Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0033670 | OGI:01095010 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:32487991-32491702 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAACATAACATGAAACTTTCAGTCAACTTGTAGCATGTCAGAATCTTTAGTACATATATTCAGGGCGGGAAGGAGAAGACGAATCATTCCAGCTTCCAAACAAATCTCATCTTTGATGTTTATTAACCTGGGTGGTTAGTGAAGGTAGGTACAATTTACAAACTTCCACTCCAACAAAAATTGCATGAATTCTAAAACCAAAGAAACAACCGCGGGATTTGGAATGTAGTTTAATTTACAGTGACAGCATTACGTGTATATATACACGAACAAAATGATTTAATTCATTCGATCGCAACCTTGACGATCACGTACGGCTAACAGTCGCCGGGCTCGCCGGGCGGGGCACCGAAATTCCGGTGTCGCACTGTCACACCCGCCCGCCACGTCTAGCGGTGGTCCGCCTGCTCAGCCTCTCCGTGCCGGCCGCCTCGCCGCTGGCGCCGGCCGTCATCTGCACGTCCACCGTCACCTCCCCGGTGTCGCCGCCGGCTGCGCTGGTGGTGTACTCGGTGGACGGGTTCAGCCCGTACTCGCTAGTTGGCTCGCTGAACTCGCTGCTCGTGTACTCGCTGACGGTGCCCGTACCGGTGGCCGAGCCGAACGCCATCTTCCTGAGCCGCTTCATCTGGTCCGTCGTGCCGCCGCTCGTCCGCTGCATCGCGCTCTGCCCGGGCGTCACGCCAGCGTTCAGGTCCTCCGCCGCCAGCTCGCCCTCCAGGTAACGCACGATCTGACCATTCGAGTGTCCACATTTTCAGTGTACAAGCTACGGAGTTGCTGAAACCAGAAGCCGTGCGGTGTGTGCTGTGTGTTTGTGTTTGTTCAGTGAAGGTGTGAGGAGTTTTGGCAAGAACCTGGCTCATCCGCGGGCGAGACCGCGCGGTGTGGCGCACGGCGGCGGCCGCGCAGGCGATCAGCCGCCCCATGTCGTACGCGTCGTAGTTGTTCTCCAGCCTCGGGTCAACCAGCTCCTCGAAGTTCTCCTCCTCCACAGCTCTCACCAGCAGGGGTCTCGCCTGTTGGACACACACAGAGATGACTACTTTCACCGGCCGTGGCAAATGGAAATCTACGTGTTCGGTTCAAGACTCGGAAGCCCACTCACCCAAGAAACCAATGTGTCAGGCTGGTCACCGTGAGACACCATGATAGGCTTCTTCCCGGTGATCAGCTCCAGGAGCATCACGCCGAATGAGAAGACGTCGGAACGGTCGTTCACTTTGCCCGTGGCAGCATACTCTGGAGCTAAATATCTGGAGATACAAGTTGTTGACAGCACAAAGTTTAGTCCGCGTGGTGCGTGCACTGAGGAACTTTTGACGTACGAGTGCAAGTGTAATTGATTGTTGTGGTTGTGATGGTGATGTGTTTACCCAAAAGTTCCCATTACGCGCGTCGAAACAGCGGTCTGCTCAGTGGCTTGGTACTTGGCCAACCCAAAATCTGCAACCTGTACAAACATGTGTGCACCTTCGCGATAAATACGCGTATAACGTCAATTATTGCAGGTTCCAAATTTTCGCGATTTACCTTTGGTTCGAAGGTGTAGTCCAGCAGGATGTTGGCTGCCTTGATGTCTCTATGAATAATCTTAGGATGACCTGACAACAGTCAAAGCATGCCATCTTATCAGAACCACAGTTTCACAGATTCCGCATATATTTATGTGGTGTTTGGGAAGAAAGGACTAAACTTTAATCCTTTTAACAAAAGTACAAGTCTCTCTCATAAGGACTTATGTTTTTGCTAGAGATTCCCAAACACCACCTTAGATTTCAGAGGAAACACAAGGTGGAACTCACAGTCCTCGTGCAGATACGCGAGGCCCTTGGCCGAGCCGACCGCGATCTTCCACCGCCGCGGCCAGTCCAGCGCCGGCCGGCCGCTACCTGCAGAAACCAACCACTCGTGTCAGCCCAAGCAAGCCCCAGCATTACACGCAACAATGGTACATCATCCGGCAGCAAGTACTTACCGTGCAGGTGGAACTCGAGCGTCTTGTTGGGGACGTACTCGTAGACGAGAAGGCGCTGCTCGCCGTAGATGCAGTAGCCGACGAGGGAGACGAGGTTCTTGTGGTGCACGCGGCTGATGATCTCCACCTCGGCCTGGAACTCGCGCTCGCCCTGCCCGCTGCCGGACCGCAGCTTCTTGATGGCCACCTCTTGCCCGCGCACCGTCCCCTTGTACACCTGCCCGAACCCGCCCTGCCCGAGCAGGTTCGATTCCGAGAACCCGTCCGCTGCCGCCGCCAGCTCGTCGTACCCGAACGCGCCGCCCATCATCGCGATCCCCGGCACCGCCGACGCCGCCTCGGACGCCCCGCCGCTGCTCACGAACGAGTGCGGCTGCAGCAGCAGCGGCGGCGTCGACGAGGGGCTCGGCGACAGCGCGTGTGACTGCTGCTGCGACGGCGGCCGGTGCGGGTCGTAGAATTCGGCTGCAGGTGGCACGGCAACAAAACAGGGAAAAAAAAACATTCGATCAGCTCAACTCAATCGCCGCGCACAGATCGATGCATCCCTGGAGAAAATTTTCACGAGCATAGCATACAAAATGGTCAAACGCTAACGAGTGTGCGCCGCGAAGACCGCGGACACGAGCCAGACGAGATGGAATACGTCGCACTGTACGCGATGCCGATGTGTCGCTATCACCACCATCGGTCACCCGCGACGACCGCAGCGAAGGGCGTGGATGGGATCGCGCTAACACCGAAAAAGGCTTGGGGGACCCCGCGTCGCGCATTGTCGCGTCGACGTGGCCGCGACGTAGCATGATCTCGCGCGACCAACACTGCCAATGAAAGGAGGGGAATACGCGCTTACGTACCTGGGAAGGGTGGGTAGCCCGGGTGGTGCGGCGGCGGCGGGTGTTGGCGGCGCCGGCGCCTCTTGCTAACGAAGAAGTAGATCAGACCGGCGGCGAGGCCGAGCACGACCACCGCCGCGACGGCCACGCCGACGGCCACCACGGTCCCGTTGTTGGAGGACTTGGAGCCGGAGGAGACACCCGACTGCGTCGGCGTCGAGGGCGGTGGTGGTGGGGATAAAGAAATTCGCGGTGGCGGTGGTGAGGCTGGGACGTTGCTGGGGGACGGTGGCGGAGACGGGGGGTTGTTACTCGGTGGCGGGGCGGTTGGGACATCGGGCGGCGGCGGGCTTGCGACAGGCGGAGGAGGGGATGGCGTCACCGGAGGAGGTGGGGACGGCGTCACCGGCGTTGGGGTCGGCGTCGGTGGAGGCGGTGACGGTGGCACTGGTGGAGGAGCCACCGGTGTAGGAGGAGTCACCGGCGGGGGGCTCACCGGGGGAGGTGTAACAGGTGGGGGGCTCACCGGGGGAGGTGTCACAGGTGGGGGACTCACCGGAGGAGGTGACACCGGCGGGGGAGTCACCGGTGGTGGCGTCACCGGAGGGGGTGAGACCGGCGGGGGAGCAGTCACCGGAGGAGGCGTCACGGGTGGCGTCTGCGGCGGTGGAGCCGCCGGCGTGACCGGCGCCGACGGCGCCTGAGATGACATGGTGGCACGCGGCGCAGGTGCAACGTTAGGCTCTCGGTATGATTCAACGACCACGACCAAATACCAATGGGCTAGCTAATTAGGAAGACTACGTGCAAGATATCTATGAGCTGGTTGCAGTTCACCACGAGGTGGTTTCCATTTTGGCCGTGTAACAATTCTTCGGCTTTGCTTGCTTGCTCGCCT
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| CDS seq | ATGTCATCTCAGGCGCCGTCGGCGCCGGTCACGCCGGCGGCTCCACCGCCGCAGACGCCACCCGTGACGCCTCCTCCGGTGACTGCTCCCCCGCCGGTCTCACCCCCTCCGGTGACGCCACCACCGGTGACTCCCCCGCCGGTGTCACCTCCTCCGGTGAGTCCCCCACCTGTGACACCTCCCCCGGTGAGCCCCCCACCTGTTACACCTCCCCCGGTGAGCCCCCCGCCGGTGACTCCTCCTACACCGGTGGCTCCTCCACCAGTGCCACCGTCACCGCCTCCACCGACGCCGACCCCAACGCCGGTGACGCCGTCCCCACCTCCTCCGGTGACGCCATCCCCTCCTCCGCCTGTCGCAAGCCCGCCGCCGCCCGATGTCCCAACCGCCCCGCCACCGAGTAACAACCCCCCGTCTCCGCCACCGTCCCCCAGCAACGTCCCAGCCTCACCACCGCCACCGCGAATTTCTTTATCCCCACCACCACCGCCCTCGACGCCGACGCAGTCGGGTGTCTCCTCCGGCTCCAAGTCCTCCAACAACGGGACCGTGGTGGCCGTCGGCGTGGCCGTCGCGGCGGTGGTCGTGCTCGGCCTCGCCGCCGGTCTGATCTACTTCTTCGTTAGCAAGAGGCGCCGGCGCCGCCAACACCCGCCGCCGCCGCACCACCCGGGCTACCCACCCTTCCCAGCCGAATTCTACGACCCGCACCGGCCGCCGTCGCAGCAGCAGTCACACGCGCTGTCGCCGAGCCCCTCGTCGACGCCGCCGCTGCTGCTGCAGCCGCACTCGTTCGTGAGCAGCGGCGGGGCGTCCGAGGCGGCGTCGGCGGTGCCGGGGATCGCGATGATGGGCGGCGCGTTCGGGTACGACGAGCTGGCGGCGGCAGCGGACGGGTTCTCGGAATCGAACCTGCTCGGGCAGGGCGGGTTCGGGCAGGTGTACAAGGGGACGGTGCGCGGGCAAGAGGTGGCCATCAAGAAGCTGCGGTCCGGCAGCGGGCAGGGCGAGCGCGAGTTCCAGGCCGAGGTGGAGATCATCAGCCGCGTGCACCACAAGAACCTCGTCTCCCTCGTCGGCTACTGCATCTACGGCGAGCAGCGCCTTCTCGTCTACGAGTACGTCCCCAACAAGACGCTCGAGTTCCACCTGCACGGTAGCGGCCGGCCGGCGCTGGACTGGCCGCGGCGGTGGAAGATCGCGGCAGCCAACATCCTGCTGGACTACACCTTCGAACCAAAGGTTGCAGATTTTGGGTTGGCCAAGTACCAAGCCACTGAGCAGACCGCTGTTTCGACGCGCGTAATGGGAACTTTTGGATATTTAGCTCCAGAGTATGCTGCCACGGGCAAAGTGAACGACCGTTCCGACGTCTTCTCATTCGGCGTGATGCTCCTGGAGCTGATCACCGGGAAGAAGCCTATCATGGTGTCTCACGGTGACCAGCCTGACACATTGGTTTCTTGGGCGAGACCCCTGCTGGTGAGAGCTGTGGAGGAGGAGAACTTCGAGGAGCTGGTTGACCCGAGGCTGGAGAACAACTACGACGCGTACGACATGGGGCGGCTGATCGCCTGCGCGGCCGCCGCCGTGCGCCACACCGCGCGGTCTCGCCCGCGGATGAGCCAGATCGTGCGTTACCTGGAGGGCGAGCTGGCGGCGGAGGACCTGAACGCTGGCGTGACGCCCGGGCAGAGCGCGATGCAGCGGACGAGCGGCGGCACGACGGACCAGATGAAGCGGCTCAGGAAGATGGCGTTCGGCTCGGCCACCGGTACGGGCACCGTCAGCGAGTACACGAGCAGCGAGTTCAGCGAGCCAACTAGCGAGTACGGGCTGAACCCGTCCACCGAGTACACCACCAGCGCAGCCGGCGGCGACACCGGGGAGGTGACGGTGGACGTGCAGATGACGGCCGGCGCCAGCGGCGAGGCGGCCGGCACGGAGAGGCTGAGCAGGCGGACCACCGCTAGACGTGGCGGGCGGGTGTGA
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| Protein seq | MSSQAPSAPVTPAAPPPQTPPVTPPPVTAPPPVSPPPVTPPPVTPPPVSPPPVSPPPVTPPPVSPPPVTPPPVSPPPVTPPTPVAPPPVPPSPPPPTPTPTPVTPSPPPPVTPSPPPPVASPPPPDVPTAPPPSNNPPSPPPSPSNVPASPPPPRISLSPPPPPSTPTQSGVSSGSKSSNNGTVVAVGVAVAAVVVLGLAAGLIYFFVSKRRRRRQHPPPPHHPGYPPFPAEFYDPHRPPSQQQSHALSPSPSSTPPLLLQPHSFVSSGGASEAASAVPGIAMMGGAFGYDELAAAADGFSESNLLGQGGFGQVYKGTVRGQEVAIKKLRSGSGQGEREFQAEVEIISRVHHKNLVSLVGYCIYGEQRLLVYEYVPNKTLEFHLHGSGRPALDWPRRWKIAAANILLDYTFEPKVADFGLAKYQATEQTAVSTRVMGTFGYLAPEYAATGKVNDRSDVFSFGVMLLELITGKKPIMVSHGDQPDTLVSWARPLLVRAVEEENFEELVDPRLENNYDAYDMGRLIACAAAAVRHTARSRPRMSQIVRYLEGELAAEDLNAGVTPGQSAMQRTSGGTTDQMKRLRKMAFGSATGTGTVSEYTSSEFSEPTSEYGLNPSTEYTTSAAGGDTGEVTVDVQMTAGASGEAAGTERLSRRTTARRGGRV |
