggcctcgccagccgcaagaggatggagctcgtcataagacggatcatccaagaacggaaggaccagctgatggacgacagcgccgccggcgccggcgaggctgcggcggggaaagactgcttcctcgacgtcctgcttcggctgcagaaggaaggtggcacgccggtcccagttaccgacgaaatcatagtcgtgcttctgtttgtaagtatcacactcacactatatacctatttcctctttatatacttcctccgtccaaaaaaagacaaaccctcagttttcgtgtttaacatttgactgttcgttttatacgcaatttttttataattaatattttcgttgttgttagataattaaaacatgattaatactttatacgtgacttatctttttaattttttcataattttttcaaataagacggacggtcaaacgttgaacacgtaaacccagggtttgtctcttttttttgacggagggagtacaaagtagcacagtgttactcccccatctatcctaaaatatagtaatatatattactaccttcatttaatatcataaatcgtttgacttttttgttagttaattttttttaccaagtttatcgaaaaaaacagcaatattttcgacacaaaatgagtgtattaccaaaattgacaaaatatatgaaatgttaatttgaacgaaactaatttcattttgcagatgttgctaatttttttataaacttagtcaaacctaaagaagtttaattaaaaaaaaagtcaaaatgacttaaaatatgaaacagagagtagtattctctccgtttcatattataagtttgacttttttattagtcaaaattttttaggtttgatcaagtttgtagaaaaaattagcaacatctacgatataagattagttttattaaatttaacattgaatatattttgataatatgtttaacttgtactgaaaatattagtatattttctataaacttttttaaactaaaatatgtttgactaagaaaaaatcaaatgatttataatataaaacagagggagtagtatctagacaacttctaatttagcattaggttgctacatatatatgaacggagcgagtatttattagctgcacgagttttttctcttatttgttggtcttctaagttctaaacttgaataatgtatatgtgtgtgcgtatatatatatattctaggacatggatgactattcataaagtaatttatttatattttacttttttgtaagtaatttttcaacacctaaaaatatcagttcaatatatcatatagattatcaacaaaataaatttatttttggttaaccctacaaattcagaaaaaaaaacattactacagagattcgctaactttcatgcaaattagcactgaagtttaagtcaatgcgttctgtaaatttagttacatattgtgcaagtttatatgatagaagtcatacaactgacgagaaaagcaaataccatttttaggacatgatttcaggggccagtgagacatcgccgacagtgctgatttggaccttggcggaactcatgcggaatccaagaataatggcaaaggcacaagctgaggtaagacaagctgttgctgggaagaccaccatcacggaggatgatattgttgggttgagctaccttaagatggtgattaaggagactttgcgactccatcccccagcgccgttgttgaaccctcgtaaatgccgtgagacgagccaagtcatgggctacaatataccaaagggaacatctgtgttcataaatatgtgggcgatatgtagggactccaggtactgggaggatcctgaggagtataaaccagagagattcgaaaataatagtgtagattataaagggaataacttcgaatttcttccatttggctctggtcgtagaatttgtccaggtataaaccttggggtggccaacttggagctaccattagctagtcttctttatcattttgactggaagctacccaatggaatggcgcctaaggaccttgatatgcatgagacgtctggaatggttgcagctaaactcattactctaaatatatgccctattactcatattgctccaagcagtgcgtaacatccgtcctaatggaatgcatcctcaaagacatcgcatatatatagtagtttactgaaaaaataacgtgctgggagaaaagggtttatatgtatcctatgtacaattgtttgcggggcagactggcctatttgtgtataaactttcatgttgcatgttatacatgatgtatcattccagtgtgtaatgctaccactactttaataatg
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| CDS seq | atggaggacaagctgatactggatctgtgcctatcagcgctgttcgtcgtcgtcctctccaagctggtatcatctgccatgaagccaaggctcaaccttcccccggggccatggacgctgccgctgatcggcagcctccaccacctcgtgatgacgaagagcccccagacccaccgctcgttgcgcgcgctgtcggagaagcacggccccatcatgcagctgtggatgggcgaggtccccgcggtggtcgtgtcgtcgccggcggtggcggaggaggtcctgaagcaccaggacctcaggttcgccgaccgccacctcaccgccaccaccgaggaggtcttcttcggcggccgcgacgtcatattcgggccgtacagcgagcggtggcgccacctccgcaagatctgcatgcaggagctgctcaccgccgcccgggtgaggtcgttccagggcgtccgcgagcgcgaggtggcgcggctcgtgcgtgagctggccgccgacgcgggcgcgggcggcgacgctggtgtgaacctcaacgagaggatcagcaagctcgccaacgacatcgtgatggtgagctccgtcggcggccggtgcagccaccgcgacgagttcctggacgcgctcgaggtcgccaagaagcagatcacgtggctcagcgtcgccgacctgttcccgtcgtccaagctcgcgcggatggtggcggtggcgccacgcaagggcctcgccagccgcaagaggatggagctcgtcataagacggatcatccaagaacggaaggaccagctgatggacgacagcgccgccggcgccggcgaggctgcggcggggaaagactgcttcctcgacgtcctgcttcggctgcagaaggaaggtggcacgccggtcccagttaccgacgaaatcatagtcgacatgatttcaggggccagtgagacatcgccgacagtgctgatttggaccttggcggaactcatgcggaatccaagaataatggcaaaggcacaagctgaggtaagacaagctgttgctgggaagaccaccatcacggaggatgatattgttgggttgagctaccttaagatggtgattaaggagactttgcgactccatcccccagcgccgttgttgaaccctcgtaaatgccgtgagacgagccaagtcatgggctacaatataccaaagggaacatctgtgttcataaatatgtgggcgatatgtagggactccaggtactgggaggatcctgaggagtataaaccagagagattcgaaaataatagtgtagattataaagggaataacttcgaatttcttccatttggctctggtcgtagaatttgtccaggtataaaccttggggtggccaacttggagctaccattagctagtcttctttatcattttgactggaagctacccaatggaatggcgcctaaggaccttgatatgcatgagacgtctggaatggttgcagctaaactcattactctaaatatatgccctattactcatattgctccaagcagtgcgtaa
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| Protein seq | MEDKLILDLCLSALFVVVLSKLVSSAMKPRLNLPPGPWTLPLIGSLHHLVMTKSPQTHRSLRALSEKHGPIMQLWMGEVPAVVVSSPAVAEEVLKHQDLRFADRHLTATTEEVFFGGRDVIFGPYSERWRHLRKICMQELLTAARVRSFQGVREREVARLVRELAADAGAGGDAGVNLNERISKLANDIVMVSSVGGRCSHRDEFLDALEVAKKQITWLSVADLFPSSKLARMVAVAPRKGLASRKRMELVIRRIIQERKDQLMDDSAAGAGEAAAGKDCFLDVLLRLQKEGGTPVPVTDEIIVDMISGASETSPTVLIWTLAELMRNPRIMAKAQAEVRQAVAGKTTITEDDIVGLSYLKMVIKETLRLHPPAPLLNPRKCRETSQVMGYNIPKGTSVFINMWAICRDSRYWEDPEEYKPERFENNSVDYKGNNFEFLPFGSGRRICPGINLGVANLELPLASLLYHFDWKLPNGMAPKDLDMHETSGMVAAKLITLNICPITHIAPSSA |
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| Function | Ent-isokaurene C2/C3-hydroxylase [UniProtKB/Swiss-Prot:A3A871] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0021980 | OsCMeo_02g0021980.01 | Chr02 | 22000001 | 22003068 | + | NAM | ||
| CDS seq | atggaggacaagctgatactggatctgtgcctatcagcgctgttcgtcgtcgtcctctccaagctggtatcatctgccatgaagccaaggctcaaccttcccccggggccatggacgctgccgctgatcggcagcctccaccacctcgtgatgacgaagagcccccagacccaccgctcgttgcgcgcgctgtcggagaagcacggccccatcatgcagctgtggatgggcgaggtccccgcggtggtcgtgtcgtcgccggcggtggcggaggaggtcctgaagcaccaggacctcaggttcgccgaccgccacctcaccgccaccaccgaggaggtcttcttcggcggccgcgacgtcatattcgggccgtacagcgagcggtggcgccacctccgcaagatctgcatgcaggagctgctcaccgccgcccgggtgaggtcgttccagggcgtccgcgagcgcgaggtggcgcggctcgtgcgtgagctggccgccgacgcgggcgcgggcggcgacgctggtgtgaacctcaacgagaggatcagcaagctcgccaacgacatcgtgatggtgagctccgtcggcggccggtgcagccaccgcgacgagttcctggacgcgctcgaggtcgccaagaagcagatcacgtggctcagcgtcgccgacctgttcccgtcgtccaagctcgcgcggatggtggcggtggcgccacgcaagggcctcgccagccgcaagaggatggagctcgtcataagacggatcatccaagaacggaaggaccagctgatggacgacagcgccgccggcgccggcgaggctgcggcggggaaagactgcttcctcgacgtcctgcttcggctgcagaaggaaggtggcacgccggtcccagttaccgacgaaatcatagtcgacatgatttcaggggccagtgagacatcgccgacagtgctgatttggaccttggcggaactcatgcggaatccaagaataatggcaaaggcacaagctgaggtaagacaagctgttgctgggaagaccaccatcacggaggatgatattgttgggttgagctaccttaagatggtgattaaggagactttgcgactccatcccccagcgccgttgttgaaccctcgtaaatgccgtgagacgagccaagtcatgggctacaatataccaaagggaacatctgtgttcataaatatgtgggcgatatgtagggactccaggtactgggaggatcctgaggagtataaaccagagagattcgaaaataatagtgtagattataaagggaataacttcgaatttcttccatttggctctggtcgtagaatttgtccaggtataaaccttggggtggccaacttggagctaccattagctagtcttctttatcattttgactggaagctacccaatggaatggcgcctaaggaccttgatatgcatgagacgtctggaatggttgcagctaaactcattactctaaatatatgccctattactcatattgctccaagcagtgcgtaa
