Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0022960 | OGI:01040660 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:27140316-27144395 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGGCGCCGCTCGGTGGCGTAGATGGGCGGCACTCGGGGGAGACCGGAGGCGCATGGTGCGACCGGTGGCCGGCAGGGAAGAAGAGCGGCGAAGGCACTCGTTGGCGAGACGGGCTGAGGCCGGGGGAAACCGGAGGCCGCCGCCTCCTTGTCGCCCACCGCCACGTTGCCGGACCTCCTCCCCTCCCGCCTCGCCCCGGCGACCTCGTCCCACACCACCCGCCGGTCGGCTGGCTCAAAGGAAAAAAGTGAGAGAGAGATGACGTGGCATACTGACATGTGGGGCCCACGTGAGTCCCACGCTGAGTCAGCTGCCACGTTGGACAAAACCGGGGTCAAAATCACCGAAGGACCTAAAGTGAACGGTTTTGTAAGATGAGGGATGTCATATATCTGGTTTTGCGGTTGGGGGACGATTTTGTAACTCGATGACAAGTTGAGGGACCTTCCGTATACATTTTCCTTTTCCACACCTCTGGATAAGATTATTTTTTTCCCAGGCCGGGGTGAGGGGAAAAGGCTAGGATGGGCTGGGTTAGAATCCCGACTAGGCTTAACCGAACACACATTTCTATGCAGGCCGTGATTTTTCCCATGCCAGGCTGATCCATGGGGTTTGGGCCACAATCCTGCCCGAAACGAACAAGGCCTTATGCTTTTCTTGCAAGTTTGTATGGAATAATAAGATGAGACCATTTTCTTATTTGAGAATTTTCTTCTTCTTTATGTGCATGATAGGGAGACACAAGATTTCTACAAGAGCCAGATTGAAATACTCAAGAAAGAAATGCAATGTATGTCAAAAGGTTTCATTGAAGAGCGCAAGGTCTTACAGAGAGAGATGCAACTGTTTTACCAAAATTCCCAGCTGCAGCTCAATGAGCAGATCAGTGAGCAACAGAGGAGGATGGAACAGATCTGGGGGCAGTTCAACACCTTGATTTCGGTAAACACCTACTTTCTTGTTTAATCTTTATAGTTGGAAGCTTCATAATTGGCTTTCAAGTTTTGATAGATTCGACTATTCTTGACTGAAAATTTTCTAGGTCCTCTCCCTTATATTCTTAGTACTCTTAGTTCTTTACTTCCTTGTGAGAATGCATGGTAACACCAAAGGCTACAAACCTACCAAAGTCACTCGGTCACTGAACTGAAGACTACGGAAAACAGCAATATCTACAATTATCAGAACTAATGATATGAACCAAAGGACAACCCAATATAATAGCAACTAAGCTTGATAGTTTTTTTGACATTTTTATACTAACAAAATGGGAACTTCAAGGAAACTGAGTCAAGGAAAAAAAATCCTTATGAAAGGCATTTCCGTCATTCCGTGTTTCACTGTCAAAAAACAATCTCATCATTTGAAGAATTTAGCATCTTTGCTGAGCTGAATTTATTTATTGCTCTTTCTGACTAATGATTGTAAATTTGTTTCTGTGACAGGACACAAGTACTCCTGGGGACCATGTTAAGAAACACACTAATCACAGGTAGGAAATCTCTTGTTCTAGAAAATTGAAGTATCAAATCTTTGGCCCGTCTCGTACACAGGCTCGCCACTCAGTAGACTTTATGTAGGTGATTCTAATTAGTTAAAATTTTGGACATAGTATACTTGATCATTTAACATAACTTTTAAGGGGCTTATCTTATCAGAGAGAAATTAGAACGCACCGACTGAAATTTGAGAACAGATGTTGCAACGACAAGTTCTCGAGACACGTCATAACAGCTGATGACGGCAGTCCTATCAAAGTAGCCATATATGATCATGATAATAAGATTATCACAAATGGACCTTTATCCTCAATGCAAGTTAGGATTGTTGTCATGAATGGCGAGTTTAACAAGGACAATAAAGTGCAGTGGAATAGAGACTCCTTCCTTCAGAACATAGTATATGGGCGGCCTGGAAAACTACCTTTGTTTGCCAACGAACTTTATCTAAGGCTGGAAAATGGTGTGGCTAACCTCTATGGTGCCAAATTCCAGGATAACTCGAGTTTTCTTCCAAGCAAGCAGTTCAGGTTAGGAGTCATGGCAGCTGATGATAGCATATCAGAAAAAATCCTCGAAGGAATATCTGAATCTTTTGCCGTAAAGGATGGCCGGGGATTCTGTAAGTAATATTAAGTTTCATCCTAGCACCAAAAGTTTAGACAATCATACACATTACTCTTCATATAAATAGCTCTCATTACATATATGCATTCTGTCAATCTCTCTAACAAAATTCTTCTGTTGCATAAGCTAGCTAAAGGACAAGTGCAAAACATTGTTATATTCAAGTTCCTAACGCCTTTTCAACATGATACTTATTTTTACACCTCATAGCGTCTTTACTTTTAATTAAAAGGCCGGTAACTCTTAAACAGCCATACTCAAAAGAGAAACCCGCAACATCCAGCATCATTTAGTAATGAGGCCCTAAACTAGAAAAGTGGAGGCTTCTCTATCATTTATTATGCCACAATCCTCAATTTGAAGAACTGTTCTGTTATGTAAGGTAAATTTGATCAGTAAACGTATGAAACTATCTTCCTTTGTGCATCCTGGCAATGGTCTGCTAGGTGTGAACACAACCTTTTAAACCGAACCTTTTCATCAATAACTGATTCATATGTCTACTAGGTCTCATTCTTCTACATCTAATGCCTGGCGTCTTTCTGTACAGCAACAAAGAAGAGTGAACATCCTTCTCCCTGTGATGCTGTATAAAAACTGACTCGAATTGCCATGAATGGTGATAGGCACAAGTTACTACAGCATAAAGGTATCAAGACGGAGGGGGATTTTTTATGCTTCTTCCATAAAAATCCCAAAGAATTGCGTAAGGTACGCAATGAATTTCATTATTTATTTCTATTCTGTACTCCTATAGAATGTAACATGCCACAATAACCTGTATAGATTTTGGGAAATATTTCTGATCAAGATTGGGACATGATCATTAACCATGCTCTTAAATGCAAGCCAAGACCAGCAAATTACTCTAGCTACACTGAAGAAATGAATGTTCATCAAGAACATGAATCATTTCATACCAGCAATGGCAATTGTTACCTTAAGGGATCATGCTCAATGCAACCAAGTCCAGCACCAGCAAGTAAGTCTGGCTTGCCTCTTTTGAGTAACTTAATTGCCGCCATTACTCCTTCATGGTTTGCTGTGGAAATTACTTCATGTCAAATGCTTCCTGATTTATGCCTTGCTTCTGTTGATACCCTGAACAGATTTACCAGTTTCTGAAAATCACACTGAACAAATTGACATCCAACTATCCAAGCAACATGCCAGCAGATTTCTTCAACAAATAATGGACTGCCATCTGGTGCATCATGGAGAATATCTCAATAAGGCCAAGTTCCATCCAAATACTTTGGACCAGAGCGTGAAGGCCTATGGTAATTTGCTTCTTTGAATAATATGGTATCTTCTAAAGGAAAGCTTAACTGCTCAGCTTTACTTTGGATGTTCCACAGGAGAATTTCAGACCATGCAAGCCAGCCAGGAAGTTTCAACCATCGAAAATGAGGTTCTGTCAGTTTCCTTCATGGATAATAATACCTTAGAAGGGTCTAGTTCCCAGCAACGGCCTTCTTTGAAGCACAACACAATGCCTGATGGTAACAAATTTATTTTTATGACAGTTCTCGTGTATCAGAAGAACAGTTGTCACAGGTTAGCACATCTGCAGGTGACACCATGGAAGAGTTTCTGGCATCTCTGGAAAAAGATCTGCTTCAAGATGACTCGCGAAGTGATTTCACTGAAACTTATTGGGGAGATGCCTACAATGCAGTGAAGCAAACTGGGGGACTTCCACGTGTCAACGAAGCACACAATATGAGCCGGGGTGGAATTTCACCTGCCAGTGAGGTAGGAAGTACAGTTTATGGCGGAATTTCTCCTGCCAGTGAAGTAGGCAGTAGAAGCTACACGGCATTTTCACCTTCGCCTGTCAGTAAAAGAGGCAGTATAGGTTATGGTGGACTTTCACCTGCCAGTGAAGCAGGTGGCAGAAGATGCAGGACATTTTCACCGGCCAGCAGCAGGTTTAAGGGACCTTAA
