Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0007950 | OGI:11019690 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:6632227-6638996 | ||||||||
| Gene Symbol | Os11gRGA4, - | ||||||||||
| DNA seq | CAGGCATATCATATTCACCATTTCACATCCATCTAATATTGGAGTCAAGTCAACTATTGCCAAGTTGTACTGCTGATGCTTCATTTCAGCTCCTGCTTACCCAGTATTCACACCCCCCCCCCCCCTTCTCTTCCCTGGAGAAGAAATCCGTTCATCTCCTCTGCCCTGCTGCGTCCTTTGGTTGTTGTGTGAGCAGCAGCTAGCACCTCTGCAGCTGCAAAGCTTCTCCAGGTTAGTGCATTCAAAAGCTGCTTCTGTTCAAAGGCTAAGAAACATTACACCGTTCTTTACTTCTTTAGGTATGTCCATGTGTGTGTGTGTTTTGAGGAAAGCTCATCCTGACTCAGTATGTGAGAAACCCTTGTTTTTATTTGAATTTGAAAGCTTGTTAGTTTGAATAACAGTAATATGAATTATGAAACACCAGTTAGCAACAATATATCACAAAAGCCATACTGACTACTCAATGCTAGTGCATTCAAAAGTTGTTTCTGTTCAATATCTGTGAGACTAATATTTATGAACTACGAAACACCAGCTAGCAACAATATCAGAAAAGCCATACTGACTACTGAAGCATGAAGGGTACTCAGAAGCAGCTTTCACATAATACTGAGAAATCATATATTTCTATGTCTCAAACAATTGTAATTTTTTTCTCTGTTTTCTTAGCTTTGTGTTATTTTGCTTGTGACTCTAGTTTTCTATTATTGGGTTAGTGCTCAATAATCAGAAATGGAAATACCGACACCTGAGCTATCATCACAATTTCTGAAGGAAATCACTAATGAGTTCTCTGATGAGCGAAAAGTTGGTGAAGGTGCATTTGGAATAGTGTATAAGGTAAGATTTTTGTAGTTTTAGGGCCTGTTCACTTTGATGCCATTTTCAGCCACACATTTTTTTTTTTGCAAAGTTGCTAAAAAATGTATGTTTGTTGCCAAATTTGGTAAATACATAAGAAATCCTGCCAAAATTTTGGCAATATTGCCATCTTACCAAAATTTTGTAAGGTTTATTTTGGCTACAATCTGAACAGGCCCTTATTCTCAGCATTTTCAAAAGTTCACAGAAAAGATGTCAATTTTGTATGGGGGACTTAACAGGGAATGCTTAAAGATGGGACAGAAATTGCTGCGAAGAAGCTTCGGGAAACATCACCGATTCATGACAATCAATTTAAAAATGAGGTTGGGAGTCTTATGAAGGTCAACCACAGAAATATAGTCAAGTTAATTGGCTACTGTTATGAAATACAAAAGAAGGTGGTGGAGCATAATGGAAAATATATTCTTACAGAGGCAGTAGAAAAACTGCTGTGCTATGAATATATATCTAATGGAAGCCTTGACAAACACCTTTTCGGTATGATAATGCAATACCTAAATATTTCCAGTCATTTTCCCTGTTTGCAATGTTTACAAGATTTAGATATTAGCATGATGTAGCCTACTCTAGGTTCTACTGAAGTATACAATAAGTCAAAAAGGTAAGAAGATCAAGCTCTCACTAGGTTGTGGGCTCATGAAAATTCCTTGTGTTTTTTGGCAATTAGTAAGTAATACGATTAATCCTAATGTTATTTGTTTTCCATAATTGCTTCTTCAGGTGAATCAAGTCGACTTGATTGGCACACACGCTTCAATATAATTAAGGGGGTTTGTGAGGGTTTGCATTTCCTACACAAAGGATCAGAAAGACCTATTATTCATTTGGATATTAAACCTAGCAACATACTATTGGATGACAACATGGTGCCAAAAATTGCAGATTTTGGTCTATCAAGGCTCTTGGGTGAAGAACAAACCAGAGTTTGCACACAAAATGTCATGGGAGCAATGTAAGTCACCAAACACATTCCAATGTCTATTGTTTTGTAGTTTTCCTACAAGGTGAATTTCATTTGCATTAGTCACATAATCCTCCAACTATTGATGCTGATATTATACAGAGGATACATGGCACCGGAATATTTATATCGAGGTGAAATCTCCACTCAATCAGATATATACAGTTTAGGTCTTCTAATTATCGAGATCACAACAGGGGAGAAAAACTTCCCCAATAGAGAGGACATCATTGCTAAGAACTTCATTGAGAATGTAAGGCAAAAATAATGACTGTACCAGTTTTAGAACAAATTTACTGTTTTCATACTAAGGAGTTCTTTTAGAATAATGTTATATATAAGTTTGTGTGCTGTCGTTGTTTATAGGTACGCCGAAATCGGACCAATATTGTGCATATATCACTGAAGTACCCATCGTTAGACACAAATTGCCTCCAGCAGGTAAAGACATGCATTGAAATTGGACTGAGCTGTGTTCAGACCAACCGGAAGGACAGGCCTTCTATAGGGGAAATTGTCAATATGCTCAGTTGAGGAGCACCATACTCCCTTGTAGACAAGGTATGGCTATAATTCAAGCTAAAAATGTATAATTGCATTGACATTGTTCTGGTTCTAACATCCTATTTAAAATACCAGATCTCTCCCTTTCCAACATGGTCGTCAGTTTGGGAGAGGCACTGGAGCAACCGAGATGTATGAGCCTTATCATTTATGCTTCTTAGCTACAAGAAATAAGATCCTATGAAAGAGATTCTCATCTCGAAATAAATGTTCTTACAGATTCCATCTCCTTTTGTACTTGTAATCATGATATAACAAAATATTGGAGAAAACATTGTTTCCACTCTCCAATCATGTGTTCGACACAGAAAATTATAAGTTTTATTCAATTCCTCTTTGATGATACAACAGGGAACTGAACTCTCGTTGCTATAACACTCCGCACCTCATGCTTCGTTTTTTTAACAAATTTTGTATTTGTGTTCACATTCAATGTTGTCATTTTTTTGAACCAAACAAAGTGCAAAACCATTCCATTCGTCAAATCATTCCATCCATCAAAGCATCATCCCATACTAGGCCATTCCATCATGATTTCACTGCGCTCCTCAAACCAAAACCATCATAAATATACTCAGGACAAACAATAGACTTAAAAATAAAGGATTATCAAACGGCCGAATTCCCTATCAGGTGGATTCTATAGACAACATATTCTGAGGGCAGCCAGTTAGAACCAAGATTTATTACAACCTGTTGCTCTGCCAAACAGGATGGAGACAAAACAAGTACTAGGTATGCCACGTCACTATACAAAATGCAGACAGAACATGTAGCTGTGCCCATGAATCCCCCTGATTTCATCAAGGGAGGTAACAGGGAGTGTAGGAAATCAAAGGTATTTTGATGACGATGATTGTGTGAAGGACAAGTAAACACAAAATGCACAATCAGAAAGCAACAGGTCCAAATAACTGACCGGGAAGCCACGTGAAGATTCTAGATCCTTGTCATGTACAAGAAGGCACCATGCCATTCGGCAGCTCACTCACAGCAGGAGAGACATCTGAAAGCCCCATATTGTTGAAAGAATAATGCAGTTGATCTTTTGAGCTTGATTGGTCTGCAAAATTGTTTTGTTTGTTCAGCACAGAAGAGGATTCCAATCCATGGTCAAGTTGCATTTTGTTGTTCATGTCAATCACTTGTTCTGGTTCCTCTGGTGCAATAGAATATTCTGTAGTCTCACTTTTGACTGCCTCCATTACACTATCAACGTCTGTATGTTCACTTTCTGCTGTATCAACAGATTTGAGAAGCAATACTTTTGGCCTATTCGGATGCTCCTTAGCAGCCTTTACCCATTCCTGTCTTGTAGCTGGAGTGACTCCAGAATGAAGAGTTACCTCCTGAAGATGTTTAAAACATTCAATTTTGATGTCAGAAAGGCCATGTAGATCTTTGCATAGCAGCTGAAGTGTGACAAGAAATGGCAGAGCTCCTTCTTCAATTACTGGGAATGTTGGACATTGTAGCACAATACAAAGGCATAGCAGCCTGGGGAACCCCTGAACTTTTATGATGAACTTCTCAAGTTCATCGGCAACCAGTTTGAGATACTGCAAGTAGCTCAAATTACTCAAGGCTTCAAGAAGGCCTGTTGTAAATTTAGTAGATGAAAGGCAAAGCTCCTTGAGACCACGAAGTGATGTAACAAACTGAGGCAATTGGGGGAAGTTGCCATGTAATTTCAACGAGCTGAGGTAGCAGGGTTCTTTTAAGGAATTTATCGCATCTTCAGAGCATCCAGTGAAATGAAGCGATAAAGAACGGGTACCAATATTTGCTTCCTTTTCATCCAGAATGAACTGTTGAATGGCCTCCCTAAGATCAGTCCAATCGGTGCTACCTGCAGACGACGTACACCAAATCTTCAACTTTCTCAACTTATTCATGTACCTCATAAGATGCAGAAACCCTTCGCTTCCGTTGCTAGCAAATCCTGCTAGCGTCTGCAAGTTGCTTTTTCCTTTCGAGAGAAACTCTTGCACTTCAGTCTTCTGCTTGACTTTATCTGAGAGCTTAAATTTTCCAAGCAGATGAATTAGGCATGGCAACCCGAAGACTTCTACCGGCATTATCTTTACTTTCGATCTCCTTACATCGAGTGCCTCCAAATCTTTCAATTTGGCAATATCCTTTGGAAGTTTGGAGATATTACCCCCAAGGCTCAGATATTTCAGAAGCACCAGATTGCATATTTCTTTGAGATGATCATCGTTCAAATCATCACATTTTTCAAGATCTAAAACTCGCAGCAATTGATACTTGCTGAAGTCTAATACAGTTGTACCTGCCTCCCCAAAGACTACCAGAGACCGTACAAGTGATAAATCAATACCGTTGAAGTTATCGCCATTCACAACAGTGTCACCATGGAGAGAAAGCCGACGAACATATTTGGGCAGGAACTTGTCATCACAGAAAAAGGTGACAAAGTTCTGAGAGATTGACATATGCGATATGAATTCACGCATCATACCGTACGTTTGGCATGTCTTGACTTTATCATTATTGCTTACATTGATGGGCTCAATAATGTTCCGGTCCATTAGCACATCGAAAGCAGCCGTGGAATCTAGGTTACTAGATGAAGACACTGGTTCTACAAATCCCTCGGCCAGCCATCGCCTCAACAGACTTTTCCTCCTGATTGGATGATCAGATGGGAACATACCAAAATATAGTAAGCAGGCCTTGAGAGCATGGCCAGGTAGACTAGTGTAGTTGCGGACCAGCACTCGCCGCATCCTTTCAAGTGTTTTATCATTCTCTAGGTGATAATGTAGCCGATTGCAGAGATCTTCACAGTTAGGCCCCGTTGGCCAGCCATTAGCTTGCAGGAATTCACCTATGGTAACAAGAGCAAGTGGCTGGCCATCACATTTCTTCAAAATTGCTGCTGAATCTGGCTGCTTGTAATGTGAATACCTCTCTGGGCAAGCTTTCTTGGACAACAATTGCTTTGAGCAGTTCTTATCAAGCCTGCTCATTTTGTGCAAATACCCATTCGCAGAACAGCAGGCATTAGCTACTGACTGGATGGTCGTCGTGACCACTATTCTGCTGCCAATATCCTTATCAGTCGGAAAAGCCGATTTGATGCTTTTCCACTGATCTTCTGTTTGAATGTCATCGATAACAATGAAGTACCTGCAAGACGAGGCAGATCAAGAAAGAATAATTGTAAACATCCCCATCTGGAGCCACAGTAATCAACAAATTGAAACGAATAATTTGTATAATTTCATACGGTAGAGCAATTTAGAAGCAGTGAATTGTTTTTTCCATTTTTATTCTATTATAGTAAATTTGTAAAAGATAAAGCGCATGAGAAATGCACTGTATGCATTTGATGACTAAATTAGTGCAGCTAACACCTAGCAGTTAGCAAGATATAGTATCTGTTCATGATTCACTTTGCTATTGAAAGTGTCAGTCGCACTGAACTTGTGCAAAAGAACAGGCGAGTTGACTAAAATGTTGACCTCAAATTCATGTGAAAAATGGATCAGGCAATTCAAGCAGAAAGTTGAGATTTTTCACCTCTTCTTCTCCAACTGTTGTCTGATATCTACACACAGCTGGCCAGCATCGGAGTCCCCATGGCAAGCGGCGTCAATCCTGCGGAGCAATTCGCCGAGCACCTCCCGTGCACTCCGGTGCGCGGCGCAAACCCACGCGTGCCTCTCGAATCTCCCGCCGCGGGTCTCTCGGTTGTACGCCTCCGCGGCGAGGGCGGTCTTCCCCAGCCCGCAGAACCCGACGATGGCGATCACCTTGAGCTGCTCCGGCTGCCGCTCCGCCAGCTGCTCAAGGAGCTCCGCCCGGTCCGCGTCGACGCCGACCAGGTCCGCCTCGTGGATGCGCGGATCTGAGGCAGATGAGCACGACGGCCACGGCTCATCCACCTGCGCCGCAGCCGATGAGTAGACCTGACCGTGTTGACCGGGCGCCGCCGCCGTGTACCTCTGCTTCCGCTGGTTCGCCTCCTCCACCATCCTCTTCAGCCGCTGCAACTCCTGGGCCAGATGCTGGTTTGTCTGTAGCAACTTCTTGGTTGCCCGGACCGTGCGGGGGAGAAGCGACGAAGAGCGCCGCTGCTCCCTGGCGGCGCGGTACAGGACGCCGTCGATGCAGTCCTCGATGCCGTGGGCGAGCTCGCGGAGGTCCTCCATGCATAGCGTCTGTACGGCGGCGGCGGCGGCGGCGGCGCCATGTTCGACGGAGAGGTCGTCGTCGATGGCGCCGACGATCATGCGGAGCTCCTTGATGAGGAAATCGATGTCGCCCTTGACGCCCTTGTGCAGATTGAGCTTGTCGTTGACGAGGGAGAAGAGCCTCGGCAGGATGGCCT
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| CDS seq | ATGATCGTCGGCGCCATCGACGACGACCTCTCCGTCGAACATGGCGCCGCCGCCGCCGCCGCCGCCGTACAGACGCTATGCATGGAGGACCTCCGCGAGCTCGCCCACGGCATCGAGGACTGCATCGACGGCGTCCTGTACCGCGCCGCCAGGGAGCAGCGGCGCTCTTCGTCGCTTCTCCCCCGCACGGTCCGGGCAACCAAGAAGTTGCTACAGACAAACCAGCATCTGGCCCAGGAGTTGCAGCGGCTGAAGAGGATGGTGGAGGAGGCGAACCAGCGGAAGCAGAGGTACACGGCGGCGGCGCCCGGTCAACACGGTCAGGTCTACTCATCGGCTGCGGCGCAGGTGGATGAGCCGTGGCCGTCGTGCTCATCTGCCTCAGATCCGCGCATCCACGAGGCGGACCTGGTCGGCGTCGACGCGGACCGGGCGGAGCTCCTTGAGCAGCTGGCGGAGCGGCAGCCGGAGCAGCTCAAGGTGATCGCCATCGTCGGGTTCTGCGGGCTGGGGAAGACCGCCCTCGCCGCGGAGGCGTACAACCGAGAGACCCGCGGCGGGAGATTCGAGAGGCACGCGTGGGTTTGCGCCGCGCACCGGAGTGCACGGGAGGTGCTCGGCGAATTGCTCCGCAGGATTGACGCCGCTTGCCATGGGGACTCCGATGCTGGCCAGCTGTGTGTAGATATCAGACAACAGTTGGAGAAGAAGAGGTACTTCATTGTTATCGATGACATTCAAACAGAAGATCAGTGGAAAAGCATCAAATCGGCTTTTCCGACTGATAAGGATATTGGCAGCAGAATAGTGGTCACGACGACCATCCAGTCAGTAGCTAATGCCTGCTGTTCTGCGAATGGGTATTTGCACAAAATGAGCAGGCTTGATAAGAACTGCTCAAAGCAATTGTTGTCCAAGAAAGCTTGCCCAGAGAGGTATTCACATTACAAGCAGCCAGATTCAGCAGCAATTTTGAAGAAATGTGATGGCCAGCCACTTGCTCTTGTTACCATAGGTGAATTCCTGCAAGCTAATGGCTGGCCAACGGGGCCTAACTGTGAAGATCTCTGCAATCGGCTACATTATCACCTAGAGAATGATAAAACACTTGAAAGGATGCGGCGAGTGCTGGTCCGCAACTACACTAGTCTACCTGGCCATGCTCTCAAGGCCTGCTTACTATATTTTGGTATGTTCCCATCTGATCATCCAATCAGGAGGAAAAGTCTGTTGAGGCGATGGCTGGCCGAGGGATTTGTAGAACCAGTGTCTTCATCTAGTAACCTAGATTCCACGGCTGCTTTCGATGTGCTAATGGACCGGAACATTATTGAGCCCATCAATGTAAGCAATAATGATAAAGTCAAGACATGCCAAACGTACGGTATGATGCGTGAATTCATATCGCATATGTCAATCTCTCAGAACTTTGTCACCTTTTTCTGTGATGACAAGTTCCTGCCCAAATATGTTCGTCGGCTTTCTCTCCATGGTGACACTGTTGTGAATGGCGATAACTTCAACGGTATTGATTTATCACTTGTACGGTCTCTGGTAGTCTTTGGGGAGGCAGGTACAACTGTATTAGACTTCAGCAAGTATCAATTGCTGCGAGTTTTAGATCTTGAAAAATGTGATGATTTGAACGATGATCATCTCAAAGAAATATGCAATCTGGTGCTTCTGAAATATCTGAGCCTTGGGGGTAATATCTCCAAACTTCCAAAGGATATTGCCAAATTGAAAGATTTGGAGGCACTCGATGTAAGGAGATCGAAAGTAAAGATAATGCCGGTAGAAGTCTTCGGGTTGCCATGCCTAATTCATCTGCTTGGAAAATTTAAGCTCTCAGATAAAGTCAAGCAGAAGACTGAAGTGCAAGAGTTTCTCTCGAAAGGAAAAAGCAACTTGCAGACGCTAGCAGGATTTGCTAGCAACGGAAGCGAAGGGTTTCTGCATCTTATGAGGTACATGAATAAGTTGAGAAAGTTGAAGATTTGGTGTACGTCGTCTGCAGGTAGCACCGATTGGACTGATCTTAGGGAGGCCATTCAACAGTTCATTCTGGATGAAAAGGAAGCAAATATTGGTACCCGTTCTTTATCGCTTCATTTCACTGGATGCTCTGAAGATGCGATAAATTCCTTAAAAGAACCCTGCTACCTCAGCTCGTTGAAATTACATGGCAACTTCCCCCAATTGCCTCAGTTTGTTACATCACTTCGTGGTCTCAAGGAGCTTTGCCTTTCATCTACTAAATTTACAACAGGCCTTCTTGAAGCCTTGAGTAATTTGAGCTACTTGCAGTATCTCAAACTGGTTGCCGATGAACTTGAGAAGTTCATCATAAAAGTTCAGGGGTTCCCCAGGCTGCTATGCCTTTGTATTGTGCTACAATGTCCAACATTCCCAGTAATTGAAGAAGGAGCTCTGCCATTTCTTGTCACACTTCAGCTGCTATGCAAAGATCTACATGGCCTTTCTGACATCAAAATTGAATGTTTTAAACATCTTCAGGAGGTAACTCTTCATTCTGGAGTCACTCCAGCTACAAGACAGGAATGGGTAAAGGCTGCTAAGGAGCATCCGAATAGGCCAAAAGTATTGCTTCTCAAATCTGTTGATACAGCAGAAAGTGAACATACAGACGTTGATAGTGTAATGGAGGCAGTCAAAAGTGAGACTACAGAATATTCTATTGCACCAGAGGAACCAGAACAAGTGATTGACATGAACAACAAAATGCAACTTGACCATGGATTGGAATCCTCTTCTGTGCTGAACAAACAAAACAATTTTGCAGACCAATCAAGCTCAAAAGATCAACTGCATTATTCTTTCAACAATATGGGGCTTTCAGATGTCTCTCCTGCTGTGAGTGAGCTGCCGAATGGCATGGTGCCTTCTTGTACATGA
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| Protein seq | MIVGAIDDDLSVEHGAAAAAAAVQTLCMEDLRELAHGIEDCIDGVLYRAAREQRRSSSLLPRTVRATKKLLQTNQHLAQELQRLKRMVEEANQRKQRYTAAAPGQHGQVYSSAAAQVDEPWPSCSSASDPRIHEADLVGVDADRAELLEQLAERQPEQLKVIAIVGFCGLGKTALAAEAYNRETRGGRFERHAWVCAAHRSAREVLGELLRRIDAACHGDSDAGQLCVDIRQQLEKKRYFIVIDDIQTEDQWKSIKSAFPTDKDIGSRIVVTTTIQSVANACCSANGYLHKMSRLDKNCSKQLLSKKACPERYSHYKQPDSAAILKKCDGQPLALVTIGEFLQANGWPTGPNCEDLCNRLHYHLENDKTLERMRRVLVRNYTSLPGHALKACLLYFGMFPSDHPIRRKSLLRRWLAEGFVEPVSSSSNLDSTAAFDVLMDRNIIEPINVSNNDKVKTCQTYGMMREFISHMSISQNFVTFFCDDKFLPKYVRRLSLHGDTVVNGDNFNGIDLSLVRSLVVFGEAGTTVLDFSKYQLLRVLDLEKCDDLNDDHLKEICNLVLLKYLSLGGNISKLPKDIAKLKDLEALDVRRSKVKIMPVEVFGLPCLIHLLGKFKLSDKVKQKTEVQEFLSKGKSNLQTLAGFASNGSEGFLHLMRYMNKLRKLKIWCTSSAGSTDWTDLREAIQQFILDEKEANIGTRSLSLHFTGCSEDAINSLKEPCYLSSLKLHGNFPQLPQFVTSLRGLKELCLSSTKFTTGLLEALSNLSYLQYLKLVADELEKFIIKVQGFPRLLCLCIVLQCPTFPVIEEGALPFLVTLQLLCKDLHGLSDIKIECFKHLQEVTLHSGVTPATRQEWVKAAKEHPNRPKVLLLKSVDTAESEHTDVDSVMEAVKSETTEYSIAPEEPEQVIDMNNKMQLDHGLESSSVLNKQNNFADQSSSKDQLHYSFNNMGLSDVSPAVSELPNGMVPSCT |
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| Function | Disease resistance protein RGA4 [UniProtKB/Swiss-Prot:F7J0M6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0007950 | OsAzu_11g0007950.01 | Chr11 | 6632227 | 6638996 | - | NAM | ||
| CDS seq | ATGATCGTCGGCGCCATCGACGACGACCTCTCCGTCGAACATGGCGCCGCCGCCGCCGCCGCCGCCGTACAGACGCTATGCATGGAGGACCTCCGCGAGCTCGCCCACGGCATCGAGGACTGCATCGACGGCGTCCTGTACCGCGCCGCCAGGGAGCAGCGGCGCTCTTCGTCGCTTCTCCCCCGCACGGTCCGGGCAACCAAGAAGTTGCTACAGACAAACCAGCATCTGGCCCAGGAGTTGCAGCGGCTGAAGAGGATGGTGGAGGAGGCGAACCAGCGGAAGCAGAGGTACACGGCGGCGGCGCCCGGTCAACACGGTCAGGTCTACTCATCGGCTGCGGCGCAGGTGGATGAGCCGTGGCCGTCGTGCTCATCTGCCTCAGATCCGCGCATCCACGAGGCGGACCTGGTCGGCGTCGACGCGGACCGGGCGGAGCTCCTTGAGCAGCTGGCGGAGCGGCAGCCGGAGCAGCTCAAGGTGATCGCCATCGTCGGGTTCTGCGGGCTGGGGAAGACCGCCCTCGCCGCGGAGGCGTACAACCGAGAGACCCGCGGCGGGAGATTCGAGAGGCACGCGTGGGTTTGCGCCGCGCACCGGAGTGCACGGGAGGTGCTCGGCGAATTGCTCCGCAGGATTGACGCCGCTTGCCATGGGGACTCCGATGCTGGCCAGCTGTGTGTAGATATCAGACAACAGTTGGAGAAGAAGAGGTACTTCATTGTTATCGATGACATTCAAACAGAAGATCAGTGGAAAAGCATCAAATCGGCTTTTCCGACTGATAAGGATATTGGCAGCAGAATAGTGGTCACGACGACCATCCAGTCAGTAGCTAATGCCTGCTGTTCTGCGAATGGGTATTTGCACAAAATGAGCAGGCTTGATAAGAACTGCTCAAAGCAATTGTTGTCCAAGAAAGCTTGCCCAGAGAGGTATTCACATTACAAGCAGCCAGATTCAGCAGCAATTTTGAAGAAATGTGATGGCCAGCCACTTGCTCTTGTTACCATAGGTGAATTCCTGCAAGCTAATGGCTGGCCAACGGGGCCTAACTGTGAAGATCTCTGCAATCGGCTACATTATCACCTAGAGAATGATAAAACACTTGAAAGGATGCGGCGAGTGCTGGTCCGCAACTACACTAGTCTACCTGGCCATGCTCTCAAGGCCTGCTTACTATATTTTGGTATGTTCCCATCTGATCATCCAATCAGGAGGAAAAGTCTGTTGAGGCGATGGCTGGCCGAGGGATTTGTAGAACCAGTGTCTTCATCTAGTAACCTAGATTCCACGGCTGCTTTCGATGTGCTAATGGACCGGAACATTATTGAGCCCATCAATGTAAGCAATAATGATAAAGTCAAGACATGCCAAACGTACGGTATGATGCGTGAATTCATATCGCATATGTCAATCTCTCAGAACTTTGTCACCTTTTTCTGTGATGACAAGTTCCTGCCCAAATATGTTCGTCGGCTTTCTCTCCATGGTGACACTGTTGTGAATGGCGATAACTTCAACGGTATTGATTTATCACTTGTACGGTCTCTGGTAGTCTTTGGGGAGGCAGGTACAACTGTATTAGACTTCAGCAAGTATCAATTGCTGCGAGTTTTAGATCTTGAAAAATGTGATGATTTGAACGATGATCATCTCAAAGAAATATGCAATCTGGTGCTTCTGAAATATCTGAGCCTTGGGGGTAATATCTCCAAACTTCCAAAGGATATTGCCAAATTGAAAGATTTGGAGGCACTCGATGTAAGGAGATCGAAAGTAAAGATAATGCCGGTAGAAGTCTTCGGGTTGCCATGCCTAATTCATCTGCTTGGAAAATTTAAGCTCTCAGATAAAGTCAAGCAGAAGACTGAAGTGCAAGAGTTTCTCTCGAAAGGAAAAAGCAACTTGCAGACGCTAGCAGGATTTGCTAGCAACGGAAGCGAAGGGTTTCTGCATCTTATGAGGTACATGAATAAGTTGAGAAAGTTGAAGATTTGGTGTACGTCGTCTGCAGGTAGCACCGATTGGACTGATCTTAGGGAGGCCATTCAACAGTTCATTCTGGATGAAAAGGAAGCAAATATTGGTACCCGTTCTTTATCGCTTCATTTCACTGGATGCTCTGAAGATGCGATAAATTCCTTAAAAGAACCCTGCTACCTCAGCTCGTTGAAATTACATGGCAACTTCCCCCAATTGCCTCAGTTTGTTACATCACTTCGTGGTCTCAAGGAGCTTTGCCTTTCATCTACTAAATTTACAACAGGCCTTCTTGAAGCCTTGAGTAATTTGAGCTACTTGCAGTATCTCAAACTGGTTGCCGATGAACTTGAGAAGTTCATCATAAAAGTTCAGGGGTTCCCCAGGCTGCTATGCCTTTGTATTGTGCTACAATGTCCAACATTCCCAGTAATTGAAGAAGGAGCTCTGCCATTTCTTGTCACACTTCAGCTGCTATGCAAAGATCTACATGGCCTTTCTGACATCAAAATTGAATGTTTTAAACATCTTCAGGAGGTAACTCTTCATTCTGGAGTCACTCCAGCTACAAGACAGGAATGGGTAAAGGCTGCTAAGGAGCATCCGAATAGGCCAAAAGTATTGCTTCTCAAATCTGTTGATACAGCAGAAAGTGAACATACAGACGTTGATAGTGTAATGGAGGCAGTCAAAAGTGAGACTACAGAATATTCTATTGCACCAGAGGAACCAGAACAAGTGATTGACATGAACAACAAAATGCAACTTGACCATGGATTGGAATCCTCTTCTGTGCTGAACAAACAAAACAATTTTGCAGACCAATCAAGCTCAAAAGATCAACTGCATTATTCTTTCAACAATATGGGGCTTTCAGATGTCTCTCCTGCTGTGAGTGAGCTGCCGAATGGCATGGTGCCTTCTTGTACATGA
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| Protein seq | MIVGAIDDDLSVEHGAAAAAAAVQTLCMEDLRELAHGIEDCIDGVLYRAAREQRRSSSLLPRTVRATKKLLQTNQHLAQELQRLKRMVEEANQRKQRYTAAAPGQHGQVYSSAAAQVDEPWPSCSSASDPRIHEADLVGVDADRAELLEQLAERQPEQLKVIAIVGFCGLGKTALAAEAYNRETRGGRFERHAWVCAAHRSAREVLGELLRRIDAACHGDSDAGQLCVDIRQQLEKKRYFIVIDDIQTEDQWKSIKSAFPTDKDIGSRIVVTTTIQSVANACCSANGYLHKMSRLDKNCSKQLLSKKACPERYSHYKQPDSAAILKKCDGQPLALVTIGEFLQANGWPTGPNCEDLCNRLHYHLENDKTLERMRRVLVRNYTSLPGHALKACLLYFGMFPSDHPIRRKSLLRRWLAEGFVEPVSSSSNLDSTAAFDVLMDRNIIEPINVSNNDKVKTCQTYGMMREFISHMSISQNFVTFFCDDKFLPKYVRRLSLHGDTVVNGDNFNGIDLSLVRSLVVFGEAGTTVLDFSKYQLLRVLDLEKCDDLNDDHLKEICNLVLLKYLSLGGNISKLPKDIAKLKDLEALDVRRSKVKIMPVEVFGLPCLIHLLGKFKLSDKVKQKTEVQEFLSKGKSNLQTLAGFASNGSEGFLHLMRYMNKLRKLKIWCTSSAGSTDWTDLREAIQQFILDEKEANIGTRSLSLHFTGCSEDAINSLKEPCYLSSLKLHGNFPQLPQFVTSLRGLKELCLSSTKFTTGLLEALSNLSYLQYLKLVADELEKFIIKVQGFPRLLCLCIVLQCPTFPVIEEGALPFLVTLQLLCKDLHGLSDIKIECFKHLQEVTLHSGVTPATRQEWVKAAKEHPNRPKVLLLKSVDTAESEHTDVDSVMEAVKSETTEYSIAPEEPEQVIDMNNKMQLDHGLESSSVLNKQNNFADQSSSKDQLHYSFNNMGLSDVSPAVSELPNGMVPSCT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0007950 | OsAzu_11g0007950.02 | Chr11 | 6635213 | 6638996 | - | NAM | ||
| CDS seq | ATGATCGTCGGCGCCATCGACGACGACCTCTCCGTCGAACATGGCGCCGCCGCCGCCGCCGCCGCCGTACAGACGCTATGCATGGAGGACCTCCGCGAGCTCGCCCACGGCATCGAGGACTGCATCGACGGCGTCCTGTACCGCGCCGCCAGGGAGCAGCGGCGCTCTTCGTCGCTTCTCCCCCGCACGGTCCGGGCAACCAAGAAGTTGCTACAGACAAACCAGCATCTGGCCCAGGAGTTGCAGCGGCTGAAGAGGATGGTGGAGGAGGCGAACCAGCGGAAGCAGAGGTACACGGCGGCGGCGCCCGGTCAACACGGTCAGGTCTACTCATCGGCTGCGGCGCAGGTGGATGAGCCGTGGCCGTCGTGCTCATCTGCCTCAGATCCGCGCATCCACGAGGCGGACCTGGTCGGCGTCGACGCGGACCGGGCGGAGCTCCTTGAGCAGCTGGCGGAGCGGCAGCCGGAGCAGCTCAAGGTGATCGCCATCGTCGGGTTCTGCGGGCTGGGGAAGACCGCCCTCGCCGCGGAGGCGTACAACCGAGAGACCCGCGGCGGGAGATTCGAGAGGCACGCGTGGGTTTGCGCCGCGCACCGGAGTGCACGGGAGGTGCTCGGCGAATTGCTCCGCAGGATTGACGCCGCTTGCCATGGGGACTCCGATGCTGGCCAGCTGTGTGTAGATATCAGACAACAGTTGGAGAAGAAGAGGTACTTCATTGTTATCGATGACATTCAAACAGAAGATCAGTGGAAAAGCATCAAATCGGCTTTTCCGACTGATAAGGATATTGGCAGCAGAATAGTGGTCACGACGACCATCCAGTCAGTAGCTAATGCCTGCTGTTCTGCGAATGGGTATTTGCACAAAATGAGCAGGCTTGATAAGAACTGCTCAAAGCAATTGTTGTCCAAGAAAGCTTGCCCAGAGAGGTATTCACATTACAAGCAGCCAGATTCAGCAGCAATTTTGAAGAAATGTGATGGCCAGCCACTTGCTCTTGTTACCATAGGTGAATTCCTGCAAGCTAATGGCTGGCCAACGGGGCCTAACTGTGAAGATCTCTGCAATCGGCTACATTATCACCTAGAGAATGATAAAACACTTGAAAGGATGCGGCGAGTGCTGGTCCGCAACTACACTAGTCTACCTGGCCATGCTCTCAAGGCCTGCTTACTATATTTTGGTATGTTCCCATCTGATCATCCAATCAGGAGGAAAAGTCTGTTGAGGCGATGGCTGGCCGAGGGATTTGTAGAACCAGTGTCTTCATCTAGTAACCTAGATTCCACGGCTGCTTTCGATGTGCTAATGGACCGGAACATTATTGAGCCCATCAATGTAAGCAATAATGATAAAGTCAAGACATGCCAAACGTACGGTATGATGCGTGAATTCATATCGCATATGTCAATCTCTCAGAACTTTGTCACCTTTTTCTGTGATGACAAGTTCCTGCCCAAATATGTTCGTCGGCTTTCTCTCCATGGTGACACTGTTGTGAATGGCGATAACTTCAACGGTATTGATTTATCACTTGTACGGTCTCTGGTAGTCTTTGGGGAGGCAGGTACAACTGTATTAGACTTCAGCAAGTATCAATTGCTGCGAGTTTTAGATCTTGAAAAATGTGATGATTTGAACGATGATCATCTCAAAGAAATATGCAATCTGGTGCTTCTGAAATATCTGAGCCTTGGGGGTAATATCTCCAAACTTCCAAAGGATATTGCCAAATTGAAAGATTTGGAGGCACTCGATGTAAGGAGATCGAAAGTAAAGATAATGCCGGTAGAAGTCTTCGGGTTGCCATGCCTAATTCATCTGCTTGGAAAATTTAAGCTCTCAGATAAAGTCAAGCAGAAGACTGAAGTGCAAGAGTTTCTCTCGAAAGGAAAAAGCAACTTGCAGACGCTAGCAGGATTTGCTAGCAACGGAAGCGAAGGGTTTCTGCATCTTATGAGGTACATGAATAAGTTGAGAAAGTTGAAGATTTGGTGTACGTCGTCTGCAGGTAGCACCGATTGGACTGATCTTAGGGAGGCCATTCAACAGTTCATTCTGGATGAAAAGGAAGCAAATATTGGTACCCGTTCTTTATCGCTTCATTTCACTGGATGCTCTGAAGATGCGATAAATTCCTTAAAAGAACCCTGCTACCTCAGCTCGTTGAAATTACATGGCAACTTCCCCCAATTGCCTCAGTTTGTTACATCACTTCGTGGTCTCAAGGAGCTTTGCCTTTCATCTACTAAATTTACAACAGGCCTTCTTGAAGCCTTGAGTAATTTGAGCTACTTGCAGTATCTCAAACTGGTTGCCGATGAACTTGAGAAGTTCATCATAAAAGTTCAGGGGTTCCCCAGGCTGCTATGCCTTTGTATTGTGCTACAATGTCCAACATTCCCAGTAATTGAAGAAGGAGCTCTGCCATTTCTTGTCACACTTCAGCTGCTATGCAAAGATCTACATGGCCTTTCTGACATCAAAATTGAATGTTTTAAACATCTTCAGGAGGTAACTCTTCATTCTGGAGTCACTCCAGCTACAAGACAGGAATGGGTAAAGGCTGCTAAGGAGCATCCGAATAGGCCAAAAGTATTGCTTCTCAAATCTGTTGATACAGCAGAAAGTGAACATACAGACGTTGATAGTGTAATGGAGGCAGTCAAAAGTGAGACTACAGAATATTCTATTGCACCAGAGGAACCAGAACAAGTGATTGACATGAACAACAAAATGCAACTTGACCATGGATTGGAATCCTCTTCTGTGCTGAACAAACAAAACAATTTTGCAGACCAATCAAGCTCAAAAGATCAACTGCATTATTCTTTCAACAATATGGGGCTTTCAGATGTCTCTCCTGCTGTGAGTGAGCTGCCGAATGGCATGGTGCCTTCTTGTACATGA
