Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0034350 | OGI:01096370 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:33007262-33012280 | ||||||||
| Gene Symbol | PK7, OsPK7, OsPK07, OsCIPK12, CIPK12, OsSnRK3.6, SnRK3.6 | ||||||||||
| DNA seq | agtaacattataaaacagagcatcaaattcttatattacaataggctatatcttatattatgatatgattataatcattgtcattgtcgatcctaactatcacatggaattttcatgattttactttttaagcgtatttccattattatgctgatctctttcacataatctttgtaggatgaaatatgatccctgtatctgttgggttagaaatgctgcatttccacgacatatccgttgaggagtgtagataccaggaaattggcacggtggggaatatcaccaagagtacaggtcgttatagtgatagctttcacacaaatccaaggttaatcatgccatgtcatgattaaatgaatgcatacctcaaattgttatgtaccttaaagcatctcactgagccatatgaaatcgccggttcgccactgttgtctccatcgatgaccacccgtgtccataactccatattcgaagttcgaatccacaaaaagagcattgtataacagaatacgacataccacggtgatctttatcacggaaatgcgcaacaacgggcccgccgccgactgcagagccgtgcgccaccacaaacggcgcggcgctctcgtggcccgagccggccgccaccactgccggggtaggccaaccatgccacccaccgatgctctcacgtgctcggtgacctcagccaaagccgctgcagcacagcaggtccaagtaatctcgacccccagtccccacaggccccaaccaaccaaccgcactgcagtgcccaaatctgtcacctcgcatccaataatgggctaatggcatcaggaatggaagattcggaatccaatcggtcggcacatgcccggctcatgcatatccctcccatacctcaatcaactgtcccccgaccagaatcatggttaccacaaaattattcgatgctgccaaagaaaccaaaccgcagatgcacacagccgctaagtcgagagaaaactggccagtacaatccactttaaacgcccacctgggcaccaccacaaccagggtatctacatccactttaaacgcccacctgggcaccatccacaaccggagtatctacatccactgtctcgatccattgcctaaaaacgatcttaggccatccagagaaagagaactcttgctagttatcaaaaccacgagctcatcaacgggaaccagaccggtcaggtttggtccggtaaaagagatctccctgtcaactgcatggaagctcctgtctctagctcatgctgccttctgttcctatcaacttcagggtgaggggagcctgtaagcttgaagacctgcaggacaagaaggaaataatcaaatgtcagtctgttagtcttatcacacttgtatgtaataacagcaatagacttctatttcctattgagttctgaactatgagaaccaaagcaatagtttccggttgtagtagcatttcaaacaattcaaatggactataacagttcactggcaaaagcaaaattcttcaaggtaaattgaagattcaaaacaagactacagaacagctccaggtacacccacgtaccatggagcatatttgaaccaactttcctaactgatgctagtattgcgcagtacagaatgtactactccgatggaggaaaattaggttgacaaatgtaacaaaaagtcttctggaaacacacctatctacctccgaggcacagcttacgcacataaccctccttacctctgaaggtaaatgtgtcccatgtgttctcctataatggtgggtggctaacatgtgcaccagattaagtgttcaacaaagatccatcaaagtataaagttatcattaatgaaaaaaaagataatttatcaataacagcaatgaaactgaaaagaaaggaacctcctaaaatcaggaattagagcccatttgaatgtaaaaagaaactagaaaccatcaaaaactcacaggttaaaatagtagaaatggtttgcatgaatagtatatggtgttgctatgcgccctttctgttttgtaattttcaatgtctcagccatgatgtttgcattttcatggtttcaccaaattaaatagataaaatctaccaggtttcccataaagcaacctgttattactatgtcagagggagctacaccagataataaacctatacagcactttcaacatttacctagcatgctgaaaatctagtgaagcacatgttctttgtaaaaatgacatttcggtactcggaggtactgccaagcattcccttcaagctcccattctatcccatatgctgatgtgcagcacaatgccaatccatggaagttggtgataacaacaatggggaaaccagaaggacatgatattggcggttcctttctatatttgttttcaaaagttttttcaatatgaattatgacacatgtaaacattcaacaccaataaatgctggggtaacatggaatcatcatcaatactggattgaattccattatccaaaaaaaatggaaacataaagaaaaataaataagagcaggaagtttacaagctaaggtgcagtagaacagtgcataatcactttttaaagtaactccaaaagatagataagacaagcgaaaatgttttcattaactgatgactagaaaagacatttatcttatacaatctatcacaagctaaaaagtccataagaatagggtgcgggaaagattttacgaaaaattgagttcgtagcatagattaaaagagcacagatgttagataaaccaaatcatgctctagaatgaaacaaaacaatctataatcagtttaacagccacaaactaggatgattagaaccattcaaatttgcttcttttcacgaagcacacttgcaatggtcaagtggcagcaaatttccagacatacgcattatccaagcgctgtgaaattggattgcaggaggcaagctagttaatggttggcaaaatctaacagcaaagcctatagcattctttcaccactctagaaataataaaagttccagttgttcgaggttttcaattgcaaggctttcctactttaaattgtgtccgtgcaaggaaatctaattccttctacatactggtattaggcaataggcatgattgtgaattaaacatacgttaacaaaaacaaatagcatgaataaaaatcaattaacttttagcaaacaaactcttgaacgctcaatttgaaatacaggatgtatagtcaagaagtgaaacattgttatgtaattattggaactgaagcatcaatcaatttaactttctgcccggttgcgcatgttaaacaacacaaaatccttgcttccctatttagctacaatgcatataagtaaaatcaggagagaatcattacctttcaaccttctcaatcacaggagttccatttggagctgggagcatctggtgcacaaggtgctgcattcctggcttcaactccatgttgcagaaatcctcatactcttcattatcacctgcctttctttttacttccactactacaagggagggtgtaagctcaaatatctccgcgcctatggttagaggccccttaactccttcgcgtgtaccctctatgctcacccgccagtccttcctccgcactgtgaagctcttgacctttgcaatctcctccagcttttttacaatgtcagacatgggctcaccagatacaaacctgatctcgttccccctctcctcaaacagcccagacaagttgaatccttttgagaatgatatgatatcaaatgcattaaggcttgctgggcgtggtagtgacccacggactctctggctctccccagttgacaatgtggccgggcaggatacgactgatgaatctgactcagaccctgaaccatcaggatcatccccttgtggaggtggaggaacaggaggtgccaaacccaatggtgggggaacaggatcagcaggctccaagttcagcacgtcatcagacaggttgtagagcttgtcatcctcaatgtaaaacttgactggcttgtatcctttcttgaaccaatcgctctcaatgatctctggcacggtgatcctagttttggggtttgcgtcaagaaggcgcgttatcaatctagtaaaatccttggagaaccaccttggacacctgaactcccccttgtagatcttccggtacagaaccatgatgttgtggtcatggaaagggaggtacccggccatgagcgcaaagaggatgacaccgcatgaccatatgtccgccttggcgccgtcgtatccgcggcgcctgagcacctcgggggcgacgtaggccggcgtgccgcagaacgtgtggagcagaccgtcggggtcgaactggtcggggccggcggcgaggccgaagtccgagaccttcaagtccccgttctcatccacgaggaggttctcgggcttgaggtcacggtggaacacgccgcgggcgtggcagaagtcgacggcggagacaagctgctggaagtagcgccgcgcggtgtcctccctgaggcgtcccttggagacgcgggagaagagctcgccgccgcggacatactccatgacgaagtagatcttggtcttgctggccattacctcgaacagctgcacgatgttcgggtggcgcacccggcggagcacgttgatctcgcgcttgacgaggtggaccatcccgcccttcacggccttctccttgtcgagcaccttgattgccacgcactcgtcggtctccaggtgcctcgcctggtacaccttcgcgaacgagccctgtcccaggacgcgccccagctcgtacttccccagcaccgtccccccgctaccaccaccgcctctcctcaccaacgccgccgccgccgatggcatcggggacgcccgcaccgcctgcggcgtcggctccctccgcgcaggcgagacggtcgccatcagcatcccaaagctagaaccccggggacacacgcacacacgactctctctctctctctctcccccctcctctgctctgtacca
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| CDS seq | atgctgatggcgaccgtctcgcctgcgcggagggagccgacgccgcaggcggtgcgggcgtccccgatgccatcggcggcggcggcgttggtgaggagaggcggtggtggtagcggggggacggtgctggggaagtacgagctggggcgcgtcctgggacagggctcgttcgcgaaggtgtaccaggcgaggcacctggagaccgacgagtgcgtggcaatcaaggtgctcgacaaggagaaggccgtgaagggcgggatggtccacctcgtcaagcgcgagatcaacgtgctccgccgggtgcgccacccgaacatcgtgcagctgttcgaggtaatggccagcaagaccaagatctacttcgtcatggagtatgtccgcggcggcgagctcttctcccgcgtctccaagggacgcctcagggaggacaccgcgcggcgctacttccagcagcttgtctccgccgtcgacttctgccacgcccgcggcgtgttccaccgtgacctcaagcccgagaacctcctcgtggatgagaacggggacttgaaggtctcggacttcggcctcgccgccggccccgaccagttcgaccccgacggtctgctccacacgttctgcggcacgccggcctacgtcgcccccgaggtgctcaggcgccgcggatacgacggcgccaaggcggacatatggtcatgcggtgtcatcctctttgcgctcatggccgggtacctccctttccatgaccacaacatcatggttctgtaccggaagatctacaagggggagttcaggtgtccaaggtggttctccaaggattttactagattgataacgcgccttcttgacgcaaaccccaaaactaggatcaccgtgccagagatcattgagagcgattggttcaagaaaggatacaagccagtcaagttttacattgaggatgacaagctctacaacctgtctgatgacgtgctgaacttggagcctgctgatcctgttcccccaccattgggtttggcacctcctgttcctccacctccacaaggggatgatcctgatggttcagggtctgagtcagattcatcagtcgtatcctgcccggccacattgtcaactggggagagccagagagtccgtgggtcactaccacgcccagcaagccttaatgcatttgatatcatatcattctcaaaaggattcaacttgtctgggctgtttgaggagagggggaacgagatcaggtttgtatctggtgagcccatgtctgacattgtaaaaaagctggaggagattgcaaaggtcaagagcttcacagtgcggaggaaggactggcgggtgagcatagagggtacacgcgaaggagttaaggggcctctaaccataggcgcggagatatttgagcttacaccctcccttgtagtagtggaagtaaaaagaaaggcaggtgataatgaagagtatgaggatttctgcaacatggagttgaagccaggaatgcagcaccttgtgcaccagatgctcccagctccaaatggaactcctgtgattgagaaggttgaaaggtcttcaagcttacaggctcccctcaccctgaagttgataggaacagaaggcagcatgagctag
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| Protein seq | MLMATVSPARREPTPQAVRASPMPSAAAALVRRGGGGSGGTVLGKYELGRVLGQGSFAKVYQARHLETDECVAIKVLDKEKAVKGGMVHLVKREINVLRRVRHPNIVQLFEVMASKTKIYFVMEYVRGGELFSRVSKGRLREDTARRYFQQLVSAVDFCHARGVFHRDLKPENLLVDENGDLKVSDFGLAAGPDQFDPDGLLHTFCGTPAYVAPEVLRRRGYDGAKADIWSCGVILFALMAGYLPFHDHNIMVLYRKIYKGEFRCPRWFSKDFTRLITRLLDANPKTRITVPEIIESDWFKKGYKPVKFYIEDDKLYNLSDDVLNLEPADPVPPPLGLAPPVPPPPQGDDPDGSGSESDSSVVSCPATLSTGESQRVRGSLPRPASLNAFDIISFSKGFNLSGLFEERGNEIRFVSGEPMSDIVKKLEEIAKVKSFTVRRKDWRVSIEGTREGVKGPLTIGAEIFELTPSLVVVEVKRKAGDNEEYEDFCNMELKPGMQHLVHQMLPAPNGTPVIEKVERSSSLQAPLTLKLIGTEGSMS |
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| Function | CBL-interacting protein kinase 12 [UniProtKB/Swiss-Prot:Q5JLS2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0034350 | OsCMeo_01g0034350.01 | Chr01 | 33007262 | 33012280 | - | NAM | ||
| CDS seq | atgctgatggcgaccgtctcgcctgcgcggagggagccgacgccgcaggcggtgcgggcgtccccgatgccatcggcggcggcggcgttggtgaggagaggcggtggtggtagcggggggacggtgctggggaagtacgagctggggcgcgtcctgggacagggctcgttcgcgaaggtgtaccaggcgaggcacctggagaccgacgagtgcgtggcaatcaaggtgctcgacaaggagaaggccgtgaagggcgggatggtccacctcgtcaagcgcgagatcaacgtgctccgccgggtgcgccacccgaacatcgtgcagctgttcgaggtaatggccagcaagaccaagatctacttcgtcatggagtatgtccgcggcggcgagctcttctcccgcgtctccaagggacgcctcagggaggacaccgcgcggcgctacttccagcagcttgtctccgccgtcgacttctgccacgcccgcggcgtgttccaccgtgacctcaagcccgagaacctcctcgtggatgagaacggggacttgaaggtctcggacttcggcctcgccgccggccccgaccagttcgaccccgacggtctgctccacacgttctgcggcacgccggcctacgtcgcccccgaggtgctcaggcgccgcggatacgacggcgccaaggcggacatatggtcatgcggtgtcatcctctttgcgctcatggccgggtacctccctttccatgaccacaacatcatggttctgtaccggaagatctacaagggggagttcaggtgtccaaggtggttctccaaggattttactagattgataacgcgccttcttgacgcaaaccccaaaactaggatcaccgtgccagagatcattgagagcgattggttcaagaaaggatacaagccagtcaagttttacattgaggatgacaagctctacaacctgtctgatgacgtgctgaacttggagcctgctgatcctgttcccccaccattgggtttggcacctcctgttcctccacctccacaaggggatgatcctgatggttcagggtctgagtcagattcatcagtcgtatcctgcccggccacattgtcaactggggagagccagagagtccgtgggtcactaccacgcccagcaagccttaatgcatttgatatcatatcattctcaaaaggattcaacttgtctgggctgtttgaggagagggggaacgagatcaggtttgtatctggtgagcccatgtctgacattgtaaaaaagctggaggagattgcaaaggtcaagagcttcacagtgcggaggaaggactggcgggtgagcatagagggtacacgcgaaggagttaaggggcctctaaccataggcgcggagatatttgagcttacaccctcccttgtagtagtggaagtaaaaagaaaggcaggtgataatgaagagtatgaggatttctgcaacatggagttgaagccaggaatgcagcaccttgtgcaccagatgctcccagctccaaatggaactcctgtgattgagaaggttgaaaggtcttcaagcttacaggctcccctcaccctgaagttgataggaacagaaggcagcatgagctag
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| Protein seq | MLMATVSPARREPTPQAVRASPMPSAAAALVRRGGGGSGGTVLGKYELGRVLGQGSFAKVYQARHLETDECVAIKVLDKEKAVKGGMVHLVKREINVLRRVRHPNIVQLFEVMASKTKIYFVMEYVRGGELFSRVSKGRLREDTARRYFQQLVSAVDFCHARGVFHRDLKPENLLVDENGDLKVSDFGLAAGPDQFDPDGLLHTFCGTPAYVAPEVLRRRGYDGAKADIWSCGVILFALMAGYLPFHDHNIMVLYRKIYKGEFRCPRWFSKDFTRLITRLLDANPKTRITVPEIIESDWFKKGYKPVKFYIEDDKLYNLSDDVLNLEPADPVPPPLGLAPPVPPPPQGDDPDGSGSESDSSVVSCPATLSTGESQRVRGSLPRPASLNAFDIISFSKGFNLSGLFEERGNEIRFVSGEPMSDIVKKLEEIAKVKSFTVRRKDWRVSIEGTREGVKGPLTIGAEIFELTPSLVVVEVKRKAGDNEEYEDFCNMELKPGMQHLVHQMLPAPNGTPVIEKVERSSSLQAPLTLKLIGTEGSMS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.569886 | 1.306952 | 0.447227 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0759400 | RBH | 1.938430 | 1.551795 | 1.679019 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g55450 | RBH | 1.310429 | 1.043525 | 0.432068 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0759400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0034390 | RBH | 0.095865 | 2.648359 | 0.427651 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0033910 | RBH | 0.043313 | 1.061323 | 0.215132 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0023320 | RBH | 4.646768 | 14.779338 | 11.319209 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0033640 | RBH | 0.095299 | 0.094828 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0033390 | RBH | 4.750738 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0530900 | RBH | 0.3740485 | 0.838191 | 3.1012375 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0033120 | RBH | 0.000000 | 0.054079 | 0.249316 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0526200 | RBH | 0.821675 | 0.886042 | 4.31974 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0033300 | RBH | 0.167496 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0033360 | RBH | 0.403922 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0033600 | RBH | 7.996419 | 2.128884 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0033640 | RBH | 0.372340 | 0.0 | 0.077590 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0033480 | RBH | 0.000000 | 0.459782 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G033940 | RBH | 0.339807 | 1.626619 | 0.120123 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0033600 | RBH | 0.401538 | 3.973379 | 0.0 |
