Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0022540 | OGI:11074690 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:26833021-26837643 | ||||||||
| Gene Symbol | PEX1, OsPEX1 | ||||||||||
| DNA seq | GGAAGCAGACCACATCAAACAACTTTGTTTCTTCGATCTCATGCAAAGAGACAGAATTACATTTCTTCTGTTGAACAAAAGGGATATATATTTATGGATATTGCTACCACAAGGCATGAATCATGAATATGACCTTGTCGTACAGTTTGCTCATGTGCACATCAGCACATACATATGTAACTATCTAGAAGAACCAAGAAAGTATATATTGGATGCATACAAAAAAAAATTGAAGGGGATTAATCGCAATGCGCATGCACTTTAGCCGCTAGAGAAGTGTTTACATACATGCATGCCAGATTCTTTAGCTTTATGGATCACTTCTCATTGATGACGACGTCATCGTCGTCGTTAATCTCTCCATGGAGCTTAGTATCCTTGGAACTGAGGTGGTGGAGGTGAGGCGTACTGGTGCGCCATCATCGGCGGTAAGAGTACAGTAGTGTCGAACGCCGGTGGAGCTTCAGCTTCCATTGCTGGTGGAGGTTTAGATTCCTTTGCAGGTGGAGCTTCAGCTTCCTTTGCTGGTGGCGGCAATGACTCCTGTTTCGGTGGGGGGAGGGAGACCTGCGGAACTGGTGGGGGAAGAGGCTTCACCGCTGGTGGTGGTAGGCTGACTGGTGCTGGTGGGGGAAGAGGCTTCACCGCTGGTGGTGGTAGGCTGACTGGTGCTGGTGGGGGAAGTGACTTCACGACGGGTGGTGGTAGGCTGACCGGTGCTGGTGGGGGAAGCGACTTCACCGCTGGTGGTGGTAGGCTGACCGGTGCCGGTGGGGGAAGAGACTTCACCGCTGGTGGTGACAAGATCACAGGTGCTGCTGGTGGTGGTGACTTCTCTGGAGGTGGTGGCGAGATGACCGGTGCAGGTGGAGGTGGAGACTTCACAGGTGGGGGTGGCAAGATGACTGGTGCGGGAGGAGGTGGAGACTTCACAGGTGGGGGTGGCGAGATGACCGGTGCTGGTGGTGGTGGAGACTTCACAGGAGGAGGTGGCAAGATAACTGGTGCTGGTGGTGGTGGGGACTTAACTGGAGGAGGTGGCGAGATGACTGGAGCCGGTGGGGGAGGAGATTTAATTGGAGGAGGCGGCAAGATCACCGGAGCTGGCGGGGGTGGAGACTTCTCCGGAGGTGGCGGTGAGCTCACAGGAACCGGTGGGGGCAAAGGCTTAACTGTTGGAGGCGGCAAGCTCACTGTAGCCGGTGGAGGAAGAGACTTCTCAGTTGGTGGAGATGAAGCCTTGGGGACTGAGGGAGGAGATGATTCCTCAGGAGTTGATGGCGGGTAAGACTTCTCTGGTGTTTCTGGCGGGCTAATTGGTTCATGTGGAGGTGAAGACTTTGCTGGCGGTGGTTCCGAGGTCACTGGCACTTGCGGCGGTGAAGACTTTGTTGGTGGTGGTTCTGAAATAACCGGTGCGTGTGGTGGTGAAGACTTCACTGGTGGAAGTACTGACTCAACTGGAGATGGCGGTGGCTGGGACTTCTCGGCTAGTGGTGGACTTGATTTCACTGGAGATGGAGGCATGTACTCTTCTTCCGATGGTGGAGAACTATTTATTGTTGGTGTGTGTGGTGGTAGTGGCTTTTCTGGAGGTGGAATTGATTTCGCTGGAGATGGAGGAACGTACTCCTCGTGAGATGGTGGAGAGCTCTTTGGTGTTGGTGACGGTGGTGGTTCTGACTCCTCAGATGGTGGGGATGAGCTCTCCGGAGTATGTGATGGTGGGGACTTCTCTTCTGCAGGTGGAGTTGATTTTGCCGGAGATGGAGGAACGTACTCCTCGTGAGATGGTGGAGAGCTCTTTGGTGTTGGTGTCGGTGGTGGTTCTAACTCCTTAGATGGTGGGGATGAGCTCTCCGGAGTATGTGATGGTGGGGACTTCCCTTCCGGAGGTGGAGAGATCTCCGGTGTTGGCGTTGGTGGAGACTTTGTCTCTGGTGGTGGTGGAGACTTTTCAGGTGGTGGTGGTGGTGAACTAACATGAGCTTCTGGTGGTGGCGAGGAAGATTTTTCTGGTGGTGGTGAGCTAACATGAGCTTCTGGTGGTGGCGAGGAAGATTTTTCTGGTGGTGGTGAGCTAACATGAGCTTCTGGTGGTGGTGAGGAAGATTTCACTGGGGATGGTGGAGTGCCTTCATGACCCGATGGTGGTGATGGAGATTTTTCCGGAGTTGGCGGAGAACTCTCTTCAGCTGGTGTTGGAGGTGACTTCTCCGAGGGAGGTGGAGAAGTTGGGTGAGCCTCTGATGGTGGTGACTTTTCTGGGGAATGTGGTGGAGGAGACTTCTCTTCTGGTGGCGATGACTTTGGTGGGGAAGGTGTGTATTCCTCTGGAGTTGGAGGTGATGTATGCGAGGTCGGCGGTATAGGAGGAGACTTCTCTTCTGGTGGTGATGACTTTGGTGGGGAAGGTGTGTGGCCCTCCGGAGCGGGTGGTGGTGGAGATGAGGCTTCCGACTCAGGCGTGGGAGGAGACTTCTCAACTGGTGGCGTCGACTTTGGCGGGGAAGGCATGTGGCCCTCTGGAGCGGGTGGTGGTGGAGAGGAGGATTCCGACTCAGGTGTAGGAGGAGACTTCTCAGTTGGCGGTGTCGACTTTGGCGGGGAAGGTGTGTGGCCCTCTGGAGTGGGTGGTGGTGGAGATGAGGCTTTCGACTCGGGTGTAGGAGGAGATTTCTCAGATGGTGGTGTCGACTCTGGCGGGGAAGGTGTGTGGCCCTCTGGAGCGGGTGGTGGTGGAGGCGAGGCTTTTGACTCAGGTGTAGGAGGAGACCTCTCAGCTGGTGGTGTCGATTTTGGCGGGGAAGGTGTGTATTCTTCTGGAGTCGGTGGAGGCGAGGCTTTTGACTCAGGTGTAGGAGGAGACTCCCCAGCTGGTGGTCCCGACTTTGGTGGGGAAGGTGTGTGGCCCTCTGGTACCGGTGGTGGCGAGTGCGAGGCCGTCGGCGTAGGAGGGGACTTCCCTTCCGGTGGTGGCGAGCTCTCTGGAGTTGCAGGTGGGGAGTACTCAGTAGGAGGCTCCGCTTGTGGCGGAGGTGCCTTCTTGCGCTCGGGACTCTTGGGGAGCCAACCCGAACTTGGTGGCGGTGGAGCACCATACTCTGCCGGCGGCGATGTCACTCCCTTGATGGCGGGTGCCGGAGGCGGCGCCATCTTGGCCGGTGACTCTGGACTGCTTGGTGTCGGCGACGGTGTTGGTTCCTCGGGTGGTTCCTCAGGTGACTCCTCCTCTGGAGGTGGCGGGCCGTGCGACGTCGGGGTGGAAGGCGCGGCCGGTGGTTCCTCGTAAGCCGGCGATTTCTCCGGCGGCCCCACCGGCACCGGGATGAGCGGCGGCTTCTCCGGCGGCTCCGACGGCTTCCCGGGCGTCGGGTGTCCGGGGCAGACGTGCTTGCTGCAGTCGACGGGGCGGGCGAGCACGGGGGCGCACTGCAGCGTCGTCTTCTGCGCCGGTCGGAGCGCGCCGAGGCAGTTGTCCTTGTCGTCGAGGTTGACCTTGCTGCTCTCCGACGGCATGCACGGCGCCGACTCGGAGTTGAAGAAGTTGTAGGCGAAGCTGAAGTTGACGAGCACGGGGAGCTCGCAGATGGACTCGTGGACGATGCCGGTGAAGACGTTCCTGGACACGTCCAGCTGCTCCAGCTTGCTGCAGTTGGAGAGCGAGGTGGGCAGCGTGCCGACGAGGACGTTGCCGCTGATGTCGATGACGTAGGTGTTCTGCAGGTAGCCCATCTCCATGGGCACGCAGCCGTCGAGCTTGTTGTTCATGAAGCTGATCTCGTCGAGCGTTTTGGCCATGCAGCCGATGCTCTTGGGGATGCAGCCGACGAAGGCGTTGTTGGCGAAGACGATGACGGAGGCGGTGGAGTTGCCGAGGTTGCCCGGGATGTAGCCGACGAATCGGTTGCTGTTGACGAAGATGGCGTCGAGCTCCTTGTCGAACAGCGCCGGCGGCAGCTCGCCCTCGAAGTCGTTGAAGCGGATGTCGAGGTACTTGAGCACGGCCATCTCGAGGCAGACGTGGGGGAAGACGCCGACGAAGCGGTTGTGGCTGACGTCGAACTCGTGCAGCAGCGACAGCCTCGACATGCTCTTGGGGATGATGCCGCAGAAGCGGTTGGTGTTGATGTGGAAGAAGGCGAGGTCGGTGAGGAGGCCGAGCTCCGGCGGGAGGTACCCGGCGATGTCGGCGCCGTTGAGGTCGATGCCGGCGACCACCATGATCTTGGGGTCGTCGATGGCGGCGTAGCAGATGACGCCGTTGTAGGAGCACACGTCGTTGCCCGTCCAGTTGTTGGTGTACCCCTTGGGGTCCGAGTAGAACGCGCGCCGCCACGCCTGGAGCGCGATGTACGCCTTGCGGAGCCGCGGGTTCGGGAAGTCGCCGACGGCGACTCCGACGCGGTCGTCGAAGTCGAAGTCATCGGACGGCAGGTCGCCCTCCTCGCTCACGCCGGCCTCCTTCATCGCCAGCAGCTGCCGGTGCGCGATGTACGACACCTCGGCGCTGGTCACCGCGCCGACGTTGGCGGCGGAGGAGAGGCAGGCGGCGAGGACGGCGAGAATCAGTGCCATGGCGGCGCGGCGCCCGCCGGGGGCGAGGAGGAGCCGGAGGTCCAT
More
|
||||||||||
| CDS seq | ATGGACCTCCGGCTCCTCCTCGCCCCCGGCGGGCGCCGCGCCGCCATGGCACTGATTCTCGCCGTCCTCGCCGCCTGCCTCTCCTCCGCCGCCAACGTCGGCGCGGTGACCAGCGCCGAGGTGTCGTACATCGCGCACCGGCAGCTGCTGGCGATGAAGGAGGCCGGCGTGAGCGAGGAGGGCGACCTGCCGTCCGATGACTTCGACTTCGACGACCGCGTCGGAGTCGCCGTCGGCGACTTCCCGAACCCGCGGCTCCGCAAGGCGTACATCGCGCTCCAGGCGTGGCGGCGCGCGTTCTACTCGGACCCCAAGGGGTACACCAACAACTGGACGGGCAACGACGTGTGCTCCTACAACGGCGTCATCTGCTACGCCGCCATCGACGACCCCAAGATCATGGTGGTCGCCGGCATCGACCTCAACGGCGCCGACATCGCCGGGTACCTCCCGCCGGAGCTCGGCCTCCTCACCGACCTCGCCTTCTTCCACATCAACACCAACCGCTTCTGCGGCATCATCCCCAAGAGCATGTCGAGGCTGTCGCTGCTGCACGAGTTCGACGTCAGCCACAACCGCTTCGTCGGCGTCTTCCCCCACGTCTGCCTCGAGATGGCCGTGCTCAAGTACCTCGACATCCGCTTCAACGACTTCGAGGGCGAGCTGCCGCCGGCGCTGTTCGACAAGGAGCTCGACGCCATCTTCGTCAACAGCAACCGATTCGTCGGCTACATCCCGGGCAACCTCGGCAACTCCACCGCCTCCGTCATCGTCTTCGCCAACAACGCCTTCGTCGGCTGCATCCCCAAGAGCATCGGCTGCATGGCCAAAACGCTCGACGAGATCAGCTTCATGAACAACAAGCTCGACGGCTGCGTGCCCATGGAGATGGGCTACCTGCAGAACACCTACGTCATCGACATCAGCGGCAACGTCCTCGTCGGCACGCTGCCCACCTCGCTCTCCAACTGCAGCAAGCTGGAGCAGCTGGACGTGTCCAGGAACGTCTTCACCGGCATCGTCCACGAGTCCATCTGCGAGCTCCCCGTGCTCGTCAACTTCAGCTTCGCCTACAACTTCTTCAACTCCGAGTCGGCGCCGTGCATGCCGTCGGAGAGCAGCAAGGTCAACCTCGACGACAAGGACAACTGCCTCGGCGCGCTCCGACCGGCGCAGAAGACGACGCTGCAGTGCGCCCCCGTGCTCGCCCGCCCCGTCGACTGCAGCAAGCACGTCTGCCCCGGACACCCGACGCCCGGGAAGCCGTCGGAGCCGCCGGAGAAGCCGCCGCTCATCCCGGTGCCGGTGGGGCCGCCGGAGAAATCGCCGGCTTACGAGGAACCACCGGCCGCGCCTTCCACCCCGACGTCGCACGGCCCGCCACCTCCAGAGGAGGAGTCACCTGAGGAACCACCCGAGGAACCAACACCGTCGCCGACACCAAGCAGTCCAGAGTCACCGGCCAAGATGGCGCCGCCTCCGGCACCCGCCATCAAGGGAGTGACATCGCCGCCGGCAGAGTATGGTGCTCCACCGCCACCAAGTTCGGGTTGGCTCCCCAAGAGTCCCGAGCGCAAGAAGGCACCTCCGCCACAAGCGGAGCCTCCTACTGAGTACTCCCCACCTGCAACTCCAGAGAGCTCGCCACCACCGGAAGGGAAGTCCCCTCCTACGCCGACGGCCTCGCACTCGCCACCACCGGTACCAGAGGGCCACACACCTTCCCCACCAAAGTCGGGACCACCAGCTGGGGAGTCTCCTCCTACACCTGAGTCAAAAGCCTCGCCTCCACCGACTCCAGAAGAATACACACCTTCCCCGCCAAAATCGACACCACCAGCTGAGAGGTCTCCTCCTACACCTGAGTCAAAAGCCTCGCCTCCACCACCACCCGCTCCAGAGGGCCACACACCTTCCCCGCCAGAGTCGACACCACCATCTGAGAAATCTCCTCCTACACCCGAGTCGAAAGCCTCATCTCCACCACCACCCACTCCAGAGGGCCACACACCTTCCCCGCCAAAGTCGACACCGCCAACTGAGAAGTCTCCTCCTACACCTGAGTCGGAATCCTCCTCTCCACCACCACCCGCTCCAGAGGGCCACATGCCTTCCCCGCCAAAGTCGACGCCACCAGTTGAGAAGTCTCCTCCCACGCCTGAGTCGGAAGCCTCATCTCCACCACCACCCGCTCCGGAGGGCCACACACCTTCCCCACCAAAGTCATCACCACCAGAAGAGAAGTCTCCTCCTATACCGCCGACCTCGCATACATCACCTCCAACTCCAGAGGAATACACACCTTCCCCACCAAAGTCATCGCCACCAGAAGAGAAGTCTCCTCCACCACATTCCCCAGAAAAGTCACCACCATCAGAGGCTCACCCAACTTCTCCACCTCCCTCGGAGAAGTCACCTCCAACACCAGCTGAAGAGAGTTCTCCGCCAACTCCGGAAAAATCTCCATCACCACCATCGGGTCATGAAGGCACTCCACCATCCCCAGTGAAATCTTCCTCACCACCACCAGAAGCTCATGTTAGCTCACCACCACCAGAAAAATCTTCCTCGCCACCACCAGAAGCTCATGTTAGCTCACCACCACCAGAAAAATCTTCCTCGCCACCACCAGAAGCTCATGTTAGTTCACCACCACCACCACCTGAAAAGTCTCCACCACCACCAGAGACAAAGTCTCCACCAACGCCAACACCGGAGATCTCTCCACCTCCGGAAGGGAAGTCCCCACCATCACATACTCCGGAGAGCTCATCCCCACCATCTAAGGAGTTAGAACCACCACCGACACCAACACCAAAGAGCTCTCCACCATCTCACGAGGAGTACGTTCCTCCATCTCCGGCAAAATCAACTCCACCTGCAGAAGAGAAGTCCCCACCATCACATACTCCGGAGAGCTCATCCCCACCATCTGAGGAGTCAGAACCACCACCGTCACCAACACCAAAGAGCTCTCCACCATCTCACGAGGAGTACGTTCCTCCATCTCCAGCGAAATCAATTCCACCTCCAGAAAAGCCACTACCACCACACACACCAACAATAAATAGTTCTCCACCATCGGAAGAAGAGTACATGCCTCCATCTCCAGTGAAATCAAGTCCACCACTAGCCGAGAAGTCCCAGCCACCGCCATCTCCAGTTGAGTCAGTACTTCCACCAGTGAAGTCTTCACCACCACACGCACCGGTTATTTCAGAACCACCACCAACAAAGTCTTCACCGCCGCAAGTGCCAGTGACCTCGGAACCACCGCCAGCAAAGTCTTCACCTCCACATGAACCAATTAGCCCGCCAGAAACACCAGAGAAGTCTTACCCGCCATCAACTCCTGAGGAATCATCTCCTCCCTCAGTCCCCAAGGCTTCATCTCCACCAACTGAGAAGTCTCTTCCTCCACCGGCTACAGTGAGCTTGCCGCCTCCAACAGTTAAGCCTTTGCCCCCACCGGTTCCTGTGAGCTCACCGCCACCTCCGGAGAAGTCTCCACCCCCGCCAGCTCCGGTGATCTTGCCGCCTCCTCCAATTAAATCTCCTCCCCCACCGGCTCCAGTCATCTCGCCACCTCCTCCAGTTAAGTCCCCACCACCACCAGCACCAGTTATCTTGCCACCTCCTCCTGTGAAGTCTCCACCACCACCAGCACCGGTCATCTCGCCACCCCCACCTGTGAAGTCTCCACCTCCTCCCGCACCAGTCATCTTGCCACCCCCACCTGTGAAGTCTCCACCTCCACCTGCACCGGTCATCTCGCCACCACCTCCAGAGAAGTCACCACCACCAGCAGCACCTGTGATCTTGTCACCACCAGCGGTGAAGTCTCTTCCCCCACCGGCACCGGTCAGCCTACCACCACCAGCGGTGAAGTCGCTTCCCCCACCAGCACCGGTCAGCCTACCACCACCCGTCGTGAAGTCACTTCCCCCACCAGCACCAGTCAGCCTACCACCACCAGCGGTGAAGCCTCTTCCCCCACCAGCACCAGTCAGCCTACCACCACCAGCGGTGAAGCCTCTTCCCCCACCAGTTCCGCAGGTCTCCCTCCCCCCACCGAAACAGGAGTCATTGCCGCCACCAGCAAAGGAAGCTGAAGCTCCACCTGCAAAGGAATCTAAACCTCCACCAGCAATGGAAGCTGAAGCTCCACCGGCGTTCGACACTACTGTACTCTTACCGCCGATGATGGCGCACCAGTACGCCTCACCTCCACCACCTCAGTTCCAAGGATACTAA
More
|
||||||||||
| Protein seq | MDLRLLLAPGGRRAAMALILAVLAACLSSAANVGAVTSAEVSYIAHRQLLAMKEAGVSEEGDLPSDDFDFDDRVGVAVGDFPNPRLRKAYIALQAWRRAFYSDPKGYTNNWTGNDVCSYNGVICYAAIDDPKIMVVAGIDLNGADIAGYLPPELGLLTDLAFFHINTNRFCGIIPKSMSRLSLLHEFDVSHNRFVGVFPHVCLEMAVLKYLDIRFNDFEGELPPALFDKELDAIFVNSNRFVGYIPGNLGNSTASVIVFANNAFVGCIPKSIGCMAKTLDEISFMNNKLDGCVPMEMGYLQNTYVIDISGNVLVGTLPTSLSNCSKLEQLDVSRNVFTGIVHESICELPVLVNFSFAYNFFNSESAPCMPSESSKVNLDDKDNCLGALRPAQKTTLQCAPVLARPVDCSKHVCPGHPTPGKPSEPPEKPPLIPVPVGPPEKSPAYEEPPAAPSTPTSHGPPPPEEESPEEPPEEPTPSPTPSSPESPAKMAPPPAPAIKGVTSPPAEYGAPPPPSSGWLPKSPERKKAPPPQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAERSPPTPESKASPPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPPPEKSPPPPETKSPPTPTPEISPPPEGKSPPSHTPESSSPPSKELEPPPTPTPKSSPPSHEEYVPPSPAKSTPPAEEKSPPSHTPESSSPPSEESEPPPSPTPKSSPPSHEEYVPPSPAKSIPPPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPLAEKSQPPPSPVESVLPPVKSSPPHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPPAVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPPAPVSLPPPAVKPLPPPVPQVSLPPPKQESLPPPAKEAEAPPAKESKPPPAMEAEAPPAFDTTVLLPPMMAHQYASPPPPQFQGY |
||||||||||
| Function | Pollen-specific leucine-rich repeat extensin-like protein 1 [UniProtKB/Swiss-Prot:Q9LJ64] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0022540 | OsAzu_11g0022540.01 | Chr11 | 26833021 | 26837643 | - | NAM | ||