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| Protein seq | MIVGAIDDDLSVEHGAAAAAAAVQTLCMEDLRELAHGIEDCIDGVLYRAAREQRRSSSLLPRTVRATKKLLQTNQHLAQELQRLKRMVEEANQRKQRYTAAAPGQHGQVYSSAAAQVDEPWPSCSSASDPRIHEADLVGVDADRAELLEQLAERQPEQLKVIAIVGFCGLGKTALAAEAYNRETRGGRFERHAWVCAAHRSAREVLGELLRRIDAACHGDSDAGQLCVDIRQQLEKKRYFIVIDDIQTEDQWKSIKSAFPTDKDIGSRIVVTTTIQSVANACCSANGYLHKMSRLDKNCSKQLLSKKACPERYSHYKQPDSAAILKKCDGQPLALVTIGEFLQANGWPTGPNCEDLCNRLHYHLENDKTLERMRRVLVRNYTSLPGHALKACLLYFGMFPSDHPIRRKSLLRRWLAEGFVEPVSSSSNLDSTAAFDVLMDRNIIEPINVSNNDKVKTCQTYGMMREFISHMSISQNFVTFFCDDKFLPKYVRRLSLHGDTVVNGDNFNGIDLSLVRSLVVFGEAGTTVLDFSKYQLLRVLDLEKCDDLNDDHLKEICNLVLLKYLSLGGNISKLPKDIAKLKDLEALDVRRSKVKIMPVEVFGLPCLIHLLGKFKLSDKVKQKTEVQEFLSKGKSNLQTLAGFASNGSEGFLHLMRYMNKLRKLKIWCTSSAGSTDWTDLREAIQQFILDEKEANIGTRSLSLHFTGCSEDAINSLKEPCYLSSLKLHGNFPQLPQFVTSLRGLKELCLSSTKFTTGLLEALSNLSYLQYLKLVADELEKFIIKVQGFPRLLCLCIVLQCPTFPVIEEGALPFLVTLQLLCKDLHGLSDIKIECFKHLQEVTLHSGVTPATRQEWVKAAKEHPNRPKVLLLKSVDTAESEHTDVDSVMEAVKSETTEYSIAPEEPEQVIDMNNKMQLDHGLESSSVLNKQNNFADQSSSKDQLHYSFNNMGLSDVSPAVSELPNGMVPSCT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.586948 | 13.903722 | 3.891642 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0225100 | RBH | 0.515996 | 0.357768 | 1.940268 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11790 | RBH | 0.348943 | 0.240629 | 0.499463 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0225100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008020 | RBH | 0.275110 | 12.469207 | 1.879411 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007970 | RBH | 0.365392 | 5.143244 | 1.810272 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007840 | RBH | 0.993562 | 7.435786 | 2.405322 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007740 | RBH | 0.194044 | 0.375342 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007760 | RBH | 6.714519 | 2.015030 | 7.583820 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0104700 | RBH | 4.2952465 | 10.664413 | 4.5833245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007750 | RBH | 0.147804 | 0.476078 | 0.686691 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0110900 | RBH | 8.599647 | 14.278709 | 6.833309 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007920 | RBH | 0.096497 | 0.112980 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007850 | RBH | 0.448307 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007820 | RBH | 8.138488 | 5.528563 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007830 | RBH | 0.214812 | 0.0 | 0.522603 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007880 | RBH | 0.196939 | 2.028324 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007930 | RBH | 0.411344 | 2.441388 | 0.656447 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007730 | RBH | 0.480448 | 4.359731 | 3.601136 |
