Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_10g0000820 OGI:10004850 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr10:1461066-1467747
Gene Symbol -
DNA seq

ATGTCACTGTCGTCACGTCTCCACCAGGCAGTGACCATGCTCTCGTAGGCGCAGGTGCCAAACCTCCACGGCATCCAAACGTTGCTCGCCGTCGATGAGGAGACGCCACCCGCGCCGGACCTGGTGCAGAGTTGGAGCCTTGCGGCGTCGCGACAAGCTTACCACAACATCACCGCCGCGCCATGCCACCACACGTCGTCTCTGATGAGGGTGCTCCTCCACGCGTTCCGCGGCTTCTACCTGCGGGCGCTGGCGCGACTGCCGGTCGACGAGTTGCGCAACCGCTACCACCAAGTGATAGTCAAGGCCGCTCACTGCTACAGGCCCATGTAACCCGTCTCCAACATCATCCTCAACAACGTCTGGGACGACGCCGCGTTCCCGGCGATTGCCACACCACCGGTGCTTGACATGAGCGGCCCGCACATCCTCACCCACATTGAGAGCTGATCCTTTTATGGCCTCGTCTCCTTCCTGCAGAGCCGGTACCATCACCTCTCTGAACAGGACATCTTACAGTAGCTGGTCACCCACTTCAACGACATGTCGCTCGCGGATCCCAACCTCGACTCCGACGAAGCCATGGTGATCAAGGCTGAGCAACAGAGCCCGTGCGCCGGCGTGCAAGAAGCCTATGAGGCGACGACCACGGCGGCGTGGCACCCCATCCCTATGGCGCAAGCTGCATTCCTCACCTCTTGCAAGGCGAAGCTGCAGGAATCACCGGCTACCATGTCGCTGCAGCAGCAGGATGGAGACCGCATTCTCTCGCCCTAGGATGTCCGGTACCTCGCCGGCGTGTTGCTAGCTGAGCAGAAGCCATCTCCTCAACCAGTCCGCAAGAAATCCACATGGCCTTTGTCCGATGGCAAGATGCGCTCCATGATCGAGCAAAGGAGGATCTCTAGGAATGTCAAAGTTACCCTGAACCAACACTTTTTGCGAGATGGGGTTGGTTTTGCTTCTTTTCATCATATCTACACAACTTATGATATACTGCCAATGCAATTTGCTCATTGTCGTAGCTTTATTTTGTAGAAACCTATGTACAAGCTTCATGTGATTTGTGGCACGAATGACTCGGTGTGCAGTCCAGAGTATTATTGCTCCAAGCAGGAAGATTACCTTTCCTTTGCACCATGCGACTATAAGTACACACATGTCAACTTCTTGGCCACGGAGAAGGTGGGTTGTTTATCATCTTTTCGCCGAGTTTGACAATAAGAAGGATGAGGGTGAACCGGCTGTCATGTGTTGCAAGGGTGATATGCCATTGCCATTTGCTGGTAAGCTGCTTGATTTGTTATATATGTTAAAAAAATGCAGCATTCATAACAATTTTCAATTACAATATATGGATAAAACTAAAAAAATACTATGGAAGTACTTACTATAACCAGACTGCCACATATAGTTAGAGTGAATTATTTTAAGAATACAACAAGGATACATACGTAATTATTATGTCCCATATTGTAGTCCAAGATTGATTTCGATCTGACGCGTGAGTGTAGGTTATAAATGGATTTTTGTTCCTTTTTCATACACATTAGAAATGGTGAATTGCAACTGTGTTTTCACTGTCGAAAATTTACTTATTAATTCATCACCTTTGTTGAAGATTTTTATTTTATTTTATTTTATTAATTATCACCAGAACATGTTCGGTGTCTGTACTGTGAAGTTGAAGAAGCAAAGGTTGTACATCCAGCTCTGGAGAAATTTCATGGTGGAGACAGAGAATTCGAGGAGGTGATCCGTGGAAAACATTCTCTCACAAATAGTTGGATTATTTGCCTTAACGAATACGCTGTCCAGCGCTTGTATGCACATAACGAGGATTTCATGTATGTTGATGTAGCATAGAGTCCAAATGCCCTTTTTTAGTGATGATTACTGATCAATATGGGGTGTGTGCATGCCATGTCTTTGATAGGTACATTTGGAGTGATATAGGCCGTCTATTGAATTTGATCTAACGGACTACAATCGATCGGTTCAGTTATACTTGGTTGTTTCGAGTAGTAGAATTAGTAAACGGAATTGCTATAATCATGCAACAGTTTTTGGAGATTGCTATAGAGCAATGTTACACGTACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTCAACCGTTTGATTAAAGTAGATGGAAGTTACAAAAAATCTAGATGCACTCGTAGCATGACATATCAGTGTTAGTAAGAATTTAGTAAGAAAAAGTTAGTACGTATAGCCTTTTCCATTGCTATAATCATGCAACAGTTTTTGGAGAAAATCTTTCGATTTTCGGGTCGTTGATATGTCCTAAGTTCGTGCGTAAATAGATTGAAAAAAGGGGAAAATCTTTTGATGTTTTGGCCGTTGATCCGTCCCAAGATTCGTGTGCAGATAGATTGGAAAAATATTTGCCTCTCCATCAAACCCTCCTAAGTCCTACCACTGGGTTAGCACTAGTTTTACACTCAATACAAATGTAAACTCTAATAACATTGTGGTTACAGTTTAGTTACACTGTAACATTGGTGTCACTACAGTGTAATAACTACTCCCTCTATCGTAAAATATAATAAGTTTTGGTTAGATGGGATGTTTGTCCAAATTTACAGTACTAGGATGTGTCTCATCCAACCAAAACTACTTATATTTTTTAACAGAGGGAGTACATTGTAACTACATTCTAATCTTCATATAACTTAGATATAAAATTGTTTATATTTTTTAATACTTACATATAAGTTATATTATAGTTATAGTATAATTATGGCAGAATTATATTACAACTAGCTATACAGTTAGATTTGAATGTTTTCCACCGAAAACATTTGCGGCGGTTTTCTAGATAGTCCCATTAGTAAATAGGTAGAATTGGACAAAAAAAATGCATGGTGAAGAAGTATTCCCTCCGTCTCAAATTATAAGGCCTATATTTTTTAACATGATCTTCAATGACATACTTTGAGCATTAATTTATTTCATGTTATGTTCTCAGCATATATATGGTTAGTATGATTATTAGTCAAAAATTATATATTGAATTTGATTTTCCTTAAAAAGATAGCACCCTATAAAATCGTATGAATTAATTTGGGACTATCTATGGTAATGTCCACACATTTTTCAAACGATCTCAGTCGATTTTTTTTTCTACTCTACGATGGCCGGCTAGCAATGCGCCAAAGCAGATGCATGTTAGCCTTTAATCCATGCAACCCTTATCAGTAGGTTGTGTATATATGGATGATGTGACGAGTGATTTCTTTACAAACTAGGGTATGTATAAACAACAAGCTCTATGAAAAGGACTGTTTCGTATGGTCGCTTTATAAGAATGGTTAATTTTCCGTTAAATCTATATATGCCGCGATCATAACCTGTAATGTTCGGATAAAAGGAGAATTCTGTGGAATTTGAAAATTCCACTAAAGATCAAGGTCTTTATGTGGTTTCTTCACAGGAAAGTAATTCTAACGAAAGATAACTGGGCTAAAAAAAATAGGGGGAGACATATTGTTCTTTCTGCTATGCACAAGAGACAATCCAACATCTTTTCTTTGAGTGTCATGTCGCTCAGTTTGTTTGGAGATGTGTGTTTTTTTGCTTTTAATATCCCCCACCCCGTAACGCCAAAAACATTTTCAGTAATTGGCTTAGAGGGGTACCTAGATCCATTAAAAAGATGATTCTAATTGGAGCTAGTGCTGTATGTTAGTCAATTTGGCGTTGTCGTAATGATAAATTTTTTAATAGTAAACAATTATCTAACCCTATGCAGGTTATCTTCATGTCTTCCTACTGGCTCCACTTTTGGTCTACGATGCTATCACAGGAGGAGCATGATACTATGCGTAATGGTGCTACACTCTTGAAATCGGTAGCTAAGGGTCTCTTATTCCACTATGTGTGGCGTAGTTCCATTAGAATTGCTAGCTAAAAAAAATTATGTGGTTTAACGATAGTCAATAATAAAGGGGAGTTGGGGAATTGTCCCATCACCTTATTTCTTATTTTGGTTTACTTTTATCTTACCTTTTTTATTACTATTAAACTTATGATTGTGTGTCTTATGATAGAAGCCGGAGATGTAATCCATTTCCATTATCTAAAAAATATACGAAAATAACATATTTGGTGGACATTCGTATAAACATGTTTCAAACAATTTTTAATATTTACTATAAAAATTACACTAAAATTACACTGTAATTGCGTGAATATTATGGTGCAACTTAATTTTATCATGTCTAAAAATTGGCTACTAGCATAGCATGCCGGCATAAAATACAGCACTTGTGAAAAGAAAACGTGATTATCTCTTCGTCTGCCCGTCCCATAGGAAAAGTTAAAAAGTGAGAGCGTGTCAGGACATAACACGAGATGAGAAATTTAAATTTAACTGTTTGGTTTCACATACAAAGACCTCCCATCAGTGCACTGGTATTTCGAATCTCAATGGAGATCAGTTTATCAAAAAAGTCAACTGTGATTACCGAAAAAATGTGTGTCGATATAATTATAGCAACAACTATTAATTTGGGGATTTGCTATAGCACAAAACTGATTAATTTAGAAATTTCGGTAGATCCTAGTTAACAGATAGAGTAAAATATATGGCCGGTACTTAAAACTTGAGGGATAGTGTCAGTTAATTTCCACGATCTGTACCAAACCAGGTTTAAACGACCTTTGACCCTCACTGACCACCAACGTGGCAGGTGGCACATTTGCATCTGCCCCCCTCTGCATTGATGGCATGCCACACAGGCGACATATTAGAAAGAAAGAAAACTAAAAAGATACGAGGGGGAGCAGGAGCAGCATGCTCGGGCTCTACGATCATCAAGGCGGAGCAACAGAGCCCGTGCGCCGGCGTGCAAGAAGCCTACGAGGTGGCGGCGTGGCACCCCAACCCTGAGGCGCCGCCATGTCGCTGCTGGTGCAAGAGGACAGAGACGGGACTCTCCCGCCGGAAGATGTCGGGTTCCTTGCCAGCGTGTTGCTCACAGAGCAGAAGCCATCTCCTCAAGCGGTCCGGAAGAAGTCCTTCTGGCCCGTCGTCGTGCACGGCAAGATGCGGTCCATGGCTGAGCTGAGCAAGACGTCTTCCAAGGTCAAGGCAGCATTGAACCAACACTTGCCGCTAGATGGGGTTAGTTGTTCTGCTGCTAATTTATTTACGGTTTTTTTATTTCAGACTTTTGGCTTCTATCTTTTACATTTTTGTCCGTAGAGTCTTACATCAAGATTCGTGTTCTCGTATATCTAAATTACAATTATACTTAATTACGAAGCATTTCTACTTAGTTACAGTTGATGTACACTCGGTTACAGTGCACCAAAATATTTTACAACATTTTTTTCTCTACATTTATGATTTTTTTTACTTTCTTGTTTCTTATTTTTGTTTATTTCATTTAATACGGGTTATATCCATTGGTTGGAAATTCTGCAAAATTCAAAGTTAATCTGTCACAAAATCAATAGTTGGTCCATTGATTCATATACTCAATCTCTCCTAAAATAAATCAACGTTCAATCATTGATCTATAAAAGATTATTTATTTTAGGATTGCAAAAGTAAATTATATGCTAAATGTGACTAATATAATACAATTTGCTGATTTTGCGCCACGATTTTGTAGGAACCTATGTCGAGCTTCATGTGATTTGTGGATTCCTTTGCACCTTGCAAGTTCAGGTACACTCATGTCAACTTCTTGGCCACAGAGAAGTCAGCTTCTCCGTCATCTCCGGTGCTCTTCTTTGCCGAGTTTGACAACGAGAAGGCCGAGGGTGAATCACCTGTCTTGTGTTGCAAGGTGGATATGCCACTTCCTTGTGCAGGTAATTAGATCCATGCATGTTAATTAGATTTTATAATGTATGCAGATAATTTGGAAAGCATGTCTGTTAAAAACATTGGTAATGTTGAGTACAACACCACCAAACATCTAATGACTTTCAAATTTACTCCCGGCAAAGTAGTATTTACAAGCCAATGGCATGCAAATGTATAAGATAATTGTGATTAAAAATTTATTTATTATTATCTACATGGAAGTGATAAGAGGGATAAAAGAGAGAGTAATCACATAGAAAAAAATGACTAACTGAAAAATGTGGCGCTATATTTCTTTTAGCAAACCCGATAAGATAATGGTGGTTTTGGTGCATGTTTGTGGGATGAATGTGGTTTCGAGGGTTTAAGCTATAATTAATTATGTCCCTTTTTCATACTCATTATTTTTTCGATCCCTTTCATGTACACATTACATAAGTCAAAGTTACAGCTATATTTTTGCTGCTCACCAATTATTTTAGACACTCAATACAACAATTGAACTTTCTGATAATCTGAGTACTTTATTTTGAACGGAACATGTCCGGTGCCTGTATTGTGAAGTGCAAGGAGCAAAGGTTGTGCATCCAGCTTTTCAAAAATTTCAAGGTGGAGACAAAGAATTCGAGGAAAAAAATAAAAACAACCAAAAATAAAAATAAAAAAATGAACATGTGCAGTAGGAAAAAAAACTTGTGATTGCAGGTTGGCAAATCTATCACACAAGTTAAATGCCCTGGTCTTCAAAATCTCCCCCATACAGATCATGGCATCTGTAATTTCAAAAATTCTGAACATATTGATTACTATTATTGCAGTCCAATACGAAATCATGA