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| CDS seq | ATGGCGGCGCCGCTCGGTGGCGTAGATGGGCGGCACTCGGGGGAGACCGGAGGCGCATGGGAGACACAAGATTTCTACAAGAGCCAGATTGAAATACTCAAGAAAGAAATGCAATGTATGTCAAAAGGTTTCATTGAAGAGCGCAAGGTCTTACAGAGAGAGATGCAACTGTTTTACCAAAATTCCCAGCTGCAGCTCAATGAGCAGATCAGTGAGCAACAGAGGAGGATGGAACAGATCTGGGGGCAGTTCAACACCTTGATTTCGGACACAAGTACTCCTGGGGACCATGTTAAGAAACACACTAATCACAGATGTTGCAACGACAAGTTCTCGAGACACGTCATAACAGCTGATGACGGCAGTCCTATCAAAGTAGCCATATATGATCATGATAATAAGATTATCACAAATGGACCTTTATCCTCAATGCAAGTTAGGATTGTTGTCATGAATGGCGAGTTTAACAAGGACAATAAAGTGCAGTGGAATAGAGACTCCTTCCTTCAGAACATAGTATATGGGCGGCCTGGAAAACTACCTTTGTTTGCCAACGAACTTTATCTAAGGCTGGAAAATGGTGTGGCTAACCTCTATGGTGCCAAATTCCAGGATAACTCGAGTTTTCTTCCAAGCAAGCAGTTCAGGCACAAGTTACTACAGCATAAAGGTATCAAGACGGAGGGGGATTTTTTATGCTTCTTCCATAAAAATCCCAAAGAATTGCGTAAGATTTTGGGAAATATTTCTGATCAAGATTGGGACATGATCATTAACCATGCTCTTAAATGCAAGCCAAGACCAGCAAATTACTCTAGCTACACTGAAGAAATGAATGTTCATCAAGAACATGAATCATTTCATACCAGCAATGGCAATTGTTACCTTAAGGGATCATGCTCAATGCAACCAAGTCCAGCACCAGCAAATTTACCAGTTTCTGAAAATCACACTGAACAAATTGACATCCAACTATCCAAGCAACATGCCAGCAGATTTCTTCAACAAATAATGGACTGCCATCTGGTGCATCATGGAGAATATCTCAATAAGGCCAAGTTCCATCCAAATACTTTGGACCAGAGCGTGAAGGCCTATGGAGAATTTCAGACCATGCAAGCCAGCCAGGAAGTTTCAACCATCGAAAATGAGGTTCTTTCTCGTGTATCAGAAGAACAGTTGTCACAGGTTAGCACATCTGCAGGTGACACCATGGAAGAGTTTCTGGCATCTCTGGAAAAAGATCTGCTTCAAGATGACTCGCGAAGTGATTTCACTGAAACTTATTGGGGAGATGCCTACAATGCAGTGAAGCAAACTGGGGGACTTCCACGTGTCAACGAAGCACACAATATGAGCCGGGGTGGAATTTCACCTGCCAGTGAGGTAGGAAGTACAGTTTATGGCGGAATTTCTCCTGCCAGTGAAGTAGGCAGTAGAAGCTACACGGCATTTTCACCTTCGCCTGTCAGTAAAAGAGGCAGTATAGGTTATGGTGGACTTTCACCTGCCAGTGAAGCAGGTGGCAGAAGATGCAGGACATTTTCACCGGCCAGCAGCAGGTTTAAGGGACCTTAA
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| Protein seq | MAAPLGGVDGRHSGETGGAWETQDFYKSQIEILKKEMQCMSKGFIEERKVLQREMQLFYQNSQLQLNEQISEQQRRMEQIWGQFNTLISDTSTPGDHVKKHTNHRCCNDKFSRHVITADDGSPIKVAIYDHDNKIITNGPLSSMQVRIVVMNGEFNKDNKVQWNRDSFLQNIVYGRPGKLPLFANELYLRLENGVANLYGAKFQDNSSFLPSKQFRHKLLQHKGIKTEGDFLCFFHKNPKELRKILGNISDQDWDMIINHALKCKPRPANYSSYTEEMNVHQEHESFHTSNGNCYLKGSCSMQPSPAPANLPVSENHTEQIDIQLSKQHASRFLQQIMDCHLVHHGEYLNKAKFHPNTLDQSVKAYGEFQTMQASQEVSTIENEVLSRVSEEQLSQVSTSAGDTMEEFLASLEKDLLQDDSRSDFTETYWGDAYNAVKQTGGLPRVNEAHNMSRGGISPASEVGSTVYGGISPASEVGSRSYTAFSPSPVSKRGSIGYGGLSPASEAGGRRCRTFSPASSRFKGP |
