Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0034970 | OGI:01077750 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:33439456-33439881 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttaaccattgatcttttgaacctacataacaaatttatatattagcatttgcattgcaaatatagtattcatcatatatatattacatgaaggtattatgagcatacacaaaatgaaggccaagcaatcgacattccttcataatgggcatcaccaattgtcttgcagtgctttagtggccttacgagctcttcatcttccttaagtggatgattgacaaccactttagtgaactcgttaccaatctcaacaccatccactttgtctcttgggttactactcaaataagtagcatatgccacagtttctttgttaggatattttgcagtcaccaagattattgtggtaccaacctacaatagaaataatgtattcattaagaaatatacaataattaattgttaaacaataatttagtagtaccat
More
|
||||||||||
| CDS seq | atggttggtaccacaataatcttggtgactgcaaaatatcctaacaaagaaactgtggcatatgctacttatttgagtagtaacccaagagacaaagtggatggtgttgagattggtaacgagttcactaaagtggttgtcaatcatccacttaaggaagatgaagagctcgttcaaaagatcaatggttaa |
||||||||||
| Protein seq | MVGTTIILVTAKYPNKETVAYATYLSSNPRDKVDGVEIGNEFTKVVVNHPLKEDEELVQKING |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0034970 | OsCMeo_01g0034970.01 | Chr01 | 33439456 | 33439881 | - | NAM | ||
| CDS seq | atggttggtaccacaataatcttggtgactgcaaaatatcctaacaaagaaactgtggcatatgctacttatttgagtagtaacccaagagacaaagtggatggtgttgagattggtaacgagttcactaaagtggttgtcaatcatccacttaaggaagatgaagagctcgttcaaaagatcaatggttaa |
|||||||
| Protein seq | MVGTTIILVTAKYPNKETVAYATYLSSNPRDKVDGVEIGNEFTKVVVNHPLKEDEELVQKING |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g56260 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0015680 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0030400 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0015140 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029710 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0422900 | RBH | 0 | 0 | 0.0149285 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0029440 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0281200 | SBH | 0.0246435 | 0 | 0.8189765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0015120 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029640 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029910 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0015200 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029860 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G025470 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0030010 | SBH | 0.0 | 0.0 | 0.0 |