| CDS seq | ATGGACCTCCGGCTCCTCCTCGCCCCCGGCGGGCGCCGCGCCGCCATGGCACTGATTCTCGCCGTCCTCGCCGCCTGCCTCTCCTCCGCCGCCAACGTCGGCGCGGTGACCAGCGCCGAGGTGTCGTACATCGCGCACCGGCAGCTGCTGGCGATGAAGGAGGCCGGCGTGAGCGAGGAGGGCGACCTGCCGTCCGATGACTTCGACTTCGACGACCGCGTCGGAGTCGCCGTCGGCGACTTCCCGAACCCGCGGCTCCGCAAGGCGTACATCGCGCTCCAGGCGTGGCGGCGCGCGTTCTACTCGGACCCCAAGGGGTACACCAACAACTGGACGGGCAACGACGTGTGCTCCTACAACGGCGTCATCTGCTACGCCGCCATCGACGACCCCAAGATCATGGTGGTCGCCGGCATCGACCTCAACGGCGCCGACATCGCCGGGTACCTCCCGCCGGAGCTCGGCCTCCTCACCGACCTCGCCTTCTTCCACATCAACACCAACCGCTTCTGCGGCATCATCCCCAAGAGCATGTCGAGGCTGTCGCTGCTGCACGAGTTCGACGTCAGCCACAACCGCTTCGTCGGCGTCTTCCCCCACGTCTGCCTCGAGATGGCCGTGCTCAAGTACCTCGACATCCGCTTCAACGACTTCGAGGGCGAGCTGCCGCCGGCGCTGTTCGACAAGGAGCTCGACGCCATCTTCGTCAACAGCAACCGATTCGTCGGCTACATCCCGGGCAACCTCGGCAACTCCACCGCCTCCGTCATCGTCTTCGCCAACAACGCCTTCGTCGGCTGCATCCCCAAGAGCATCGGCTGCATGGCCAAAACGCTCGACGAGATCAGCTTCATGAACAACAAGCTCGACGGCTGCGTGCCCATGGAGATGGGCTACCTGCAGAACACCTACGTCATCGACATCAGCGGCAACGTCCTCGTCGGCACGCTGCCCACCTCGCTCTCCAACTGCAGCAAGCTGGAGCAGCTGGACGTGTCCAGGAACGTCTTCACCGGCATCGTCCACGAGTCCATCTGCGAGCTCCCCGTGCTCGTCAACTTCAGCTTCGCCTACAACTTCTTCAACTCCGAGTCGGCGCCGTGCATGCCGTCGGAGAGCAGCAAGGTCAACCTCGACGACAAGGACAACTGCCTCGGCGCGCTCCGACCGGCGCAGAAGACGACGCTGCAGTGCGCCCCCGTGCTCGCCCGCCCCGTCGACTGCAGCAAGCACGTCTGCCCCGGACACCCGACGCCCGGGAAGCCGTCGGAGCCGCCGGAGAAGCCGCCGCTCATCCCGGTGCCGGTGGGGCCGCCGGAGAAATCGCCGGCTTACGAGGAACCACCGGCCGCGCCTTCCACCCCGACGTCGCACGGCCCGCCACCTCCAGAGGAGGAGTCACCTGAGGAACCACCCGAGGAACCAACACCGTCGCCGACACCAAGCAGTCCAGAGTCACCGGCCAAGATGGCGCCGCCTCCGGCACCCGCCATCAAGGGAGTGACATCGCCGCCGGCAGAGTATGGTGCTCCACCGCCACCAAGTTCGGGTTGGCTCCCCAAGAGTCCCGAGCGCAAGAAGGCACCTCCGCCACAAGCGGAGCCTCCTACTGAGTACTCCCCACCTGCAACTCCAGAGAGCTCGCCACCACCGGAAGGGAAGTCCCCTCCTACGCCGACGGCCTCGCACTCGCCACCACCGGTACCAGAGGGCCACACACCTTCCCCACCAAAGTCGGGACCACCAGCTGGGGAGTCTCCTCCTACACCTGAGTCAAAAGCCTCGCCTCCACCGACTCCAGAAGAATACACACCTTCCCCGCCAAAATCGACACCACCAGCTGAGAGGTCTCCTCCTACACCTGAGTCAAAAGCCTCGCCTCCACCACCACCCGCTCCAGAGGGCCACACACCTTCCCCGCCAGAGTCGACACCACCATCTGAGAAATCTCCTCCTACACCCGAGTCGAAAGCCTCATCTCCACCACCACCCACTCCAGAGGGCCACACACCTTCCCCGCCAAAGTCGACACCGCCAACTGAGAAGTCTCCTCCTACACCTGAGTCGGAATCCTCCTCTCCACCACCACCCGCTCCAGAGGGCCACATGCCTTCCCCGCCAAAGTCGACGCCACCAGTTGAGAAGTCTCCTCCCACGCCTGAGTCGGAAGCCTCATCTCCACCACCACCCGCTCCGGAGGGCCACACACCTTCCCCACCAAAGTCATCACCACCAGAAGAGAAGTCTCCTCCTATACCGCCGACCTCGCATACATCACCTCCAACTCCAGAGGAATACACACCTTCCCCACCAAAGTCATCGCCACCAGAAGAGAAGTCTCCTCCACCACATTCCCCAGAAAAGTCACCACCATCAGAGGCTCACCCAACTTCTCCACCTCCCTCGGAGAAGTCACCTCCAACACCAGCTGAAGAGAGTTCTCCGCCAACTCCGGAAAAATCTCCATCACCACCATCGGGTCATGAAGGCACTCCACCATCCCCAGTGAAATCTTCCTCACCACCACCAGAAGCTCATGTTAGCTCACCACCACCAGAAAAATCTTCCTCGCCACCACCAGAAGCTCATGTTAGCTCACCACCACCAGAAAAATCTTCCTCGCCACCACCAGAAGCTCATGTTAGTTCACCACCACCACCACCTGAAAAGTCTCCACCACCACCAGAGACAAAGTCTCCACCAACGCCAACACCGGAGATCTCTCCACCTCCGGAAGGGAAGTCCCCACCATCACATACTCCGGAGAGCTCATCCCCACCATCTAAGGAGTTAGAACCACCACCGACACCAACACCAAAGAGCTCTCCACCATCTCACGAGGAGTACGTTCCTCCATCTCCGGCAAAATCAACTCCACCTGCAGAAGAGAAGTCCCCACCATCACATACTCCGGAGAGCTCATCCCCACCATCTGAGGAGTCAGAACCACCACCGTCACCAACACCAAAGAGCTCTCCACCATCTCACGAGGAGTACGTTCCTCCATCTCCAGCGAAATCAATTCCACCTCCAGAAAAGCCACTACCACCACACACACCAACAATAAATAGTTCTCCACCATCGGAAGAAGAGTACATGCCTCCATCTCCAGTGAAATCAAGTCCACCACTAGCCGAGAAGTCCCAGCCACCGCCATCTCCAGTTGAGTCAGTACTTCCACCAGTGAAGTCTTCACCACCACACGCACCGGTTATTTCAGAACCACCACCAACAAAGTCTTCACCGCCGCAAGTGCCAGTGACCTCGGAACCACCGCCAGCAAAGTCTTCACCTCCACATGAACCAATTAGCCCGCCAGAAACACCAGAGAAGTCTTACCCGCCATCAACTCCTGAGGAATCATCTCCTCCCTCAGTCCCCAAGGCTTCATCTCCACCAACTGAGAAGTCTCTTCCTCCACCGGCTACAGTGAGCTTGCCGCCTCCAACAGTTAAGCCTTTGCCCCCACCGGTTCCTGTGAGCTCACCGCCACCTCCGGAGAAGTCTCCACCCCCGCCAGCTCCGGTGATCTTGCCGCCTCCTCCAATTAAATCTCCTCCCCCACCGGCTCCAGTCATCTCGCCACCTCCTCCAGTTAAGTCCCCACCACCACCAGCACCAGTTATCTTGCCACCTCCTCCTGTGAAGTCTCCACCACCACCAGCACCGGTCATCTCGCCACCCCCACCTGTGAAGTCTCCACCTCCTCCCGCACCAGTCATCTTGCCACCCCCACCTGTGAAGTCTCCACCTCCACCTGCACCGGTCATCTCGCCACCACCTCCAGAGAAGTCACCACCACCAGCAGCACCTGTGATCTTGTCACCACCAGCGGTGAAGTCTCTTCCCCCACCGGCACCGGTCAGCCTACCACCACCAGCGGTGAAGTCGCTTCCCCCACCAGCACCGGTCAGCCTACCACCACCCGTCGTGAAGTCACTTCCCCCACCAGCACCAGTCAGCCTACCACCACCAGCGGTGAAGCCTCTTCCCCCACCAGCACCAGTCAGCCTACCACCACCAGCGGTGAAGCCTCTTCCCCCACCAGTTCCGCAGGTCTCCCTCCCCCCACCGAAACAGGAGTCATTGCCGCCACCAGCAAAGGAAGCTGAAGCTCCACCTGCAAAGGAATCTAAACCTCCACCAGCAATGGAAGCTGAAGCTCCACCGGCGTTCGACACTACTGTACTCTTACCGCCGATGATGGCGCACCAGTACGCCTCACCTCCACCACCTCAGTTCCAAGGATACTAA
More
|
|||||||
