Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_12g0020690 | OGI:12066950 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr12:25942991-25949036 | ||||||||
| Gene Symbol | ARF6B, OsARF6b, OsARF25, ARF25 | ||||||||||
| DNA seq | GAAGAAGGCGACAAATGATTGATTTTAATATGTTCCGGGCTCCATTTGGAAATTGGAATCATCAGTTCTAGACATCATATTATAGCTACAGAATAAGGTCAATTCTACAGCGACTGCCATCATTCATCATAGAACTGTTCTTGCCTAGTTGCCTGCCATTAGAGATTTAATAGAGCTAAAGCAGCTATCATACAGCATGTCCATGATCAGATGGAATACAACGGATCATCTAGCTATATTATTGACTGAGTTGCTACTGATTCGGACAGGACTAGTGAAGATCGCATGGAATGCAGGCGATCACGAATGGTGACCCTGCAGTCTTAAGGGTGCTTAGTTTGGATTCTGGTCTACATCTCAGTAGTCCAGAGGCGCTACAGATGCAATGTTTCCGGCGATATTCTGCATGTTGTGGCTTGCAGAATAGTCGTCGCAGGCATTGCTCTGCTGCATCCTTGCTCCAGGTGAGGACAGAAGGCCGTCTCCACCACGAACCAACTGCTGCACCTCCTGTGGCGAGAGTATTTTGATGCACCATACGCTATTTGCAAACTCCCTGAAAAAAAAAGATGGCATAGAATATCATGTTTGTTTGCTTTGAACATTGACAAATATTGTGTTTGCATACGAAACATTTTAGGTTTGTAAGTGCTTACTGCCATGGATCGTCGCCGACGAGAAGAATGTCATTTTCCCGGTCGACAAATACAAGCTGCCAGCCTGATCTTACAGGGTCCTCCAGTTGGCCTTCAAGACCAAAGAGACGCTCAAGCTCACTACGTAACTCGCAGTAGCTGCTGAATCTGGAGATGTCAAGTGATCTCCCAAGGGACCCTGATTTGTAAACCTATTGAAGAAAATGCAGAAGATATTAGCCAGATCATATAGAATAAATGAGCAGCTCACACTCACAGACATGTTAAGTAGGGTAGTAAAAAGAAGAGAAACAGGCATTTCCAAACTTCATACAAAACTTTAAAAAATAATTGCCTCCTTTGCTACCATCAACCTACTAAAATGTTTGTTATTTATCTACTAAGTAAAGTACTTTTAGCGACCAATGTTCGCAATCAGTGAAAATTGAAAAAAGAAATGCAGAGAGAAGAATTAACGCAAGCTAACACACAAGTTGAAAATGCATACCTTCACAAAGGTTGCTCCTTGTGATGGATTTACAGATATGTTATTAAGAGGATTGAACGTTCCAGATTCACCTAAACAATTGGAGGTTGCTAAGGTGTTTTCAGTTGTCAAATCTGCACCACTATATCTCAACAAAGGTATGGCCATAGTATCAGTTTCTCTGTTAGCATCAGTTATGATGCTTGTCATGCCATCCTGGAGTTCAAATGATGATGAAAGTAGGCGGTTCTCAGCATCTGCCCTGCAATCCTGGACGATGGAACACCCTCTTGCTGATTGTGGTGGAAAGGCGCCAGGAAAATGAGATATACCCTGGTGATTTACTTTCTCAATCTTGGGGTGCATGGACGGAGCTTCAGGATGAACAGCAGATTCTAAAGTTAATCGCTTTGAAGGCCACCCATCTGATGCCATTAATTGGCTACTTCGAGGCAAAATAAGAAGGTTTGAGGCTTCCTGGTTAGAGAAGTTGTGGAAATTGTTGTGTAGATGTAAAGGGGGATCACTATTTCCTTCTAAGAGGTTCTGATTGTAGAATGATGATCCACTAAGCAATGATGATTGTGCCTGAGGAGCAGATCCAGACTCAGAAGCTACATCAGCAACATGATGATCACTAGATGGGAGCTGCTGTTGCATCTCTTGACTAGATTGCTCTTGTAAAACATGCTGTCTTTGCTGCTGCTGCAACTCTTGCTCCTTTAGCAGCTGCTGAGTGTTATGCAACTGCAGCCGTGGAAGCTGACCTTGAAGGAACCCAGAGTCACCAGTGTTCTGACAATGGCCTTGCTGAACAACTTGCAGGGGTGACTGCTGAGGTTGAAACTGCACCTGCCCTAGAACATGGCTTGCAAACAGAGAATTTAATCCACTGTTCAGATTATGAGTCTGTTGGTATTGCAGAGTAGCTGGATGCTGCTTTGAAGGGTCCCCATATCGAATTTCTTCCAGTGCTGCTGCAGCCATTTGCTGGTACGTGTCTGGCTTAAGGCCCAGCAATGGAGAATCTATTCTTGGCTGAAGCCATGGTGAGACTCCATGTCCTTGAAAATTCAGGGACTGGGTTCCTCTATTTCCGTCTCGAAGCCACATGAGAGAAGAATAGCGTGCAAAATCGTCATTTCCCCCACCTGCAGAAAAAGAAGTGGTTAAAGAGTATGCTCTTAGAATTATGCGTGCTAGTGTTCCGGCCATCAATCAGCATACCATTGAACATGCCATGCATAGGCAGTCCTGAAGCCCACGGACGCTTAAGTCTTAAAGGAAAAGCACTGGGGTACATCGGAAAGGTTGTCAAAGGCTCAATCTCCCAAAGAGAAACCCTTGGCTGTTTATCACCAGTGGTGGACTCATCCCAACCAACCTAATGTGCCATAAATCCAAAATGAAAAAAAAATCACAAGGAAAACATATCCACAGAAAGGGATCCATGAGGGATGTGATAACAGATTTGACAGACTACTAGATAATGGAACAAGATAACATCATTTCTGTAGAGACCACAAAATATATTTAGCAGATATTACCTTAACAGAACGCCAGTGTGAGTTTGGCCAGCGCACTGAATCTAGATCACTTATGCTGGTGATTGTACCCATGTATCTGAAAGTAAGAGGTAAATATAAGAATTAATGGAGCTTTCACGGTTCATGCTGTGTGCTTAATATCAGCTTACCGCCTGACACTTGACTCCTCTGTCTCGAAAAGCATTCTAAAACGCATTCCAACAGATACACGTGTGTGGTAAACAGCTTTCACATACTTGGCCAATGGAATCACAAATTCAGAAGGGCTAGCCCTGAAAAAGGATGCCCATGTCAATTAAATATGGAAATAAAATAAAACGTTAAAGGCTCTGCTGTAAGATTGCAGTACATTTACCTGGGGTTATAGAAAATAGTGAAGCGACTATTTGTGGCTGCAGCATGAGCTGCTGCTGCAAGAAGACCTATATGCATGCTATCGCTTGACAACACGGAAGAGGGCATAACAGTCTGTTGGCGATTTGCACGACGTATTCCCAAAAGAAGTTGATTGTTATCATTCCTGGTAAAAATGATAAAGGTAATTAAGTCTCAGCAATGAGTACAACCTCTAGCAACAGTATACAATTTACATAAGGAATAAAGTGGGTGGTACCAGATAAATATAACAGAGTCTCCTGCTACTAGTCTTTTCGCACTCACAAACACACTCCAGCCTGTTGTCAGGAGATGCCTTTTAGGCTGACCTGCACGACAAATGCATAGCCAATTGAAAGTTCAATAGAAGAAGATACCCTCACAATATAATTTCATAATTCAACAATTCTGCAAGGCAGGAACAGAAGGAGGCTAGTTGCAGTATTGTCATTATAGCATGTCCAGGTAATTTCTTAGCCAGATAAAAATGCAAAAACAGATCTTGGCAACAAAGAAAAAAGAGCAAAACGGATAGATGTCATGTCTAATGGAAATGCTATCTAAAAGGCATAGTACATGATTTTATGTCAATTTTTTTGTGTACACAAACAACTCATAATCAGTTCTATGTGTGTCGGCCATAGTTACATACCACGAAATATATGGCGAAATTTCCATTCATTATCATGCAAATCTCTTGCAATCAGCTCCTGTGCCGGAGGCTGCTGTGAAAAATCCTACAGAGAACTAAAGGAGTCAATTTGAAGAACACATAGCAAATGAACATTTCCTACCAAAAAAAAGACTGAGCTTAAAGGCATACTAGTGGAGGGAAGACTTTCTCAGCTGCCCGGCGGGGAACAGAGAAACCACCATGAGTGCTCGTGTCACTTGCAGTCAATGTCTTGCAGAAGTAATTAGTGGGTTGCTTGCTAGCAGCACCCAACTCCATTGGAAGGAAAGGCTCCTTTTGCTCTTCCTGTCAACAGGATTACATGACAAATACATAATCCTTGTAACATCTTTGCCCTTTTAAAAGAAATAAGGCTAGAAGTGCAAAGCAGTGGTCAAATACCGGGCTCAATGGTTGCAATGTCATCTGAGCATAAACTTCATCTGTCTCTGCATCAGCCTGCAAAAGCACCAGGTGAATTATCATAAGCTGCTTATTAAGAAGCTACATGATGGTTTCTTTAAGAGTGAACTCACATGCATGGTGACATTATGAAGCTGGCAGATTAACTGAGGAGGTAAGTTTGGATAATTTGGGATTTGAGCATCAACTTCCTTATTAGTTGATGCCGCAACCTGCACAGAACTAAAATTACTTTAGACAGTACAGTTTCAGTTCATTCTTCTGCCATATTAAGTTTAATGATGCACTGAGCAAACAATAAAGACAATCCTCTGCCCTATTATGTACTGATGCACAAATGCAAAAGCAGAGCTGTTCTACCTTCTTTTATAAATTCTAGTAAATTCGAGTCAACAAAATCCGGCCATGCCTAGCATAATGAAAGAGATGTGCACAGACTACAAACCAAGTGACTGACCTGCTCGCTATGGCCCTGTGGAAAGTAGACGACCCTGCTCCTGACCACTGGCAAAGACACAAGGGGCCCAGCGCATGCATGCCACAGCTCCGAGTTCAGACATCTTTGTTCCCCTGCAACATGCCAAACACACATGAGCTGAACAGCAAACCACCAGAAAGTTAAGTTCATGTGAAGCTACTATTTGTACTTGCCCACAGACAGTAGGAGGTTCAGTCAGTATCAAATAATGTTATAACATGAGGGCAATGAACAGAGCCAAGTAATGTAGGAGTAGTTCTTTTTTTTTCTTTCTTTTTTCTTTGTGTGTGTATGTGCGGAGTGTGTGCAAGGCAGCAATGGAGACTCATTTATGCATTATGTAATCATGCACAAACAACTCAAAGTGCAGAATCACAAAGCTCCATGATCCATAATCCACTTTACAATGCAGGCATCAACACAAGCTGAGAAAGTGCAGAACTGAAACAATGTCGAAATTGTGAGCAAGGATATATACCGTCGTTCTCCGGCAAGGCCTGCGGCATATCCGCCGACGCCGGCGGAGAGAGCTTCATCTCCAATCACCAGTGCACCCGTCGCCAAAGAGCACGAAACTCCGCCGCACCAGGATACCGGAGAAGCTGCTGGTCAGCTTCCCATCATGCTCCCAGCAGCAGCAGCAAACACCTGCCTTCCTCTCTTGCGCCCAGAAATATCTTCCATTTTTTTCTCCCTCAACAACTAACCAAAACCTGGACCGTCGCAGCAAATCCTCCCCTTCATCTCCCCGAAAAAATTCCACACAAACTCTTTAAATCAATCAAACTTGGAAACCAATCACCCCCCTCAGAGCTCGAGTATTTTCACCCAAAACTGATGAAAAACACCCAGGCGACCGCAACTCGATCCGAAGAACCGGATTTTCGCCAACGGCGGGAGCAAGTGAGCGGAGAAACCGAAGAACGCCGCCGACCCCGAGTTCATCAGATCAACACGCAGCTCATCCCAAGCACTCAAAACACAGCACCTTCACTCTCGGCGACGGCTAACCCAAACCGCCGCCCTCAAATCGCCACCGACACTAGCCCGCAGCCGCCGCCGCCGCGGACGAGTCCAGCCTTCCTCTCAGGCGCCGCCGCCGCAACCGCGCACCCCCCGGAGCTCACGAGATCGCGGAATCAGGCGACGACGACCACCACCACCACCAAACGGCGTAGCATTCGGCGCCGGCGGCGGAATCAGGCGGCGCGACAGCGAGGCGGGAGCTGGGGGCGCGCGGTCTCCGAGACGGCGGGGAGGGTGGTGGGGGCGCGAACCCTAGGTGCTAGGGCTAGGCCGCCATGGCCGGATCGAGGTGTGAGTGGTGGAGGTGGTGGTCGAGTTTTTTTTTTCTTCTTTTTTTCTTTCCGTTTTGAGGGGTTTAGTAGGAAGAGAAGAAAAACGGAGAGAGAGCTTCTTGGAGGTAGT
