Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0018810 | OGI:11067340 | 13/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:22893255-22894529 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCAGACTAATAAAACTTTCTCTCAGAGGCATGCAACTGCAGAGGTGGACCTCCCTCTGCTCAGTTACGTCGAGGTTTACCTCAACTGCAGAGGTGTGACAGGCAGGCAGGTGGAAGAAGCGAAGGTGGCATTGAGGCAGGTGGAGCGTACTCACCCCAACATTCCTGCCATTCGTGTGTTGCTAGGATGATGAATCGCTTGAAAAATGAACAAAGAGATTCTTGGTGCAAAGGTACGTGTGGTTTTTGTTTGTTAATCATGATAAATCGATTGATTGGTTGATTCCGTTCCTATGCACCTACGCCTTCCCAGTTCAGAATCTGTAACTAATCAGCTTTGTTCTCAGTTAGCGTATTACATGCTCCCTCCGTTTCGAAATATTTGACGCCGTTGAATTTTTAGCACATGTTTGACCGTTCGTCTTATTTAAAAAATTTAAGTAATTATTAATTTTTTTTATCATTTGATTTATTGTTAAATATATTTTTATGTAGGCACATAATTTTATATATTTCACAAAAGTTTTTGAATAAGACGAACGGTTAAACATTTCGAAACAGAGGGAGTATATTCCTCAGTTCATATCCCTCTTTCAATTTCAACTTCAGGAGGAAATGAAACGGGACAAAGATGATGATGATTTAAGTATATTCTGACAAAGAGGTGCTCTACTTGCGCGTGCAAACATGTTTGGTTTTGTTGCTCGGGTTGCGTAATTAATTACCTGGTCTTAATTACTGGCTACTTGTTTGTTTGTGCCTGTTTGAGCTGGACAATGATGCTAGCATCCTGCCCAAGTGGAGGAGGTAATTACTGGCTATCTGTACTCTTTCGTCCCAATGCAATAGTATAAGTGAACGAGTTTTCCCAAACTTGTACCCTGCTGAACTCAAATATATGTTGTTTTATACTTGGGTATAAGAAATAAGAAAACTATCAAATAAAATAACTTTATTGTCTTTCAATTGTATTGTATTGGGAAAGATGAATCGCTTTGTTCAATGTACAAAGCGATTCATCTTTCCCAATGCAATACAATTGAAAGACAATAAAGTTATTTTATTTGATAGTTTTCTTATTTATCTTTCCCAATGCAAAGGGCATGTAGCCTAGTGGTTGCAGTGACCTGAGTAGCACCCAAGTTCCTGAGTTCAAATTTCGATAGGAGCGAATTTCAGATTGGGTTATTTGAGGGCTAAGTTCCCTATTTGATAGGCTAAGTTTCTAAATTAAAATAGCTACATATATCCGGTTGGATATAGAAGCCAGGTAA
More
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| CDS seq | ATGCAGACTAATAAAACTTTCTCTCAGAGGCATGCAACTGCAGAGGTGGACCTCCCTCTGCTCAGTTACGTCGAGGTTTACCTCAACTGCAGAGGTGTGACAGGCAGGCAGGTGGAAGAAGCGAAGGTGGCATTGAGGCAGGTGGAGCGTACTCACCCCAACATTCCTGCCATTCAAGCCAGGTAA |
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| Protein seq | MQTNKTFSQRHATAEVDLPLLSYVEVYLNCRGVTGRQVEEAKVALRQVERTHPNIPAIQAR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0018810 | OsAzu_11g0018810.01 | Chr11 | 22893255 | 22894529 | + | NAM | ||
| CDS seq | ATGCAGACTAATAAAACTTTCTCTCAGAGGCATGCAACTGCAGAGGTGGACCTCCCTCTGCTCAGTTACGTCGAGGTTTACCTCAACTGCAGAGGTGTGACAGGCAGGCAGGTGGAAGAAGCGAAGGTGGCATTGAGGCAGGTGGAGCGTACTCACCCCAACATTCCTGCCATTCAAGCCAGGTAA |
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| Protein seq | MQTNKTFSQRHATAEVDLPLLSYVEVYLNCRGVTGRQVEEAKVALRQVERTHPNIPAIQAR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0588400 | SBH | 0.531363 | 0.225563 | 1.781642 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g37740 | SBH | 0.198322 | 0.151710 | 0.421721 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0588400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0018770 | SBH | 0.0 | 3.054666 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0018960 | SBH | 0.0 | 1.094639 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0018750 | SBH | 0.0 | 8.215183 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0018440 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0018790 | SBH | 0.978046 | 3.226187 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0345000 | SBH | 0.2282045 | 4.6339025 | 0.2718185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0019350 | SBH | 0.0 | 0.000000 | 0.134400 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0356800 | SBH | 1.8868395 | 5.834602 | 6.9888025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0019080 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0019220 | SBH | 0.039728 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0018690 | SBH | 0.0 | 14.356153 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0018470 | SBH | 0.619366 | 0.0 | 0.136617 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0018640 | SBH | 0.0 | 0.736853 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G018800 | SBH | 0.006649 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0018960 | SBH | 0.407940 | 8.649183 | 0.900061 |
