Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0006380 | OGI:02014320 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:4702740-4705708 | ||||||||
| Gene Symbol | EIP7 | ||||||||||
| DNA seq | gctgaccgaccaaccaacccccccccaaaaaaaaaagaaaaagaaaaaaaaaccagcaaatttcccttcccatgcgacgcgacctcctcctcggcgactagccggcgaactcgcgcacgccacctcggcccacccaggcccaggcccacctcgccgtggatcgccggagtagggggttgccggccggagcggcggctaccaccagatggtcggcggcgggggcgagtagcgcgacggcggcggcgaggacgacgagcggcggacggatctgcggcgcggcggggcggcgggggcgggggccaccatgtctgccgtagtgtgtgggaagaggtcctcctccatcttcggcgacgagctcatcccttcctcccctccctccccatcccctccccaccaccaccaccaccccgccaagcgctcccgctgctccccggcccgcgccttcgacgaggcgactcaccgccgggaggcgctcctgcaccatctcctctccctcttcccccacatggatccccaggttcgcctccgagctctacttatatcgctattatttcgatttttttttgtgggagtttgcaattggatgcgaagaggtgaatctccgtccagtaaattatgtggcttgttgggttaaattctctggtgcctggagctaaggatgcaatagctaatagctactaccaactatgatgctgcagaaatgttgaacaatagttagatagcaatggcctatccatttttgcaaccaacctttaggaatcgaagtgctactaatatatcatgtccatccgatctccgatgatctgatggctggccatgttttcactaattttacagtattcaggaatgtaagtgtgaatgtgtaatcaacaaatacggcaaatgtgtttttttttgtcagcaccttttgctatcttcaattgagcatgcatatactgtaagaaactggattggatcgcattcgtcatgtacattttttgcaactaaagggtgtttccatcacagctatgtggtgtttatatttttagctgtttgatgatgagtttccgcatgattacagttacttgaaagagctcttgaggcatctggagatgatatagattctgctataaagagtttgaacgagctgtgcctggaatcggctgcggtaggtgattccaatagcgtcctgccagccgctcttaagttatcagctgaaggtacgtctgttgaatttagacagttgcatgctaaacatccagacattcattgttcatactttcctgtgttgcgctggtccaatttgattgttcatagacatgttggatacctgaagctgtgaatttgaactctctgtttggcatattccccacctctctgctatgcctttattgtaatgtactgtagcatttttatgggcaacctgccattagcgtgtaacaccagagttgggtgataaactgaagtgccatgttcttatatcccgtttaaatatgatatgttttagttgattgtggtgtgttcattaatggacaatccacaattgtgagtactgagtagtgtcaaggatgaacttccattgtgatatgcggttctctagcctcagtatttatttgaagttactgtgcatgcttctacttcatgctcctatagcaagttatcaagctgggtggttccattttcaattggcctatgacatgacacatgtactatatttggttccttctaggatatgtccaagcttgattgccaacttatgtttgccatgtcttcatgaactatgcctctttcatgaattaaatttctccaaaaaatgcctgctaaatgtcagcttgcaatcttggacaggtgttgttaataatggacatttggatgtgctcactgaaaacccacatgctacagaaaactttcagacaaatcatcatggttctgagtgggttgagctatttgttagagagatgatgagtgcatcagacatagatgatgcgcgggctcgtgcctcaagagccctggaggcattggagaaatccataatggagcgagcaggaactgaagcagtgcataatttgcacaaggtgcaaccaacagcatatgcacgtttcatccatagtacttgtactcctaggcaaattaagcagttatgctttgctttcctgcaggaaaatgtgatgctgaaggagcaactggcaatatatctgagagagaacgctgttctgaagaggggggttgctatccaacatgaacgtcaaaaagagtttgacgagaggactcaggaggttcatagcctgaaacaactggttttgcagtatcaggaacagataaaaactcttgaggtactactccttactcctggtgattcttttgtcccgaacactactcccggtgattttgattgttcttacataagtatatttaacattgcagataaataattatgcacttagagtgcatctgaagcaagctcagcagaacaattctatgcctgggcgtttccctcctgatgtcttttaacagattttgagggcaatattccctctcatagtcttatactcaatcataccaagatatcatatgatgcaaggggttgacctattgctcatggtgtggttagacacttagactattcacccttacgtccaaatcataaacaagcaacgatcctcaaaatggagaaaagcaagcaacggtgaagcatcaattgaggtgtagattaatgtgtgcaccaggaagcttgagtgcttgacccttctctcagaccattgattgtatgtaaagtatggtgagatgtattgtagcatgtaattcaaagtatgaaaggacctgttcactgtattgtagtagcatgtaatacaatttatacaaagcatgagaggatctgttcattgtatcgtacgtatccactgatatatttattccgataaaagaatgcttatcagatgaaagtttccattgttccgtacttttaaaaatttatatcaatatttttatcc
