Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0046540 | OGI:01071950 | 1/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:42470345-42470569 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctacatcactgacgtccgctcgctctcgtcgacgttaccatcttcttcgaactcatcggctagttgctcgaggagaatgccggccggagcgtcactactcggtgcccgcaaggcgtcaccagctccagccacgtcgcaagccatctcgtcggagttgtcggggacgtcgtcgagccgcctgagtccgtagacgacgcaacgctgccaagcgatgctcgccatcat |
||||||||||
| CDS seq | atgatggcgagcatcgcttggcagcgttgcgtcgtctacggactcaggcggctcgacgacgtccccgacaactccgacgagatggcttgcgacgtggctggagctggtgacgccttgcgggcaccgagtagtgacgctccggccggcattctcctcgagcaactagccgatgagttcgaagaagatggtaacgtcgacgagagcgagcggacgtcagtgatgtag |
||||||||||
| Protein seq | MMASIAWQRCVVYGLRRLDDVPDNSDEMACDVAGAGDALRAPSSDAPAGILLEQLADEFEEDGNVDESERTSVM |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0046540 | OsCMeo_01g0046540.01 | Chr01 | 42470345 | 42470569 | - | NAM | ||
| CDS seq | atgatggcgagcatcgcttggcagcgttgcgtcgtctacggactcaggcggctcgacgacgtccccgacaactccgacgagatggcttgcgacgtggctggagctggtgacgccttgcgggcaccgagtagtgacgctccggccggcattctcctcgagcaactagccgatgagttcgaagaagatggtaacgtcgacgagagcgagcggacgtcagtgatgtag
More
|
|||||||
| Protein seq | MMASIAWQRCVVYGLRRLDDVPDNSDEMACDVAGAGDALRAPSSDAPAGILLEQLADEFEEDGNVDESERTSVM |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g39980 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0046640 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0046150 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0046570 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0022230 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0003030 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0391600 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0002930 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0164800 | SBH | 0 | 0.005058 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0019890 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0011550 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0005210 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0003050 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0003000 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G005350 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0011730 | SBH | 0.0 | 0.0 | 0.0 |