| Protein seq | MDLRLLLAPGGRRAAMALILAVLAACLSSAANVGAVTSAEVSYIAHRQLLAMKEAGVSEEGDLPSDDFDFDDRVGVAVGDFPNPRLRKAYIALQAWRRAFYSDPKGYTNNWTGNDVCSYNGVICYAAIDDPKIMVVAGIDLNGADIAGYLPPELGLLTDLAFFHINTNRFCGIIPKSMSRLSLLHEFDVSHNRFVGVFPHVCLEMAVLKYLDIRFNDFEGELPPALFDKELDAIFVNSNRFVGYIPGNLGNSTASVIVFANNAFVGCIPKSIGCMAKTLDEISFMNNKLDGCVPMEMGYLQNTYVIDISGNVLVGTLPTSLSNCSKLEQLDVSRNVFTGIVHESICELPVLVNFSFAYNFFNSESAPCMPSESSKVNLDDKDNCLGALRPAQKTTLQCAPVLARPVDCSKHVCPGHPTPGKPSEPPEKPPLIPVPVGPPEKSPAYEEPPAAPSTPTSHGPPPPEEESPEEPPEEPTPSPTPSSPESPAKMAPPPAPAIKGVTSPPAEYGAPPPPSSGWLPKSPERKKAPPPQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAERSPPTPESKASPPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPPPEKSPPPPETKSPPTPTPEISPPPEGKSPPSHTPESSSPPSKELEPPPTPTPKSSPPSHEEYVPPSPAKSTPPAEEKSPPSHTPESSSPPSEESEPPPSPTPKSSPPSHEEYVPPSPAKSIPPPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPLAEKSQPPPSPVESVLPPVKSSPPHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPPAVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPPAPVSLPPPAVKPLPPPVPQVSLPPPKQESLPPPAKEAEAPPAKESKPPPAMEAEAPPAFDTTVLLPPMMAHQYASPPPPQFQGY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.020547 | 0.0 | 65.798058 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0657400 | RBH | 0.0 | 0.118353 | 40.299892 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g43640 | RBH | 0.0 | 0.0 | 8.923778 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0657400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022630 | RBH | 0.0 | 0.0 | 90.034645 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022300 | RBH | 0.0 | 0.0 | 219.835281 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021880 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022230 | RBH | 0.0 | 0.0 | 305.914062 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0391400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023160 | RBH | 0.0 | 0.0 | 63.936554 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0414100 | RBH | 0 | 0 | 0.040418 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0022700 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022010 | RBH | 0.0 | 0.0 | 16.574907 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022390 | RBH | 0.0 | 0.0 | 26.741039 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0022860 | RBH | 0.0 | 0.0 | 140.271744 |