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CDS seq

ATGTCCGCTGAGCAGAAGCCATCTCCTCAACCAGTCCGCAAGAAATCCACATGGCCTTTGTCCGATGGCAAGATGCGCTCCATGATCGAGCAAAGGAGGATCTCTAGGAATGTCAAAGTTACCCTGAACCAACACTTTTTGCGAGATGGGAAACCTATGTACAAGCTTCATGTGATTTGTGGCACGAATGACTCGGTGTGCAGTCCAGAGTATTATTGCTCCAAGCAGGAAGATTACCTTTCCTTTGCACCATGCGACTATAAGTACACACATGTCAACTTCTTGGCCACGGAGAAGGATGAGGGTGAACCGGCTGTCATGTGTTGCAAGGGTGATATGCCATTGCCATTTGCTGAACATGTTCGGTGTCTGTACTGTGAAGTTGAAGAAGCAAAGGTTGTACATCCAGCTCTGGAGAAATTTCATGGTGGAGACAGAGAATTCGAGGAGGTGATCCGTGGAAAACATTCTCTCACAAATAGTTGGATTATTTGCCTTAACGAATACGCTGTCCAGCGCTTGTATGCACATAACGAGGATTTCATGAGCAGCATGCTCGGGCTCTACGATCATCAAGGCGGAGCAACAGAGCCCGTGCGCCGGCGTGCAAGAAGCCTACGAGGTGGCGGCGTGGCACCCCAACCCTGA

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Protein seq

MSAEQKPSPQPVRKKSTWPLSDGKMRSMIEQRRISRNVKVTLNQHFLRDGKPMYKLHVICGTNDSVCSPEYYCSKQEDYLSFAPCDYKYTHVNFLATEKDEGEPAVMCCKGDMPLPFAEHVRCLYCEVEEAKVVHPALEKFHGGDREFEEVIRGKHSLTNSWIICLNEYAVQRLYAHNEDFMSSMLGLYDHQGGATEPVRRRARSLRGGGVAPQP

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0000820 OsAzu_10g0000820.01 Chr10 1461066 1461842 + NAM
CDS seq

ATGTCACTGTCGTCACGTCTCCACCAGGCAGCGCAGGTGCCAAACCTCCACGGCATCCAAACGTTGCTCGCCGTCGATGAGGAGACGCCACCCGCGCCGGACCTGGTGCAGAGTTGGAGCCTTGCGGCGTCGCGACAAGCTTACCACAACATCACCGCCGCGCCATGCCACCACACGTCGTCTCTGATGAGGGTGCTCCTCCACGCGTTCCGCGGCTTCTACCTGCGGGCGCTGGCGCGACTGCCGGTCGACGAGTTGCGCAACCGCTACCACCAACTGGTCACCCACTTCAACGACATGTCGCTCGCGGATCCCAACCTCGACTCCGACGAAGCCATGGTGATCAAGGCTGAGCAACAGAGCCCGTGCGCCGGCGTGCAAGAAGCCTATGAGGCGACGACCACGGCGGCGTGGCACCCCATCCCTATGGCGCAAGCTGCATTCCTCACCTCTTGCAAGGCGAAGCTGCAGGAATCACCGGCTACCATGTCGCTGCAGCAGCAGGATGGAGACCGCATTCTCTCGCCCTAG