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| Function | Proline-rich receptor-like protein kinase PERK5 [UniProtKB/Swiss-Prot:Q8GX23] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0033670 | OsCMeo_01g0033670.01 | Chr01 | 32487991 | 32491702 | - | NAM | ||
| CDS seq | ATGTCATCTCAGGCGCCGTCGGCGCCGGTCACGCCGGCGGCTCCACCGCCGCAGACGCCACCCGTGACGCCTCCTCCGGTGACTGCTCCCCCGCCGGTCTCACCCCCTCCGGTGACGCCACCACCGGTGACTCCCCCGCCGGTGTCACCTCCTCCGGTGAGTCCCCCACCTGTGACACCTCCCCCGGTGAGCCCCCCACCTGTTACACCTCCCCCGGTGAGCCCCCCGCCGGTGACTCCTCCTACACCGGTGGCTCCTCCACCAGTGCCACCGTCACCGCCTCCACCGACGCCGACCCCAACGCCGGTGACGCCGTCCCCACCTCCTCCGGTGACGCCATCCCCTCCTCCGCCTGTCGCAAGCCCGCCGCCGCCCGATGTCCCAACCGCCCCGCCACCGAGTAACAACCCCCCGTCTCCGCCACCGTCCCCCAGCAACGTCCCAGCCTCACCACCGCCACCGCGAATTTCTTTATCCCCACCACCACCGCCCTCGACGCCGACGCAGTCGGGTGTCTCCTCCGGCTCCAAGTCCTCCAACAACGGGACCGTGGTGGCCGTCGGCGTGGCCGTCGCGGCGGTGGTCGTGCTCGGCCTCGCCGCCGGTCTGATCTACTTCTTCGTTAGCAAGAGGCGCCGGCGCCGCCAACACCCGCCGCCGCCGCACCACCCGGGCTACCCACCCTTCCCAGCCGAATTCTACGACCCGCACCGGCCGCCGTCGCAGCAGCAGTCACACGCGCTGTCGCCGAGCCCCTCGTCGACGCCGCCGCTGCTGCTGCAGCCGCACTCGTTCGTGAGCAGCGGCGGGGCGTCCGAGGCGGCGTCGGCGGTGCCGGGGATCGCGATGATGGGCGGCGCGTTCGGGTACGACGAGCTGGCGGCGGCAGCGGACGGGTTCTCGGAATCGAACCTGCTCGGGCAGGGCGGGTTCGGGCAGGTGTACAAGGGGACGGTGCGCGGGCAAGAGGTGGCCATCAAGAAGCTGCGGTCCGGCAGCGGGCAGGGCGAGCGCGAGTTCCAGGCCGAGGTGGAGATCATCAGCCGCGTGCACCACAAGAACCTCGTCTCCCTCGTCGGCTACTGCATCTACGGCGAGCAGCGCCTTCTCGTCTACGAGTACGTCCCCAACAAGACGCTCGAGTTCCACCTGCACGGTAGCGGCCGGCCGGCGCTGGACTGGCCGCGGCGGTGGAAGATCGCGGCAGCCAACATCCTGCTGGACTACACCTTCGAACCAAAGGTTGCAGATTTTGGGTTGGCCAAGTACCAAGCCACTGAGCAGACCGCTGTTTCGACGCGCGTAATGGGAACTTTTGGATATTTAGCTCCAGAGTATGCTGCCACGGGCAAAGTGAACGACCGTTCCGACGTCTTCTCATTCGGCGTGATGCTCCTGGAGCTGATCACCGGGAAGAAGCCTATCATGGTGTCTCACGGTGACCAGCCTGACACATTGGTTTCTTGGGCGAGACCCCTGCTGGTGAGAGCTGTGGAGGAGGAGAACTTCGAGGAGCTGGTTGACCCGAGGCTGGAGAACAACTACGACGCGTACGACATGGGGCGGCTGATCGCCTGCGCGGCCGCCGCCGTGCGCCACACCGCGCGGTCTCGCCCGCGGATGAGCCAGATCGTGCGTTACCTGGAGGGCGAGCTGGCGGCGGAGGACCTGAACGCTGGCGTGACGCCCGGGCAGAGCGCGATGCAGCGGACGAGCGGCGGCACGACGGACCAGATGAAGCGGCTCAGGAAGATGGCGTTCGGCTCGGCCACCGGTACGGGCACCGTCAGCGAGTACACGAGCAGCGAGTTCAGCGAGCCAACTAGCGAGTACGGGCTGAACCCGTCCACCGAGTACACCACCAGCGCAGCCGGCGGCGACACCGGGGAGGTGACGGTGGACGTGCAGATGACGGCCGGCGCCAGCGGCGAGGCGGCCGGCACGGAGAGGCTGAGCAGGCGGACCACCGCTAGACGTGGCGGGCGGGTGTGA
