Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0017420 | OGI:02049350 | 3/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:17017734-17019338 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttatgaaagccactgaaagacaatatttacattttgtaacgtattattacatttctcaatacattttgtaaatttcattatatttcactgaaatacaatccttatatttcgtaacgtgttattacatttctcaatatatttcgtaaattttgagtgtatttacatgttttctatgatgtacggcaggacagtaactggggaggacagtgggacagcggcgggggtgcaggcagttcgtggcggcgcgatggcaatggcggaggccgctcgggcatcgaggatagcggtggattgtgttgggcgagggtagtaggacgacagaggggcggaggcagctcggggtggcgggcagtagcggaggccgcttggggcgccgaggacagcagtagatggcggcaagcaagggcggggtacggaggcagctcagggtgggcaagatggtggcgggaggtggcgaaggctgctcggggcgggcagatggcggcggggtggcggcgtggctgaggcaacaatggggcggcatgtgagcgccgtcgggatggtgcagcactgccggcacatgcctcatcctcgtcgtcggcatccgtgcgtgcgagagagaggtttgagaggggagagagagaggagagagatctgatgggtgggccccatcgattagttgataaaagaattgttgactgaactaccacgtaggaccaaaaccgctctcaaagctatttaagggagttttcatcctgtattgatagttgaaggtgaaagatatcttatttttgagttcaaggggtaattcgtaatcacataataacttaggggcgtaattcgggtatggaccagtgaagtgaagtcactcgcggagatgcaagtattataggagtagaagcaaagctccatcgctctgcagctaaccacgagcaacacaaaccacacctgttctgcggcgagacaatggcgtcgcaaccggccgctcacgccgctggcctccgcgtcctccgcacgacgcgcgtcgcgccggcgccgcccgccggcgagcccgcgctgcccgagcgagccctgcctctcatgttcatggacgcgatgtggctccgcgcccagcccgtcgagcgcgtcttcttctaccgactcggccccggcgacgacgacgacgacggtggtgtcgacgccgtgctgtcccggatggaggagtcgctgccccgggctatccacgccttctacccgctcgccagccgcatccgccccacgcccagcgagaccaaccggtacgagctcctctaccagctcggcgacggcgtggcgttcaccgtcgccgagcacgacggcgtcggcgtcgacgagctcgccacggacgagccgagggagctcgccaagatcgcgccgctcgtcccggagcttcccgagggcggcgcggtgctcgcgctgcaggtgaccgtgctgccgcccaagcgccgcggcctcgctctcggcgtcatcgtccaccactccgcctgcgacggggtgggctcgacgcacttcctccacacctgggccgcagcctgcgccggcgaccggaagctcccggagctgcccgtaatcgaccgcacgctcatccgcgacgtaccggacaggcat
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| CDS seq | atgcctgtccggtacgtcgcggatgagcgtgcggtcgattacgggcagctccgggagcttccggtcgccggcgcaggctgcggcccaggtgtggaggaagtgcgtcgagcccaccccgtcgcaggcggagtggtggacgatgacgccgagagcgaggccgcggcgcttgggcggcagcacggtcacctgcagcgcgagcaccgcgccgccctcgggaagctccgggacgagcggcgcgatcttggcgagctccctcggctcgtccgtggcgagctcgtcgacgccgacgccgtcgtgctcggcgacggtgaacgccacgccgtcgccgagctggtagaggagctcgtaccggttggtctcgctgggcgtggggcggatgcggctggcgagcgggtagaaggcgtggatagcccggggcagcgactcctccatccgggacagcacggcgtcgacaccaccgtcgtcgtcgtcgtcgccggggccgagtcggtagaagaagacgcgctcgacgggctgggcgcggagccacatcgcgtccatgaacatgagaggcagggctcgctcgggcagcgcgggctcgccggcgggcggcgccggcgcgacgcgcgtcgtgcggaggacgcggaggccagcggcgtgagcggccggttgcgacgccattgtctcgccgcagaacagtggctttcataa
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| Protein seq | MPVRYVADERAVDYGQLRELPVAGAGCGPGVEEVRRAHPVAGGVVDDDAESEAAALGRQHGHLQREHRAALGKLRDERRDLGELPRLVRGELVDADAVVLGDGERHAVAELVEELVPVGLAGRGADAAGERVEGVDSPGQRLLHPGQHGVDTTVVVVVAGAESVEEDALDGLGAEPHRVHEHERQGSLGQRGLAGGRRRRDARRAEDAEASGVSGRLRRHCLAAEQWLS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0017420 | OsCMeo_02g0017420.01 | Chr02 | 17017734 | 17019338 | - | NAM | ||
| CDS seq | atgcctgtccggtacgtcgcggatgagcgtgcggtcgattacgggcagctccgggagcttccggtcgccggcgcaggctgcggcccaggtgtggaggaagtgcgtcgagcccaccccgtcgcaggcggagtggtggacgatgacgccgagagcgaggccgcggcgcttgggcggcagcacggtcacctgcagcgcgagcaccgcgccgccctcgggaagctccgggacgagcggcgcgatcttggcgagctccctcggctcgtccgtggcgagctcgtcgacgccgacgccgtcgtgctcggcgacggtgaacgccacgccgtcgccgagctggtagaggagctcgtaccggttggtctcgctgggcgtggggcggatgcggctggcgagcgggtagaaggcgtggatagcccggggcagcgactcctccatccgggacagcacggcgtcgacaccaccgtcgtcgtcgtcgtcgccggggccgagtcggtagaagaagacgcgctcgacgggctgggcgcggagccacatcgcgtccatgaacatgagaggcagggctcgctcgggcagcgcgggctcgccggcgggcggcgccggcgcgacgcgcgtcgtgcggaggacgcggaggccagcggcgtgagcggccggttgcgacgccattgtctcgccgcagaacagtggctttcataa
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| Protein seq | MPVRYVADERAVDYGQLRELPVAGAGCGPGVEEVRRAHPVAGGVVDDDAESEAAALGRQHGHLQREHRAALGKLRDERRDLGELPRLVRGELVDADAVVLGDGERHAVAELVEELVPVGLAGRGADAAGERVEGVDSPGQRLLHPGQHGVDTTVVVVVAGAESVEEDALDGLGAEPHRVHEHERQGSLGQRGLAGGRRRRDARRAEDAEASGVSGRLRRHCLAAEQWLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0484975 | SBH | 0.164407 | 0.168603 | 1.205488 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0484975 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0017520 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0017350 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0017270 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0017150 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0016930 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0017450 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0017020 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0017580 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0017430 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0017070 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G017520 | SBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0017250 | SBH | 0.000000 | 0.0 | 0.0 |