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| Function | Calmodulin-binding protein 60 B [UniProtKB/Swiss-Prot:Q9FKL6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0022960 | OsAzu_11g0022960.01 | Chr11 | 27140316 | 27144395 | + | NAM | ||
| CDS seq | ATGGCGGCGCCGCTCGGTGGCGTAGATGGGCGGCACTCGGGGGAGACCGGAGGCGCATGGGAGACACAAGATTTCTACAAGAGCCAGATTGAAATACTCAAGAAAGAAATGCAATGTATGTCAAAAGGTTTCATTGAAGAGCGCAAGGTCTTACAGAGAGAGATGCAACTGTTTTACCAAAATTCCCAGCTGCAGCTCAATGAGCAGATCAGTGAGCAACAGAGGAGGATGGAACAGATCTGGGGGCAGTTCAACACCTTGATTTCGGACACAAGTACTCCTGGGGACCATGTTAAGAAACACACTAATCACAGATGTTGCAACGACAAGTTCTCGAGACACGTCATAACAGCTGATGACGGCAGTCCTATCAAAGTAGCCATATATGATCATGATAATAAGATTATCACAAATGGACCTTTATCCTCAATGCAAGTTAGGATTGTTGTCATGAATGGCGAGTTTAACAAGGACAATAAAGTGCAGTGGAATAGAGACTCCTTCCTTCAGAACATAGTATATGGGCGGCCTGGAAAACTACCTTTGTTTGCCAACGAACTTTATCTAAGGCTGGAAAATGGTGTGGCTAACCTCTATGGTGCCAAATTCCAGGATAACTCGAGTTTTCTTCCAAGCAAGCAGTTCAGGCACAAGTTACTACAGCATAAAGGTATCAAGACGGAGGGGGATTTTTTATGCTTCTTCCATAAAAATCCCAAAGAATTGCGTAAGATTTTGGGAAATATTTCTGATCAAGATTGGGACATGATCATTAACCATGCTCTTAAATGCAAGCCAAGACCAGCAAATTACTCTAGCTACACTGAAGAAATGAATGTTCATCAAGAACATGAATCATTTCATACCAGCAATGGCAATTGTTACCTTAAGGGATCATGCTCAATGCAACCAAGTCCAGCACCAGCAAATTTACCAGTTTCTGAAAATCACACTGAACAAATTGACATCCAACTATCCAAGCAACATGCCAGCAGATTTCTTCAACAAATAATGGACTGCCATCTGGTGCATCATGGAGAATATCTCAATAAGGCCAAGTTCCATCCAAATACTTTGGACCAGAGCGTGAAGGCCTATGGAGAATTTCAGACCATGCAAGCCAGCCAGGAAGTTTCAACCATCGAAAATGAGGTTCTTTCTCGTGTATCAGAAGAACAGTTGTCACAGGTTAGCACATCTGCAGGTGACACCATGGAAGAGTTTCTGGCATCTCTGGAAAAAGATCTGCTTCAAGATGACTCGCGAAGTGATTTCACTGAAACTTATTGGGGAGATGCCTACAATGCAGTGAAGCAAACTGGGGGACTTCCACGTGTCAACGAAGCACACAATATGAGCCGGGGTGGAATTTCACCTGCCAGTGAGGTAGGAAGTACAGTTTATGGCGGAATTTCTCCTGCCAGTGAAGTAGGCAGTAGAAGCTACACGGCATTTTCACCTTCGCCTGTCAGTAAAAGAGGCAGTATAGGTTATGGTGGACTTTCACCTGCCAGTGAAGCAGGTGGCAGAAGATGCAGGACATTTTCACCGGCCAGCAGCAGGTTTAAGGGACCTTAA