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| Protein seq | MEDKLILDLCLSALFVVVLSKLVSSAMKPRLNLPPGPWTLPLIGSLHHLVMTKSPQTHRSLRALSEKHGPIMQLWMGEVPAVVVSSPAVAEEVLKHQDLRFADRHLTATTEEVFFGGRDVIFGPYSERWRHLRKICMQELLTAARVRSFQGVREREVARLVRELAADAGAGGDAGVNLNERISKLANDIVMVSSVGGRCSHRDEFLDALEVAKKQITWLSVADLFPSSKLARMVAVAPRKGLASRKRMELVIRRIIQERKDQLMDDSAAGAGEAAAGKDCFLDVLLRLQKEGGTPVPVTDEIIVDMISGASETSPTVLIWTLAELMRNPRIMAKAQAEVRQAVAGKTTITEDDIVGLSYLKMVIKETLRLHPPAPLLNPRKCRETSQVMGYNIPKGTSVFINMWAICRDSRYWEDPEEYKPERFENNSVDYKGNNFEFLPFGSGRRICPGINLGVANLELPLASLLYHFDWKLPNGMAPKDLDMHETSGMVAAKLITLNICPITHIAPSSA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0021980 | OsCMeo_02g0021980.02 | Chr02 | 21999992 | 22003061 | + | IsoSeq | ||
| CDS seq | atggacgctgccgctgatcggcagcctccaccacctcgtgatgacgaagagcccccagacccaccgctcgttgcgcgcgctgtcggagaagcacggccccatcatgcagctgtggatgggcgaggtccccgcggtggtcgtgtcgtcgccggcggtggcggaggaggtcctgaagcaccaggacctcaggttcgccgaccgccacctcaccgccaccaccgaggaggtcttcttcggcggccgcgacgtcatattcgggccgtacagcgagcggtggcgccacctccgcaagatctgcatgcaggagctgctcaccgccgcccgggtgaggtcgttccagggcgtccgcgagcgcgaggtggcgcggctcgt
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| Protein seq | MDAAADRQPPPPRDDEEPPDPPLVARAVGEARPHHAAVDGRGPRGGRVVAGGGGGGPEAPGPQVRRPPPHRHHRGGLLRRPRRHIRAVQRAVAPPPQDLHAGAAHRRPGEVVPGRPRARGGAAR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr02 | 22000923 | 22002236 | + | OsCMeo_02g0021980.02 | OsCMeo_02g0021980.01,OsCMeo_02g0021980.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.471932 | 0.0 | 1.355538 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0570500 | RBH | 1.340120 | 1.922802 | 0.345323 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g36150 | RBH | 0.894188 | 1.347454 | 0.560761 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0570500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0021860 | RBH | 0.414510 | 0.0 | 0.536884 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021970 | RBH | 0.536192 | 0.0 | 3.323107 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0012170 | RBH | 2.684195 | 8.254560 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0021670 | RBH | 0.040751 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0021620 | RBH | 1.743141 | 0.0 | 4.028121 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0357700 | RBH | 3.9247745 | 0.0377075 | 0.0068725 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0021350 | RBH | 0.0 | 0.0 | 0.104563 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0384700 | RBH | 4.264566 | 0.0732895 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0021790 | RBH | 0.094214 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0021530 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021990 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021700 | RBH | 0.275717 | 0.0 | 0.353654 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021520 | RBH | 0.231542 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021980 | RBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021740 | RBH | 0.0 | 0.0 | 1.988547 |
