Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0009720 | OGI:11025120 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:8722939-8728201 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAAGCGAATAATTGCTGCTTATTATCTAGCTGATTATAGGGATAAATTATATAGTTTGAGAAATAAAGGTAACAAATAGCTTAAGAAAACATATTTTTCGAAACGAGCAAACAATCCATTTCAATAATCCAGTGAATAATCTAAAAGCATAAGAAGGAAAATGGAAGCCTCGAGCTCTTGCTAACAATAAAGGCAACCTAAAATCCATGGATGGCTAGTTTCAAAATTGTAAAATAAATCAATTAATGGGGAGTGAATTGAAGATCGTCCGGATGTAGGTTTACGAAAGAACCAAACTAGTGCAACAGCATATGCTCGACCGGGGCTTGTAGTTTTGACTAACTATAGGATCAAAACAAGCTATTGAAACCTACTTTTTTTTTTGGGGGGGGGGGGGGGGCTGGAAAAATGGATCACACACTTTGTATCTCAACCCTTCATCTATTTATTATGCCCATGTATAGTGCACACAAGCCACAATTTCTACAATCCTACATCCCTATAAATACAATCCTTCTAGGAATACATTTTATTCCTTACAAATTCGAACTCAAACCTTCCCAAATTCAGACTCCATCTAAATTTGTCTCCTTTTCCATAACTGCACACATCCCTTGTACACCATTTGGGAACTTCACTTTCTTGTGCATTTTATTTAGCCTGAGAATCCTGCATGACCTCGTTGTCTATGTAGACCTCCTATCCCCTCGAGTTTCGCTGTCCACTTAAGCATTTTTTAGATAATGGGCAATGCCTGGCCTCTGCATCATAAGGTGAATGCACATGGCCAAGTTGTCCACTTAAGCATGGAACTAGTATTTACATTGTTCAACACTCAATTTCTAATACCCAATCATTTCACCATGTTAGCATCACAGGTATGGGTTTCCACGATGAAAGATTGATTGAAAGCTCTAATTCCAACAGAAAGGGCCTTGAGGATGGTAGATGTCGCCTACAATGAGGGTGCATAGGTATTTCTTGCAATCACAGAAACTTGCAGTGGAAATCAAAATTGAACGGACAATCCATTGCCACGGCAGACAGTTCGACAACAAATAGTTTCGTTCAATCCGAGAGCAGCTGGACAATCTGATCAAACACAAAGTAAACATGAACTCAACTACTAAATGTACAGACCCAGACTAATCCAGTGCCGGTGCGGACAGTCCAATAGAGCACTCAGTGTCGGGTAAACTGACCACGATCGAATAATCGATCTGGCCCTATACAGAGAATATGAAACATATGGCGAGATTGAGTACTTTGCATAGTAGTTTTAAACTAGAACAAGGAGGTGATCAACAACAGATAAGCATACAACGATATGATCACCAAATAGCTCGATATGCAAGCACTAAGTGCAAAGGGGAGGGGGGCAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGACTGATTTGTTTCCCCAAGTTCAGATCCAACTGAATCTATGTCTCTGCTCTGCTGAGAAGCCTCGAAAGGCCAGGTCTCGATTGACTATATGGATGTTGCCACCGGGATGATGAGGGCATGAGGCAGAGCTCGACGGAGGTATGATTGCTGCCATGACAGAGGTAGGTAGTGGTGATGCTCTAGCAATGGTGAAGACAATAGCAATGTTGGGTCTCCAAGCACAGTAGCAAGACTGGAGGTGCTCTTCATGGTGTGTCATATATGCCTAGTGTTAAAGAAAATTAGACTAGCTTACTACAGATATAGAAGGTGCACGGTTTATTTTTTTTTAAAAAGAAAGCAAATAAATTTCTAACCATTGGATCAAACTAAAATCCTCACTACATATGGACTCAATCTCCTAACCCTCACTACAGGAATTTTGGGCTTCTATGACGATTACATTATGACGATAACAGCTTGTTTCCTGTCACTAACTGCCCGCAGTGACGAAATGGTTGTCATCACAGAAGGTGGGTCACTAACCAGCTTCTGTGACCACCAGAGGACATCGTCATTGATACAGTGACGATAGTTCTCCTGTCATTGATGAATGACGAGACAAATTCGTCATAACAAATTGAACTGAATAACGCCACGTGTACGATGACATGTGATGTTGCAGATGACAAGGCGGGTGATATGGCAAATGACGTGGCAATTCACATTCAGCCCATATAGCATGGGCTTGTTTATTTTCAATTACAATTGGCCCAAATATTTTTTTTTGACCCAGCTACAAATTTGCTTTTACGTTTTTTTTTCATTATAGCCCAACAGTACAATTCTAGCCCATATTATGGGCCAGCCCAATTAAAAAGCAATCACAGAATATAAATCATAGCCAGTTGCATAATTATATTATAATCACATTCCAGCCATAATTAATTTTCCAGCCCATACAAAAGCAAGTTCCAGAATACAGTTTCCAACATGTTCCATACAAAAGCACAAAACATGAATACAAAATGATCCATCCACCATCCAACTACACAAGTACCCGTGCCTTCAATCTTTCAAGCTCCTCCTGAAGTACTGCAGACTCTAGCTTCTTTGCATCTAGTTCAACTTGTATCTCTTTCATCACATTGGTTGTCTTGGCAGCGAGCTGCTAAATTCCGACGTTGCGCAAAAATGTGTTCGACTTCCGCAGCACTTTGGAAACAGCTTCAATAGAAGTCTTAGCTGGCTGCCCATCTTCTACTGATGGTGAAGTGAGGACTTCCCGGGCATGCATATCCTCCTAGCAATCAAAGCAAGGTTTCAGTTTTGCATTATTATATAAATAAAGGTTCATTGCATAAGGTACTTAATAAAAGAAGGAAAGAAGAAGTAATAGTTTAGTACTTACTATAGCTTTCTTCTCAGGTTCACTAAAACATTTAGTTTTGCTGCAATGCAACTCCTTAAAGAGATCAATTGCAGTGGGCTAACTGTCAATTGCAGTGCCCATGGTCTTCCCCCCTTGGCTCCACTTGTCTACTGCCAGTGAGGGTGCCTAACATAAAACATTTACAGGTGTCAATAAAAAGATCCTGCACTTGATATGAATGAAGCATAGCACATATAAAGACAAAAGAACAAGAATCCAAGTTACTTGCCTTGTTCAGTAGTGCTCAATTCCATTGGCTCCAGTTCTGTACTTAAAGTGCGGTTGCTCAATCCCATTGCCGCCGCCCAATATGGCCACCCAGGGCAAAGGCCCTGTCTGTGGCGCGAGAAGGAAGGGTTGAGGATGATGGCCGGCTGCGGCACGCCCTGGTTAGGGCTCCACCCGCCGATGCTCACCAGTGCCACCTGATCTTGCAGTCCCGAGGCCCTCATTCCTGTAGTCACATTCTGCAACACAGATGAAGAAAGGATCAGAAGAAAGGATCACAACATTGCATTAGAGTTGCAGAAGCTTCTGACTAGTAACCGGTTTTGCTAGGCAAATCTGTTAGTTGAGTAGGGTTTTAAGGAACATGATTTTAAGGAACATGTACTCTTTGAGAAAGTTTATAGCCAATTTAGTAAAAATCTCACATCTTATTTACATTCTTAAAGGGATATTTCTGTGACAAACATTATATTGGATTACAGAAGGAGTCAGAGAGATGCTAGCCATGACCTTTCTTCTCAGGAGGTGATGCTTCCCTTTTACCAGTGACATTTTCAGCTTTATGAATTACAGACTGAGGTGGAGATGCAGTAGTAGCTTCCCTTCCTACTTCTTCTACTGACTGCACTAAAGGATCCAAGCTAGAAAAAAATTCTTCCTTGGAGATATCATGATCTATATACTTGGGTTAATTAAACTGAGTTCAGATTAATGCTACCACACCTAATATTAACAAAAAAAAAGCTAGAAAAAATTTCTTCCTTGGAGATATCATGATCTATATACTTGGATTAAACTGAGTTCAGATTAATGCTACCACACCTAACATTAACAAAAAAAAAGGTGTTTGTTTTCAAGAAGAATGCATGTGGTAAGTTTGGTACATAGTAGAGATCAAAGCAGTAAACAACAGCTCTGATCGGTTGGGCAGGCATAAACATCTTCATAACTATAATTAGTTAACCATGCATTTTTCTTGAAAGAACTTATCAGGAAGCCCATTGCAAAACAGAAAGCCCAAAAGCTGTGCCATCAAATTCCACCCTTTGGTTCAGTTAGTTAATTTCCTTGGATGGATTGCTCACTTGTCCAAGCTATGAACCTCAAGTCAATTTGAGTTATGATCCTCAAGTCAATTTGAGTTGTGGCGATGCCTCCAATTCACTCATGAATTATGATAAAAGTAATTAGGTCCACCTGTACCAGTAAAGCACCTGTTCTAGTGACTATACGATCAGAAGAACAAGCTAAGCAAACAAACCCAGTGTACTTAAACTTAACAGCGCATTCGAATTTAGCAGAAAACAAGGGTCAGATTTTTGTCATGGGTGTGCCCACATGTCATAGTATAGTTGAGTCAAATAAAAAACTTGTTCACAATAATATAATCAATCATTCCTAATTGCAGCGCTTCATTTTTACTCATTGCTAATTGAACCAGGAAGTAAAGACACATGATCTCAATTCTCTGCATACAAATCACAAAAATATGCCTTGAACTGAACTGAGTTTACTCATTCTAGGTTTCAACTTTTCAATTAATCTCACTCTGCTAAGAGAAAAACCAAACCAGAGAGAGATCCTAGAAATACTCACTGAATATACCAGCCGTCAGCCGTGCACATGGACAGATGAGTGAATGACGCTTGGAGCTAGACCTTTGGTTGGCATTCCGGCGCAACCATTGCTGGTCCAGTGCTCCTGGTTGCCGACTCGCTGGCCGCCGCGACGGCGTACAGATCCTGTGCTGAGGCGCCGACGCGTCGCTGGCCCGTTGCCATGCACCCCTGCCCCGCGCCGGCGCGCCCCCGCGGCCCCACACCACCTGCCCGCCTCGCGATTGCAAGTCGCCGGCCGCCGCTGGTCATCATCATCGTCGTCATCGCAGCTACCGTCGCAGCTGTCGCCGTCGTCGTCGTCGTTGCAGCCACCATCGCCGTCGTTGCCGCAGCCGCCGCCACCGTAGCCGCTCGCTTCCGCCTTCCTAAGCCCTCCGCCGTTGCTCCGGAGGGCGAAGGCAGGCGGATCCGCGTGCTGCCGGTGCTCCCACTCACGCCAGGCCGCTCCCGAGGACGGAGGCCGCTGGATTCATGCGCTGCCGTCGCTCCCGAGGACGGGAGGCGGCGGATCCGCGCGCCACCATCCTTCCCTGGGTGGGGGTGTGAGGCGGGG
More
|
||||||||||
| CDS seq | ATGCCAACCAAAGGTCTAGCTCCAAGCGTCATTCACTCATCTGTCCATAATGTGACTACAGGAATGAGGGCCTCGGGACTGCAAGATCAGGTGGCACTGGTGAGCATCGGCGGGTGGAGCCCTAACCAGGGCGTGCCGCAGCCGGCCATCATCCTCAACCCTTCCTTCTCGCGCCACAGACAGGGCCTTTGCCCTGGGTGGCCATATTGGGCGGCGGCAATGGGATTGAGCAACCGCACTTTAAGTACAGAACTGGAGCCAATGGAATTGAGCACTACTGAACAAGGCAACAAAACTAAATGTTTTAGTGAACCTGAGAAGAAAGCTATAGAGGATATGCATGCCCGGGAAGTCCTCACTTCACCATCAGTAGAAGATGGGCAGCCAGCTAAGACTTCTATTGAAGCTGTTTCCAAAGTGCTGCGGAAGTCGAACACATTTTTGCGCAACCTCGCTGCCAAGACAACCAATGTGATGAAAGAGATACAAGTTGAACTAGATGCAAAGAAGCTAGAGTCTGCAGTACTTCAGGAGGAGCTTGAAAGATTGAAGGCACGGCTAGATAATAAGCAGCAATTATTCGCTTAA
More
|
||||||||||
| Protein seq | MPTKGLAPSVIHSSVHNVTTGMRASGLQDQVALVSIGGWSPNQGVPQPAIILNPSFSRHRQGLCPGWPYWAAAMGLSNRTLSTELEPMELSTTEQGNKTKCFSEPEKKAIEDMHAREVLTSPSVEDGQPAKTSIEAVSKVLRKSNTFLRNLAAKTTNVMKEIQVELDAKKLESAVLQEELERLKARLDNKQQLFA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0009720 | OsAzu_11g0009720.01 | Chr11 | 8722939 | 8727700 | - | NAM | ||
| CDS seq | ATGCCAACCAAAGGTCTAGCTCCAAGCGTCATTCACTCATCTGTCCATAATGTGACTACAGGAATGAGGGCCTCGGGACTGCAAGATCAGGTGGCACTGGTGAGCATCGGCGGGTGGAGCCCTAACCAGGGCGTGCCGCAGCCGGCCATCATCCTCAACCCTTCCTTCTCGCGCCACAGACAGGGCCTTTGCCCTGGGTGGCCATATTGGGCGGCGGCAATGGGATTGAGCAACCGCACTTTAAGTACAGAACTGGAGCCAATGGAATTGAGCACTACTGAACAAGGCAACAAAACTAAATGTTTTAGTGAACCTGAGAAGAAAGCTATAGAGGATATGCATGCCCGGGAAGTCCTCACTTCACCATCAGTAGAAGATGGGCAGCCAGCTAAGACTTCTATTGAAGCTGTTTCCAAAGTGCTGCGGAAGTCGAACACATTTTTGCGCAACCTCGCTGCCAAGACAACCAATGTGATGAAAGAGATACAAGTTGAACTAGATGCAAAGAAGCTAGAGTCTGCAGTACTTCAGGAGGAGCTTGAAAGATTGAAGGCACGGCTAGATAATAAGCAGCAATTATTCGCTTAA
More
|
|||||||
| Protein seq | MPTKGLAPSVIHSSVHNVTTGMRASGLQDQVALVSIGGWSPNQGVPQPAIILNPSFSRHRQGLCPGWPYWAAAMGLSNRTLSTELEPMELSTTEQGNKTKCFSEPEKKAIEDMHAREVLTSPSVEDGQPAKTSIEAVSKVLRKSNTFLRNLAAKTTNVMKEIQVELDAKKLESAVLQEELERLKARLDNKQQLFA |