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| CDS seq | ATGAAGCTCTCTCCGCCGGCGTCGGCGGATATGCCGCAGGCCTTGCCGGAGAACGACGGGGAACAAAGATGTCTGAACTCGGAGCTGTGGCATGCATGCGCTGGGCCCCTTGTGTCTTTGCCAGTGGTCAGGAGCAGGGTCGTCTACTTTCCACAGGGCCATAGCGAGCAGGTTGCGGCATCAACTAATAAGGAAGTTGATGCTCAAATCCCAAATTATCCAAACTTACCTCCTCAGTTAATCTGCCAGCTTCATAATGTCACCATGCATGCTGATGCAGAGACAGATGAAGTTTATGCTCAGATGACATTGCAACCATTGAGCCCGGAAGAGCAAAAGGAGCCTTTCCTTCCAATGGAGTTGGGTGCTGCTAGCAAGCAACCCACTAATTACTTCTGCAAGACATTGACTGCAAGTGACACGAGCACTCATGGTGGTTTCTCTGTTCCCCGCCGGGCAGCTGAGAAAGTCTTCCCTCCACTAGATTTTTCACAGCAGCCTCCGGCACAGGAGCTGATTGCAAGAGATTTGCATGATAATGAATGGAAATTTCGCCATATATTTCGTGGTCAGCCTAAAAGGCATCTCCTGACAACAGGCTGGAGTGTGTTTGTGAGTGCGAAAAGACTAGTAGCAGGAGACTCTGTTATATTTATCTGGAATGATAACAATCAACTTCTTTTGGGAATACGTCGTGCAAATCGCCAACAGACTGTTATGCCCTCTTCCGTGTTGTCAAGCGATAGCATGCATATAGGTCTTCTTGCAGCAGCAGCTCATGCTGCAGCCACAAATAGTCGCTTCACTATTTTCTATAACCCCAGGGCTAGCCCTTCTGAATTTGTGATTCCATTGGCCAAGTATGTGAAAGCTGTTTACCACACACGTGTATCTGTTGGAATGCGTTTTAGAATGCTTTTCGAGACAGAGGAGTCAAGTGTCAGGCGATACATGGGTACAATCACCAGCATAAGTGATCTAGATTCAGTGCGCTGGCCAAACTCACACTGGCGTTCTGTTAAGGTTGGTTGGGATGAGTCCACCACTGGTGATAAACAGCCAAGGGTTTCTCTTTGGGAGATTGAGCCTTTGACAACCTTTCCGATGTACCCCAGTGCTTTTCCTTTAAGACTTAAGCGTCCGTGGGCTTCAGGACTGCCTATGCATGGCATGTTCAATGGTGGGGGAAATGACGATTTTGCACGCTATTCTTCTCTCATGTGGCTTCGAGACGGAAATAGAGGAACCCAGTCCCTGAATTTTCAAGGACATGGAGTCTCACCATGGCTTCAGCCAAGAATAGATTCTCCATTGCTGGGCCTTAAGCCAGACACGTACCAGCAAATGGCTGCAGCAGCACTGGAAGAAATTCGATATGGGGACCCTTCAAAGCAGCATCCAGCTACTCTGCAATACCAACAGACTCATAATCTGAACAGTGGATTAAATTCTCTGTTTGCAAGCCATGTTCTAGGGCAGGTGCAGTTTCAACCTCAGCAGTCACCCCTGCAAGTTGTTCAGCAAGGCCATTGTCAGAACACTGGTGACTCTGGGTTCCTTCAAGGTCAGCTTCCACGGCTGCAGTTGCATAACACTCAGCAGCTGCTAAAGGAGCAAGAGTTGCAGCAGCAGCAAAGACAGCATGTTTTACAAGAGCAATCTAGTCAAGAGATGCAACAGCAGCTCCCATCTAGTGATCATCATGTTGCTGATGTAGCTTCTGAGTCTGGATCTGCTCCTCAGGCACAATCATCATTGCTTAGTGGATCATCATTCTACAATCAGAACCTCTTAGAAGGAAATAGTGATCCCCCTTTACATCTACACAACAATTTCCACAACTTCTCTAACCAGGAAGCCTCAAACCTTCTTATTTTGCCTCGAAGTAGCCAATTAATGGCATCAGATGGGTGGCCTTCAAAGCGATTAACTTTAGAATCTGCTGTTCATCCTGAAGCTCCGTCCATGCACCCCAAGATTGAGAAAGTAAATCACCAGGGTATATCTCATTTTCCTGGCGCCTTTCCACCACAATCAGCAAGAGGGTGTTCCATCGTCCAGGATTGCAGGGCAGATGCTGAGAACCGCCTACTTTCATCATCATTTGAACTCCAGGATGGCATGACAAGCATCATAACTGATGCTAACAGAGAAACTGATACTATGGCCATACCTTTGTTGAGATATAGTGGTGCAGATTTGACAACTGAAAACACCTTAGCAACCTCCAATTGTTTAGGTGAATCTGGAACGTTCAATCCTCTTAATAACATATCTGTAAATCCATCACAAGGAGCAACCTTTGTGAAGGTTTACAAATCAGGGTCCCTTGGGAGATCACTTGACATCTCCAGATTCAGCAGCTACTGCGAGTTACGTAGTGAGCTTGAGCGTCTCTTTGGTCTTGAAGGCCAACTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTCGACCGGGAAAATGACATTCTTCTCGTCGGCGACGATCCATGGCAGGAGTTTGCAAATAGCGTATGGTGCATCAAAATACTCTCGCCACAGGAGGTGCAGCAGTTGGTTCGTGGTGGAGACGGCCTTCTGTCCTCACCTGGAGCAAGGATGCAGCAGAGCAATGCCTGCGACGACTATTCTGCAAGCCACAACATGCAGAATATCGCCGGAAACATTGCATCTGTAGCGCCTCTGGACTACTGA
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| Protein seq | MKLSPPASADMPQALPENDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLKRPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGNRGTQSLNFQGHGVSPWLQPRIDSPLLGLKPDTYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQFQPQQSPLQVVQQGHCQNTGDSGFLQGQLPRLQLHNTQQLLKEQELQQQQRQHVLQEQSSQEMQQQLPSSDHHVADVASESGSAPQAQSSLLSGSSFYNQNLLEGNSDPPLHLHNNFHNFSNQEASNLLILPRSSQLMASDGWPSKRLTLESAVHPEAPSMHPKIEKVNHQGISHFPGAFPPQSARGCSIVQDCRADAENRLLSSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENTLATSNCLGESGTFNPLNNISVNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARMQQSNACDDYSASHNMQNIAGNIASVAPLDY |
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| Function | Auxin response factor 25 [UniProtKB/Swiss-Prot:Q2QM84] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_12g0020690 | OsAzu_12g0020690.01 | Chr12 | 25942991 | 25949036 | - | NAM | ||
| CDS seq | ATGAAGCTCTCTCCGCCGGCGTCGGCGGATATGCCGCAGGCCTTGCCGGAGAACGACGGGGAACAAAGATGTCTGAACTCGGAGCTGTGGCATGCATGCGCTGGGCCCCTTGTGTCTTTGCCAGTGGTCAGGAGCAGGGTCGTCTACTTTCCACAGGGCCATAGCGAGCAGGTTGCGGCATCAACTAATAAGGAAGTTGATGCTCAAATCCCAAATTATCCAAACTTACCTCCTCAGTTAATCTGCCAGCTTCATAATGTCACCATGCATGCTGATGCAGAGACAGATGAAGTTTATGCTCAGATGACATTGCAACCATTGAGCCCGGAAGAGCAAAAGGAGCCTTTCCTTCCAATGGAGTTGGGTGCTGCTAGCAAGCAACCCACTAATTACTTCTGCAAGACATTGACTGCAAGTGACACGAGCACTCATGGTGGTTTCTCTGTTCCCCGCCGGGCAGCTGAGAAAGTCTTCCCTCCACTAGATTTTTCACAGCAGCCTCCGGCACAGGAGCTGATTGCAAGAGATTTGCATGATAATGAATGGAAATTTCGCCATATATTTCGTGGTCAGCCTAAAAGGCATCTCCTGACAACAGGCTGGAGTGTGTTTGTGAGTGCGAAAAGACTAGTAGCAGGAGACTCTGTTATATTTATCTGGAATGATAACAATCAACTTCTTTTGGGAATACGTCGTGCAAATCGCCAACAGACTGTTATGCCCTCTTCCGTGTTGTCAAGCGATAGCATGCATATAGGTCTTCTTGCAGCAGCAGCTCATGCTGCAGCCACAAATAGTCGCTTCACTATTTTCTATAACCCCAGGGCTAGCCCTTCTGAATTTGTGATTCCATTGGCCAAGTATGTGAAAGCTGTTTACCACACACGTGTATCTGTTGGAATGCGTTTTAGAATGCTTTTCGAGACAGAGGAGTCAAGTGTCAGGCGATACATGGGTACAATCACCAGCATAAGTGATCTAGATTCAGTGCGCTGGCCAAACTCACACTGGCGTTCTGTTAAGGTTGGTTGGGATGAGTCCACCACTGGTGATAAACAGCCAAGGGTTTCTCTTTGGGAGATTGAGCCTTTGACAACCTTTCCGATGTACCCCAGTGCTTTTCCTTTAAGACTTAAGCGTCCGTGGGCTTCAGGACTGCCTATGCATGGCATGTTCAATGGTGGGGGAAATGACGATTTTGCACGCTATTCTTCTCTCATGTGGCTTCGAGACGGAAATAGAGGAACCCAGTCCCTGAATTTTCAAGGACATGGAGTCTCACCATGGCTTCAGCCAAGAATAGATTCTCCATTGCTGGGCCTTAAGCCAGACACGTACCAGCAAATGGCTGCAGCAGCACTGGAAGAAATTCGATATGGGGACCCTTCAAAGCAGCATCCAGCTACTCTGCAATACCAACAGACTCATAATCTGAACAGTGGATTAAATTCTCTGTTTGCAAGCCATGTTCTAGGGCAGGTGCAGTTTCAACCTCAGCAGTCACCCCTGCAAGTTGTTCAGCAAGGCCATTGTCAGAACACTGGTGACTCTGGGTTCCTTCAAGGTCAGCTTCCACGGCTGCAGTTGCATAACACTCAGCAGCTGCTAAAGGAGCAAGAGTTGCAGCAGCAGCAAAGACAGCATGTTTTACAAGAGCAATCTAGTCAAGAGATGCAACAGCAGCTCCCATCTAGTGATCATCATGTTGCTGATGTAGCTTCTGAGTCTGGATCTGCTCCTCAGGCACAATCATCATTGCTTAGTGGATCATCATTCTACAATCAGAACCTCTTAGAAGGAAATAGTGATCCCCCTTTACATCTACACAACAATTTCCACAACTTCTCTAACCAGGAAGCCTCAAACCTTCTTATTTTGCCTCGAAGTAGCCAATTAATGGCATCAGATGGGTGGCCTTCAAAGCGATTAACTTTAGAATCTGCTGTTCATCCTGAAGCTCCGTCCATGCACCCCAAGATTGAGAAAGTAAATCACCAGGGTATATCTCATTTTCCTGGCGCCTTTCCACCACAATCAGCAAGAGGGTGTTCCATCGTCCAGGATTGCAGGGCAGATGCTGAGAACCGCCTACTTTCATCATCATTTGAACTCCAGGATGGCATGACAAGCATCATAACTGATGCTAACAGAGAAACTGATACTATGGCCATACCTTTGTTGAGATATAGTGGTGCAGATTTGACAACTGAAAACACCTTAGCAACCTCCAATTGTTTAGGTGAATCTGGAACGTTCAATCCTCTTAATAACATATCTGTAAATCCATCACAAGGAGCAACCTTTGTGAAGGTTTACAAATCAGGGTCCCTTGGGAGATCACTTGACATCTCCAGATTCAGCAGCTACTGCGAGTTACGTAGTGAGCTTGAGCGTCTCTTTGGTCTTGAAGGCCAACTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTCGACCGGGAAAATGACATTCTTCTCGTCGGCGACGATCCATGGCAGGAGTTTGCAAATAGCGTATGGTGCATCAAAATACTCTCGCCACAGGAGGTGCAGCAGTTGGTTCGTGGTGGAGACGGCCTTCTGTCCTCACCTGGAGCAAGGATGCAGCAGAGCAATGCCTGCGACGACTATTCTGCAAGCCACAACATGCAGAATATCGCCGGAAACATTGCATCTGTAGCGCCTCTGGACTACTGA