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| Protein seq | MAAPLGGVDGRHSGETGGAWETQDFYKSQIEILKKEMQCMSKGFIEERKVLQREMQLFYQNSQLQLNEQISEQQRRMEQIWGQFNTLISDTSTPGDHVKKHTNHRCCNDKFSRHVITADDGSPIKVAIYDHDNKIITNGPLSSMQVRIVVMNGEFNKDNKVQWNRDSFLQNIVYGRPGKLPLFANELYLRLENGVANLYGAKFQDNSSFLPSKQFRHKLLQHKGIKTEGDFLCFFHKNPKELRKILGNISDQDWDMIINHALKCKPRPANYSSYTEEMNVHQEHESFHTSNGNCYLKGSCSMQPSPAPANLPVSENHTEQIDIQLSKQHASRFLQQIMDCHLVHHGEYLNKAKFHPNTLDQSVKAYGEFQTMQASQEVSTIENEVLSRVSEEQLSQVSTSAGDTMEEFLASLEKDLLQDDSRSDFTETYWGDAYNAVKQTGGLPRVNEAHNMSRGGISPASEVGSTVYGGISPASEVGSRSYTAFSPSPVSKRGSIGYGGLSPASEAGGRRCRTFSPASSRFKGP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0664500 | SBH | 0.306136 | 1.073922 | 0.517085 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44350 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0664500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022920 | RBH | 0.0 | 2.872584 | 1.265628 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022980 | RBH | 0.029138 | 0.621788 | 0.708350 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022710 | SBH | 0.100526 | 0.403067 | 0.573230 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022380 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022610 | RBH | 0.0 | 1.171068 | 1.044557 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0399400 | RBH | 0.020891 | 0.0668765 | 0.024756 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023520 | SBH | 0.0 | 0.000000 | 0.019496 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0420100 | RBH | 0.0043385 | 0.0902265 | 0.014144 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023070 | RBH | 0.018341 | 0.027610 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023280 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022860 | SBH | 0.000000 | 2.070718 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022530 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022500 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022760 | RBH | 0.035795 | 0.000000 | 0.239295 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023200 | RBH | 0.157623 | 2.546144 | 0.832399 |