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| CDS seq | atgtctgccgtagtgtgtgggaagaggtcctcctccatcttcggcgacgagctcatcccttcctcccctccctccccatcccctccccaccaccaccaccaccccgccaagcgctcccgctgctccccggcccgcgccttcgacgaggcgactcaccgccgggaggcgctcctgcaccatctcctctccctcttcccccacatggatccccagttacttgaaagagctcttgaggcatctggagatgatatagattctgctataaagagtttgaacgagctgtgcctggaatcggctgcggtaggtgattccaatagcgtcctgccagccgctcttaagttatcagctgaaggtgttgttaataatggacatttggatgtgctcactgaaaacccacatgctacagaaaactttcagacaaatcatcatggttctgagtgggttgagctatttgttagagagatgatgagtgcatcagacatagatgatgcgcgggctcgtgcctcaagagccctggaggcattggagaaatccataatggagcgagcaggaactgaagcagtgcataatttgcacaaggaaaatgtgatgctgaaggagcaactggcaatatatctgagagagaacgctgttctgaagaggggggttgctatccaacatgaacgtcaaaaagagtttgacgagaggactcaggaggttcatagcctgaaacaactggttttgcagtatcaggaacagataaaaactcttgagataaataattatgcacttagagtgcatctgaagcaagctcagcagaacaattctatgcctgggcgtttccctcctgatgtcttttaa
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| Protein seq | MSAVVCGKRSSSIFGDELIPSSPPSPSPPHHHHHPAKRSRCSPARAFDEATHRREALLHHLLSLFPHMDPQLLERALEASGDDIDSAIKSLNELCLESAAVGDSNSVLPAALKLSAEGVVNNGHLDVLTENPHATENFQTNHHGSEWVELFVREMMSASDIDDARARASRALEALEKSIMERAGTEAVHNLHKENVMLKEQLAIYLRENAVLKRGVAIQHERQKEFDERTQEVHSLKQLVLQYQEQIKTLEINNYALRVHLKQAQQNNSMPGRFPPDVF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0006380 | OsCMeo_02g0006380.02 | Chr02 | 4702779 | 4705657 | + | NAM | ||
| CDS seq | atggatccccagttacttgaaagagctcttgaggcatctggagatgatatagattctgctataaagagtttgaacgagctgtgcctggaatcggctgcggtaggtgattccaatagcgtcctgccagccgctcttaagttatcagctgaaggtgttgttaataatggacatttggatgtgctcactgaaaacccacatgctacagaaaactttcagacaaatcatcatggttctgagtgggttgagctatttgttagagagatgatgagtgcatcagacatagatgatgcgcgggctcgtgcctcaagagccctggaggcattggagaaatccataatggagcgagcaggaactgaagcagtgcataatttgcacaaggaaaatgtgatgctgaaggagcaactggcaatatatctgagagagaacgctgttctgaagaggggggttgctatccaacatgaacgtcaaaaagagtttgacgagaggactcaggaggttcatagcctgaaacaactggttttgcagtatcaggaacagataaaaactcttgagataaataattatgcacttagagtgcatctgaagcaagctcagcagaacaattctatgcctgggcgtttccctcctgatgtcttttaa
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| Protein seq | MDPQLLERALEASGDDIDSAIKSLNELCLESAAVGDSNSVLPAALKLSAEGVVNNGHLDVLTENPHATENFQTNHHGSEWVELFVREMMSASDIDDARARASRALEALEKSIMERAGTEAVHNLHKENVMLKEQLAIYLRENAVLKRGVAIQHERQKEFDERTQEVHSLKQLVLQYQEQIKTLEINNYALRVHLKQAQQNNSMPGRFPPDVF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0006380 | OsCMeo_02g0006380.01 | Chr02 | 4702740 | 4705708 | + | NAM | ||