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| Protein seq | MKLSPPASADMPQALPENDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLKRPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGNRGTQSLNFQGHGVSPWLQPRIDSPLLGLKPDTYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQFQPQQSPLQVVQQGHCQNTGDSGFLQGQLPRLQLHNTQQLLKEQELQQQQRQHVLQEQSSQEMQQQLPSSDHHVADVASESGSAPQAQSSLLSGSSFYNQNLLEGNSDPPLHLHNNFHNFSNQEASNLLILPRSSQLMASDGWPSKRLTLESAVHPEAPSMHPKIEKVNHQGISHFPGAFPPQSARGCSIVQDCRADAENRLLSSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENTLATSNCLGESGTFNPLNNISVNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARMQQSNACDDYSASHNMQNIAGNIASVAPLDY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.194566 | 5.804523 | 8.066942 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0613700 | RBH | 1.124249 | 1.332115 | 9.475780 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g41950 | RBH | 0.743442 | 0.877179 | 2.388124 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0613700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0020790 | RBH | 0.064592 | 2.849716 | 7.065897 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0021130 | RBH | 0.278086 | 9.126553 | 19.555054 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0020450 | RBH | 0.036117 | 0.457296 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0020050 | RBH | 3.955822 | 30.028366 | 34.143673 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0349200 | RBH | 7.999629 | 16.9709425 | 21.773841 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0019940 | RBH | 0.097504 | 1.041806 | 2.550381 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0378800 | RBH | 5.9624105 | 11.2637795 | 41.964081 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0020170 | RBH | 0.125458 | 0.240982 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0020410 | RBH | 0.138112 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0020350 | RBH | 1.805402 | 22.071159 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0020400 | RBH | 0.458378 | 0.0 | 1.554555 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0020580 | RBH | 0.0 | 10.687864 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G020090 | RBH | 0.297039 | 7.612211 | 5.284796 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0019890 | RBH | 0.264535 | 19.414860 | 10.528757 |