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Protein seq

MSLSSRLHQAAQVPNLHGIQTLLAVDEETPPAPDLVQSWSLAASRQAYHNITAAPCHHTSSLMRVLLHAFRGFYLRALARLPVDELRNRYHQLVTHFNDMSLADPNLDSDEAMVIKAEQQSPCAGVQEAYEATTTAAWHPIPMAQAAFLTSCKAKLQESPATMSLQQQDGDRILSP

Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0000820 OsAzu_10g0000820.03 Chr10 1465997 1467747 + NAM
CDS seq

ATGTCGCTGCTGGTGCAAGAGGACAGAGACGGGACTCTCCCGCCGGAAGATGTCGGGTTCCTTGCCAGCGTGTTGCTCACAGAGCAGAAGCCATCTCCTCAAGCGGTCCGGAAGAAGTCCTTCTGGCCCGTCGTCGTGCACGGCAAGATGCGGTCCATGGCTGAGCTGAGCAAGACGTCTTCCAAGGTCAAGGCAGCATTGAACCAACACTTGCCGCTAGATGGGTTCAGGTACACTCATGTCAACTTCTTGGCCACAGAGAAGTCAGCTTCTCCGTCATCTCCGGTGCTCTTCTTTGCCGAGTTTGACAACGAGAAGGCCGAGGGTGAATCACCTGTCTTGTGTTGCAAGGTGGATATGCCACTTCCTTGTGCAGATAATTTGGAAAGCATGTCTGTTAAAAACATTGGTAATGTTGAGTACAACACCACCAAACATCTAATGACTTTCAAATTTACTCCCGGCAAATCCAATACGAAATCATGA

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Protein seq

MSLLVQEDRDGTLPPEDVGFLASVLLTEQKPSPQAVRKKSFWPVVVHGKMRSMAELSKTSSKVKAALNQHLPLDGFRYTHVNFLATEKSASPSSPVLFFAEFDNEKAEGESPVLCCKVDMPLPCADNLESMSVKNIGNVEYNTTKHLMTFKFTPGKSNTKS

Gene Transcript Chromosome Start End Strand Source
OsAzu_10g0000820 OsAzu_10g0000820.02 Chr10 1461844 1465987 + NAM
CDS seq

ATGTCCGCTGAGCAGAAGCCATCTCCTCAACCAGTCCGCAAGAAATCCACATGGCCTTTGTCCGATGGCAAGATGCGCTCCATGATCGAGCAAAGGAGGATCTCTAGGAATGTCAAAGTTACCCTGAACCAACACTTTTTGCGAGATGGGAAACCTATGTACAAGCTTCATGTGATTTGTGGCACGAATGACTCGGTGTGCAGTCCAGAGTATTATTGCTCCAAGCAGGAAGATTACCTTTCCTTTGCACCATGCGACTATAAGTACACACATGTCAACTTCTTGGCCACGGAGAAGGATGAGGGTGAACCGGCTGTCATGTGTTGCAAGGGTGATATGCCATTGCCATTTGCTGAACATGTTCGGTGTCTGTACTGTGAAGTTGAAGAAGCAAAGGTTGTACATCCAGCTCTGGAGAAATTTCATGGTGGAGACAGAGAATTCGAGGAGGTGATCCGTGGAAAACATTCTCTCACAAATAGTTGGATTATTTGCCTTAACGAATACGCTGTCCAGCGCTTGTATGCACATAACGAGGATTTCATGAGCAGCATGCTCGGGCTCTACGATCATCAAGGCGGAGCAACAGAGCCCGTGCGCCGGCGTGCAAGAAGCCTACGAGGTGGCGGCGTGGCACCCCAACCCTGA

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Protein seq

MSAEQKPSPQPVRKKSTWPLSDGKMRSMIEQRRISRNVKVTLNQHFLRDGKPMYKLHVICGTNDSVCSPEYYCSKQEDYLSFAPCDYKYTHVNFLATEKDEGEPAVMCCKGDMPLPFAEHVRCLYCEVEEAKVVHPALEKFHGGDREFEEVIRGKHSLTNSWIICLNEYAVQRLYAHNEDFMSSMLGLYDHQGGATEPVRRRARSLRGGGVAPQP

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g02670 SBH 0.000000 0.447780 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0000770 RBH 0.0 0.0 0.538495
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0000770 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0000810 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0000750 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0000780 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0021900 RBH 0 0.0748875 0.033701
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0000820 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_10G0024300 RBH 0 0.072691 0.009109
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0000800 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0000850 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0000790 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0054640 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0000780 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G000800 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0000710 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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