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0009720 | OsAzu_11g0009720.02 | Chr11 | 8725259 | 8728201 | - | IsoSeq | ||
| CDS seq | CCCGCCTCACACCCCCACCCAGGGAAGGATGGTGGCGCGCGGATCCGCCGCCTCCCGTCCTCGGGAGCGACGGCAGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGCGGCCTGGCGTGAGTGGGAGCACCGGCAGCACGCGGATCCGCCTGCCTTCGCCCTCCGGAGCAACGGCGGAGGGCTTAGGAAGGCGGAAGCGAGCGGCTACGGTGGCGGCGGCTGCGGCAACGACGGCGATGGTGGCTGCAACGACGACGACGACGGCGACAGCTGCGACGGTAGCTGCGATGACGACGATGATGATGACCAGCGGCGGCCGGCGACTTGCAATCGCGAGGCGGGCAGGTGGTGTGGGGCCGCGGGGGCGCGCCGGCGCGGGGCAGGGGTGCATGGCAACGGGCCAGCGACGCGTCGGCGCCTCAGCACAGGATCTGTACGCCGTCGCGGCGGCCAGCGAGTCGGCAACCAGGAGCACTGGACCAGCAATGGTTGCGCCGGAATGCCAACCAAAG
More
|
|||||||
| Protein seq | PASHPHPGKDGGARIRRLPSSGATAAHESSGLRPRERPGVSGSTGSTRIRLPSPSGATAEGLGRRKRAATVAAAAATTAMVAATTTTTATAATVAAMTTMMMTSGGRRLAIARRAGGVGPRGRAGAGQGCMATGQRRVGASAQDLYAVAAASESATRSTGPAMVAPECQPK |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr11 | 8726268 | 8727653 | - | OsAzu_11g0009720.02 | OsAzu_11g0009720.02,OsAzu_11g0009720.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.296893 | 16.935848 | 20.478062 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0361000 | SBH | 11.691644 | 10.265623 | 4.149907 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g15590 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0361000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0009390 | SBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0009600 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0009600 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0009430 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0009420 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0132200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0009160 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0136800 | SBH | 0 | 0 | 0.01146 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0009230 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0009610 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0009550 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0009440 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0009580 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G009700 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0009150 | SBH | 0.0 | 0.0 | 0.0 |