| CDS seq | atgtctgccgtagtgtgtgggaagaggtcctcctccatcttcggcgacgagctcatcccttcctcccctccctccccatcccctccccaccaccaccaccaccccgccaagcgctcccgctgctccccggcccgcgccttcgacgaggcgactcaccgccgggaggcgctcctgcaccatctcctctccctcttcccccacatggatccccagttacttgaaagagctcttgaggcatctggagatgatatagattctgctataaagagtttgaacgagctgtgcctggaatcggctgcggtaggtgattccaatagcgtcctgccagccgctcttaagttatcagctgaaggtgttgttaataatggacatttggatgtgctcactgaaaacccacatgctacagaaaactttcagacaaatcatcatggttctgagtgggttgagctatttgttagagagatgatgagtgcatcagacatagatgatgcgcgggctcgtgcctcaagagccctggaggcattggagaaatccataatggagcgagcaggaactgaagcagtgcataatttgcacaaggaaaatgtgatgctgaaggagcaactggcaatatatctgagagagaacgctgttctgaagaggggggttgctatccaacatgaacgtcaaaaagagtttgacgagaggactcaggaggttcatagcctgaaacaactggttttgcagtatcaggaacagataaaaactcttgagataaataattatgcacttagagtgcatctgaagcaagctcagcagaacaattctatgcctgggcgtttccctcctgatgtcttttaa
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| Protein seq | MSAVVCGKRSSSIFGDELIPSSPPSPSPPHHHHHPAKRSRCSPARAFDEATHRREALLHHLLSLFPHMDPQLLERALEASGDDIDSAIKSLNELCLESAAVGDSNSVLPAALKLSAEGVVNNGHLDVLTENPHATENFQTNHHGSEWVELFVREMMSASDIDDARARASRALEALEKSIMERAGTEAVHNLHKENVMLKEQLAIYLRENAVLKRGVAIQHERQKEFDERTQEVHSLKQLVLQYQEQIKTLEINNYALRVHLKQAQQNNSMPGRFPPDVF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.864077 | 23.111265 | 12.551795 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0184500 | RBH | 4.223911 | 5.357716 | 9.534094 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09180 | RBH | 2.543940 | 3.492294 | 2.068275 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0184500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006450 | RBH | 2.252283 | 18.856009 | 9.295488 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006590 | RBH | 0.566652 | 5.215292 | 3.664628 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023960 | RBH | 2.936509 | 24.604530 | 19.565390 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006310 | RBH | 0.346287 | 0.420726 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006360 | RBH | 12.280576 | 28.230570 | 20.226273 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0080100 | RBH | 19.4368325 | 30.0240775 | 41.657713 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006330 | RBH | 0.866177 | 2.027758 | 2.850605 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0082600 | RBH | 23.524009 | 31.3201235 | 25.0314915 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006730 | RBH | 0.718164 | 0.299468 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006290 | RBH | 1.526539 | 11.169068 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006590 | RBH | 6.057637 | 43.102661 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006570 | RBH | 2.278390 | 1.893828 | 2.521292 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006340 | RBH | 0.926589 | 6.411770 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006470 | RBH | 1.206519 | 4.846386 | 6.214394 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006430 | RBH | 3.170042 | 31.251354 | 11.481227 |