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| Protein seq | MSSQAPSAPVTPAAPPPQTPPVTPPPVTAPPPVSPPPVTPPPVTPPPVSPPPVSPPPVTPPPVSPPPVTPPPVSPPPVTPPTPVAPPPVPPSPPPPTPTPTPVTPSPPPPVTPSPPPPVASPPPPDVPTAPPPSNNPPSPPPSPSNVPASPPPPRISLSPPPPPSTPTQSGVSSGSKSSNNGTVVAVGVAVAAVVVLGLAAGLIYFFVSKRRRRRQHPPPPHHPGYPPFPAEFYDPHRPPSQQQSHALSPSPSSTPPLLLQPHSFVSSGGASEAASAVPGIAMMGGAFGYDELAAAADGFSESNLLGQGGFGQVYKGTVRGQEVAIKKLRSGSGQGEREFQAEVEIISRVHHKNLVSLVGYCIYGEQRLLVYEYVPNKTLEFHLHGSGRPALDWPRRWKIAAANILLDYTFEPKVADFGLAKYQATEQTAVSTRVMGTFGYLAPEYAATGKVNDRSDVFSFGVMLLELITGKKPIMVSHGDQPDTLVSWARPLLVRAVEEENFEELVDPRLENNYDAYDMGRLIACAAAAVRHTARSRPRMSQIVRYLEGELAAEDLNAGVTPGQSAMQRTSGGTTDQMKRLRKMAFGSATGTGTVSEYTSSEFSEPTSEYGLNPSTEYTTSAAGGDTGEVTVDVQMTAGASGEAAGTERLSRRTTARRGGRV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 12.134007 | 0.629151 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0750600 | RBH | 0.099041 | 0.333419 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g54700 | RBH | 0.191438 | 0.203631 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0750600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0033710 | RBH | 0.023346 | 9.851650 | 0.431467 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0033230 | RBH | 0.0 | 6.624235 | 0.506110 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0023470 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0032930 | RBH | 0.089179 | 0.794061 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0032710 | RBH | 0.0 | 16.541281 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0522600 | RBH | 1.0971835 | 37.838682 | 0.732538 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0032420 | RBH | 0.075946 | 1.655834 | 0.096418 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0517600 | RBH | 1.0394315 | 28.6028985 | 0.266725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0032600 | RBH | 0.064812 | 0.095376 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0032660 | RBH | 0.000000 | 24.247034 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0032910 | RBH | 1.081600 | 8.591704 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0033000 | RBH | 0.127473 | 1.143346 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0032790 | RBH | 0.000000 | 6.996683 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G033260 | RBH | 0.000000 | 4.763686 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0032870 | RBH | 0.000000 | 15.069619 | 0.288999 |
