Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0026940 | OGI:01079770 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:27025962-27031500 | ||||||||
| Gene Symbol | OsMPK16, MPK16 | ||||||||||
| DNA seq | agactgggaaatagacaagattaatgagttaattcatgcatatgttgatacattgttatcactagttacatgatctaatcagtgactaagtctcctatgctcggctaagaataaagtatagggtgacagtgaaatccatcgactaaaatcaggagctgaagtcaaatatatcttagctcctcgaaaaaatcaggggagagatttcaacacaacatggatcccaacaaggagccgagaaaaactgtggctacttaaatatctaattcatttatctgcccttcttaagtttagactatatctacgtgctgctatatggattgatcacctgtacagtaagagatacttatgttttcaattgagcaatcttatgcggcaccccatcagctgcttcattcatatattctgacatagattcttcctgcatacatcagggaaaaaagctgaagttagaacatttgttaccgcatcaggggagaaattaagaaattaacacgagttataaatatgaaactccgaaggatttgaaagtgctgatggatgatggataaaagtgagtttatgacaattattcgagggcagaaatgaatgaattaaaaattaaaaggttgataagttgattttagaaaggtctcttaagaaatgttgataaagaaagtttttgcaaacatcatactgtttaggagtttgggaagccatgataatccggtggccataatcataaaagacacctaaacattcagtgaatctagaagcatttttctgaaagttaggagccactaggccattgggatggtaaattggctccactgaacaaacaatttgttctaagcaaggcagccaacaaaaactgtgcaaattcatgaaggaaagttttgatgtaatgagcatgggattctgtaagttttaacagagtcggctataaagttctacatgggtatctgcttttataaccttcaactgcacttcagacaggcacattccttttataaccttgtgatttaaaaagtggtacataatcaaaccttttgacttagtaactgacaatgtacataattatgcttacgattatttgctgcatgaaatcacttacatctttttctcgcttttcttttatgacaacacactgggaagcaccgatgctttcgctcttcaggaagttacgagcacttaagagtggcttgttcagtccatctgtcactgatgagtgccccggttgctcacctacatgcaactttatgcagtaatctgcagttggatcaggttcatcaccattcctaacaactctttccctgaaacgatatgtgaaacaaattagatcaagagaaaaaagactgaaagatggaaaaggccgggaatgtaaaccattttcactatctataaaaattgtattattgaaggcagtgaattttagttgatgtctcaacaagggaagcactcttaatactcccctttgttgccatagtgcttaatgacattaatatataacgtcaaaagtgtttgtgtttgatccacctcataggcatgcagactacgtcttgttcatatagaaaagtataaaccaatgaactgtggaatttcactttagtgaaatggggcacgataggttttttctacttcagaaaagaaaattgtcttcagtagaaatatgagacagaactattgccttggtaaagaaacatgctgccttagctgcgggctagtcttgtcaccctgagcaacaccttcttctagatgagcaaattgcctcttaaaacgatccaccccactgtcaacagcatagccatcagtttatttgcaacatgtccacaatcaatagtgtgtgtgaatgaaaaaatgaagtatgataagtcacgattgattgcagtgtgtatcactatgattaaaatgaataaatgaactgcatacagtttacaaagatagtggaaactgttggtaacattatatagtgcatccgacctggggtacaaaaagtttgactgatccccaccacgaagatatttctgcatcatctgaggatggtactctaatatctaaagatagagagagagagagacaccatgcataagaaaagactattaccaaaatcctcatggtagaaaagattagcagtacctctctgtaaattaattcccggacatcatcttttgctagcttccttctctcaaactcaaactcgagttttgagatgggttgtgctatgggttcacgttccgaatttgccaatccagtaaagtatggatctgttaaggccttgacacataactataatatcagtatcagggataacgaatattagaataacatttttgagcaattgctctatgctggctagtagctacattcctacctctgcagcagttggccgatccttgggatcaaaagcaagtaaccgttcaagcaaatggagagccattgggtctgcaccaggaaatttctgagaaaaaggcactcgaggcttttttctcatgttgcccaaatatcgtcgagctttctcattccgaatctacaaatagtatcaaaatttgaagtataatttctaaaggtacttcttcaattgtaaaactgattgttggaagaaaacagtggacacataatgtgttctattgactttattcggtcaatgttttagaactttgaccatcaacagctctcaaaatatttagtttgaaaacataaaaatcatatgggtagatttttctttataagtacgtttaacaatattataattttgttagatattatcattacattctaatagagaaatagtggtcaaaggacctatagagggagcttttagcaaccgcagtttctccaagaattaagagctccctaaacagtctagattgccactcagattctaagaatctgtagttgtagaattcaaaaaatgaattagaagccttaagctgggtttagcagcttccccagattctcagaagctggctaccaaccagtaaattcttagaatcttaagctcccccaaacatggccttttgaacaccaaataccgaataaagtcaacaatgtcatatatttaaatatagaggttgtatccccatcatcgaactcatcctacaattaattgatagactgattaatattaaaaatcaaggctaatgtattcaaaatgtaaatgcaatataaatttcggatttgttcttccaagcttcatcttcaccatttgtgttcttgaaaatagatatgtagttttggagagcttaacatcaaccctgagccagttttctagtataatctccaaataaactgaagcagtggaaaaaggcttataagctaaagcctcaaatgaacttaagtattggagaagccaaccatggacaaacatgccttaaaatattgaagataattcattataaactaagtaaacgcttcacatcgaatttacagtggttggtttacatttatactttatataaaggtagatgtttcaccttatgagtatttcaatattgataggggtgcagatagtttgtgtataataacaccagtacaagaaaactccatcactacattatcctagagacaagagccaagccattctcagcatttttgaaactacttatgcagcctgagtataactaagttatttccaataaatatgtgatgagtgaactgtttgatgtgtctcacgaacttcatgtgttccatacagcgcgagtagaaagtttctaggaccacagacagattcacctatgaactaattggctaaaacattgttcagaattctctacacagcttgcattgaagtaatcatcttttaggctgtcatgatagaaagtaattttgctgatatttatataaattgtaggtttaaatataacagaaatgcccgcagcccgctaatttgaacctcctaaaaatgtctgggtataagaaatgataatgaccaacagtaggaaaaaggttaaatgaaattgcatagaagacaggctccaactaattgcagatttgcagggagactgggaaagtgaaccccaccctggaaatagtttctcctgaaggagagccaagtaagtcggtcatgagatccaattgatgtaccacattctttccaggaaaaagtggctttcccataagcatttcagcaaatatacaaccgacgctccaaatatcaattgcaggagtgtactgcaaaaaacacatttgagtttagtatggtgcaagtgcatttgaaattatccaaattggtatgctaagcatatgtatcgatagttcaagagcatggcattattttgtaacataaaggatttaatgtacggcattaactcaataatctcggatggggataaagtagctctgaaacgaaatgaccaggttgtgtaaaattgagcagaaaattcaggctttagcatgacgaaaatttgcagacctttgaaaagaaagagccgcacaactctggagcgcgataccatcttgttgccacgtaatcctacgacaaaaggaccacaaaacgaattaaaattcaaactatgatgggtgcttaagggctaacacaattctcaacatatctgactgtactagtactaggattgttcttttaccgtccagaatatcgcggacggagtgtcgtcgaaggacactcgagcaaggccgaagtcacaaatcttgaccttgcaatcagcattggcaagaatgttcttgggcttgaggtcccggtggaagacgctggcggcatgaatgtacttcatcccacgaagcagctggtagaggaagaactggtggtgctcgggggtgaggtcgtcgttggccttgatgacctggtggagatcggactccatgagttcgaagataatgtaaatgtcgcgaaactcgcggcgggagggtgggagcatgatgtgcttgatctcgacgatgtccgggtggcgcaggaggcggagtagcttgatctcgcggaggatgcgggtggcgtcggagatgtgctcgaagacgtcgttgatcttcttgatggcgacgcgcccgccggtgtgagtgtcgacggcggcggccaccacgccgtagctgcccttgccgaccacctcggtgacctcgtaccggctcgcatcgccgtactcgctgaagaactccggctcccccgagccctgtgcgcgcacgacggagcgaaccgatcagacccgcgtcccgaacaaccacaaaatcgcagcgatttggggggcacggtggggtcctaagcccgcgcaccttcttagcatccatggcgccgagcgcccgaccctgttgcgcccccgtgtgcccctccgtggccgcgctccccctccgaatcccgctcctcccgccgcctccgctctctggtgctgcgccgctgcctgtagtggcggttggggatgcggataaggcgagggggcagaggggaggtgcgatgggagcgggcatgaggagccatatgcgtcgtggcgggcgaaccggcgaagggagcggcggaacgggagcgcgcgctggcagtggacgcccgatcaccgcgggcgcgcagggcgcgggcgaagggggagaagggaagccgaaggtcccatggcgtgggtgtgct
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| CDS seq | atgcccgctcccatcgcacctcccctctgccccctcgccttatccgcatccccaaccgccactacaggcagcggcgcagcaccagagagcggaggcggcgggaggagcgggattcggagggggagcgcggccacggaggggcacacgggggcgcaacagggtcgggcgctcggcgccatggatgctaagaagggctcgggggagccggagttcttcagcgagtacggcgatgcgagccggtacgaggtcaccgaggtggtcggcaagggcagctacggcgtggtggccgccgccgtcgacactcacaccggcgggcgcgtcgccatcaagaagatcaacgacgtcttcgagcacatctccgacgccacccgcatcctccgcgagatcaagctactccgcctcctgcgccacccggacatcgtcgagatcaagcacatcatgctcccaccctcccgccgcgagtttcgcgacatttacattatcttcgaactcatggagtccgatctccaccaggtcatcaaggccaacgacgacctcacccccgagcaccaccagttcttcctctaccagctgcttcgtgggatgaagtacattcatgccgccagcgtcttccaccgggacctcaagcccaagaacattcttgccaatgctgattgcaaggtcaagatttgtgacttcggccttgctcgagtgtccttcgacgacactccgtccgcgatattctggacggattacgtggcaacaagatggtatcgcgctccagagttgtgcggctctttcttttcaaagtacactcctgcaattgatatttggagcgtcggttgtatatttgctgaaatgcttatgggaaagccactttttcctggaaagaatgtggtacatcaattggatctcatgaccgacttacttggctctccttcaggagaaactatttccaggattcggaatgagaaagctcgacgatatttgggcaacatgagaaaaaagcctcgagtgcctttttctcagaaatttcctggtgcagacccaatggctctccatttgcttgaacggttacttgcttttgatcccaaggatcggccaactgctgcagagttatgtgtcaaggccttaacagatccatactttactggattggcaaattcggaacgtgaacccatagcacaacccatctcaaaactcgagtttgagtttgagagaaggaagctagcaaaagatgatgtccgggaattaatttacagagagatattagagtaccatcctcagatgatgcagaaatatcttcgtggtggggatcagtcaaactttttgtaccccagtggggtggatcgttttaagaggcaatttgctcatctagaagaaggtgttgctcagggtgacaagactagcccgcagctaaggcagcatgtttctttaccaagggaaagagttgttaggaatggtgatgaacctgatccaactgcagattactgcataaagttgcatgtaggtgagcaaccggggcactcatcagtgacagatggactgaacaagccactcttaagtgctcgtaacttcctgaagagcgaaagcatcggtgcttcccagtgtgttgtcataaaagaaaagcgagaaaaagatgaagaatctatgtcagaatatatgaatgaagcagctgatggggtgccgcataagattgctcaattgaaaacataa
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| Protein seq | MPAPIAPPLCPLALSASPTATTGSGAAPESGGGGRSGIRRGSAATEGHTGAQQGRALGAMDAKKGSGEPEFFSEYGDASRYEVTEVVGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNILANADCKVKICDFGLARVSFDDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLMGKPLFPGKNVVHQLDLMTDLLGSPSGETISRIRNEKARRYLGNMRKKPRVPFSQKFPGADPMALHLLERLLAFDPKDRPTAAELCVKALTDPYFTGLANSEREPIAQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMMQKYLRGGDQSNFLYPSGVDRFKRQFAHLEEGVAQGDKTSPQLRQHVSLPRERVVRNGDEPDPTADYCIKLHVGEQPGHSSVTDGLNKPLLSARNFLKSESIGASQCVVIKEKREKDEESMSEYMNEAADGVPHKIAQLKT |
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| Function | Mitogen-activated protein kinase 16 [UniProtKB/Swiss-Prot:Q5VP69] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0026940 | OsCMeo_01g0026940.01 | Chr01 | 27025987 | 27031349 | - | NAM | ||
| CDS seq | atgcccgctcccatcgcacctcccctctgccccctcgccttatccgcatccccaaccgccactacaggcagcggcgcagcaccagagagcggaggcggcgggaggagcgggattcggagggggagcgcggccacggaggggcacacgggggcgcaacagggtcgggcgctcggcgccatggatgctaagaagggctcgggggagccggagttcttcagcgagtacggcgatgcgagccggtacgaggtcaccgaggtggtcggcaagggcagctacggcgtggtggccgccgccgtcgacactcacaccggcgggcgcgtcgccatcaagaagatcaacgacgtcttcgagcacatctccgacgccacccgcatcctccgcgagatcaagctactccgcctcctgcgccacccggacatcgtcgagatcaagcacatcatgctcccaccctcccgccgcgagtttcgcgacatttacattatcttcgaactcatggagtccgatctccaccaggtcatcaaggccaacgacgacctcacccccgagcaccaccagttcttcctctaccagctgcttcgtgggatgaagtacattcatgccgccagcgtcttccaccgggacctcaagcccaagaacattcttgccaatgctgattgcaaggtcaagatttgtgacttcggccttgctcgagtgtccttcgacgacactccgtccgcgatattctggacggattacgtggcaacaagatggtatcgcgctccagagttgtgcggctctttcttttcaaagtacactcctgcaattgatatttggagcgtcggttgtatatttgctgaaatgcttatgggaaagccactttttcctggaaagaatgtggtacatcaattggatctcatgaccgacttacttggctctccttcaggagaaactatttccaggattcggaatgagaaagctcgacgatatttgggcaacatgagaaaaaagcctcgagtgcctttttctcagaaatttcctggtgcagacccaatggctctccatttgcttgaacggttacttgcttttgatcccaaggatcggccaactgctgcagagttatgtgtcaaggccttaacagatccatactttactggattggcaaattcggaacgtgaacccatagcacaacccatctcaaaactcgagtttgagtttgagagaaggaagctagcaaaagatgatgtccgggaattaatttacagagagatattagagtaccatcctcagatgatgcagaaatatcttcgtggtggggatcagtcaaactttttgtaccccagtggggtggatcgttttaagaggcaatttgctcatctagaagaaggtgttgctcagggtgacaagactagcccgcagctaaggcagcatgtttctttaccaagggaaagagttgttaggaatggtgatgaacctgatccaactgcagattactgcataaagttgcatgtaggtgagcaaccggggcactcatcagtgacagatggactgaacaagccactcttaagtgctcgtaacttcctgaagagcgaaagcatcggtgcttcccagtgtgttgtcataaaagaaaagcgagaaaaagatgaagaatctatgtcagaatatatgaatgaagcagctgatggggtgccgcataagattgctcaattgaaaacataa
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| Protein seq | MPAPIAPPLCPLALSASPTATTGSGAAPESGGGGRSGIRRGSAATEGHTGAQQGRALGAMDAKKGSGEPEFFSEYGDASRYEVTEVVGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIIFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNILANADCKVKICDFGLARVSFDDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLMGKPLFPGKNVVHQLDLMTDLLGSPSGETISRIRNEKARRYLGNMRKKPRVPFSQKFPGADPMALHLLERLLAFDPKDRPTAAELCVKALTDPYFTGLANSEREPIAQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMMQKYLRGGDQSNFLYPSGVDRFKRQFAHLEEGVAQGDKTSPQLRQHVSLPRERVVRNGDEPDPTADYCIKLHVGEQPGHSSVTDGLNKPLLSARNFLKSESIGASQCVVIKEKREKDEESMSEYMNEAADGVPHKIAQLKT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0026940 | OsCMeo_01g0026940.02 | Chr01 | 27025962 | 27031500 | - | IsoSeq | ||
| CDS seq | atgcgagccggtacgaggtcaccgaggtggtcggcaagggcagctacggcgtggtggccgccgccgtcgacactcacaccggcgggcgcgtcgccatcaagaagatcaacgacgtcttcgagcacatctccgacgccacccgcatcctccgcgagatcaagctactccgcctcctgcgccacccggacatcgtcgagatcaagcacatcatgctcccaccctcccgccgcgagtttcgcgacatttacattatcttcgaactcatggagtccgatctccaccaggtcatcaaggccaacgacgacctcacccccgagcaccaccagttcttcctctaccagctgcttcgtg
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| Protein seq | MRAGTRSPRWSARAATAWWPPPSTLTPAGASPSRRSTTSSSTSPTPPASSARSSYSASCATRTSSRSSTSCSHPPAASFATFTLSSNSWSPISTRSSRPTTTSPPSTTSSSSTSCFV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr01 | 27028211 | 27028309 | - | OsCMeo_01g0026940.01 | OsCMeo_01g0026940.02,OsCMeo_01g0026940.01 | All |
| SE | Chr01 | 27027726 | 27028074 | - | OsCMeo_01g0026940.01 | OsCMeo_01g0026940.02,OsCMeo_01g0026940.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.191170 | 0.000000 | 9.268738 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0643800 | RBH | 0.287308 | 0.253033 | 1.476224 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g45620 | RBH | 0.415797 | 0.168905 | 0.666428 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0643800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027020 | RBH | 0.086787 | 1.207588 | 4.121383 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0026520 | RBH | 0.000000 | 0.0 | 3.321653 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0027870 | RBH | 0.0 | 4.227030 | 18.417429 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026200 | RBH | 0.000000 | 0.117017 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0025970 | RBH | 0.000000 | 0.0 | 15.113628 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0435400 | RBH | 0.7200585 | 1.747395 | 3.882289 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025610 | RBH | 0.196843 | 0.0 | 3.780510 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0424400 | RBH | 0.7988725 | 1.1846375 | 5.665249 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0025890 | RBH | 0.041155 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0025810 | RBH | 0.180923 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026140 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026180 | RBH | 0.183135 | 0.0 | 1.119244 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026010 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026360 | RBH | 0.133202 | 0.000000 | 2.906571 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0026120 | RBH | 0.235971 | 0.0 | 5.026510 |
