Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_09g0007680 | OGI:09035810 | 13/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr09:12218531-12219428 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGTGGTATGATTTCCACGAAAAAGAAAAACTGTAGCTTCTACCTGAAGCTTAACACTGGAGGTTACCTAGCTATATTTGTTCCCTTCATTTAAGAAAAAAAAATCAAATCCTAATAATAAATCTGAACATGTAAATGTCTAGTAGCTTCATAACTAAGATTTGATAAGCACATACTTCGAAGGAGCCATGGCAGTGCGACGCCTGCAAGCAGCCCGGGTTCGGCGAGCTGTACGCCTGCGACGCCTGCGGCTTCCACCTCCACTACATCTGCGCCCACGCCGAGGAGACGATCACCCACCCGCTCCACCGGGACAGGTGCTGCACGTTCACGCTCCACGACCGTGCGCCGGGGCGAACACGGCGGTTCTGCGACGCGTTCGGCGAGATCGCGGCGCCGGCGGGGCTCGTCTACCACTGCGCCTGCGGCAGCCGCGACCTGCACCCGTGCTGCGCCGGGCTGGACCGGAGCCGGCCAACCGACGACGGCGGCGTACTCCACCTCCGCAAAGCGTCGTCGTCGGCGCGCTGGCGCTGCGACTGCTGCGGCGAGCGGAGCGACTACTGGGTCTACCGCTCCGGGTCCGGGAACGTCACGCTGAACGTGTCGTGCCTGAAGAAGATGGCCGCGCGCGAGTCGGTGCTCGCGTACCTCCGGCCGCAGGACGGCAGCGCCGCCGGCGACGAGGAGTCGTCGGCGGGCCAGCAGCCGGCGGACGCGTTGGTGGTTCGGGTTCCTCGAGGAGCGGTGCAGAGAACCACCACCACCAGGGGTGACGAGCATTGGCTCCAGCGCCTGTGCAGGATTGCTGGGACGGCAATACGTATCATCATCGGCACCATCCTTGGAGATCCGACGGCTCTGATTGCCGCGGTGGTTGCTGGTTTCTTGCAGTAA
More
|
||||||||||
| CDS seq | ATGGTGCTGTACGCCTGCGACGCCTGCGGCTTCCACCTCCACTACATCTGCGCCCACGCCGAGGAGACGATCACCCACCCGCTCCACCGGGACAGGTGCTGCACGTTCACGCTCCACGACCGTGCGCCGGGGCGAACACGGCGGTTCTGCGACGCGTTCGGCGAGATCGCGGCGCCGGCGGGGCTCGTCTACCACTGCGCCTGCGGCAGCCGCGACCTGCACCCGTGCTGCGCCGGGCTGGACCGGAGCCGGCCAACCGACGACGGCGGCGTACTCCACCTCCGCAAAGCGTCGTCGTCGGCGCGCTGGCGCTGCGACTGCTGCGGCGAGCGGAGCGACTACTGGGTCTACCGCTCCGGGTCCGGGAACGTCACGCTGAACGTGTCGTGCCTGAAGAAGATGGCCGCGCGCGAGTCGGTGCTCGCGTACCTCCGGCCGCAGGACGGCAGCGCCGCCGGCGACGAGGAGTCGTCGGCGGGCCAGCAGCCGGCGGACGCGTTGGTGGTTCGGGTTCCTCGAGGAGCGGTGCAGAGAACCACCACCACCAGGGGTGACGAGCATTGGCTCCAGCGCCTGTGCAGGATTGCTGGGACGGCAATACGTATCATCATCGGCACCATCCTTGGAGATCCGACGGCTCTGATTGCCGCGGTGGTTGCTGGTTTCTTGCAGTAA
More
|
||||||||||
| Protein seq | MVLYACDACGFHLHYICAHAEETITHPLHRDRCCTFTLHDRAPGRTRRFCDAFGEIAAPAGLVYHCACGSRDLHPCCAGLDRSRPTDDGGVLHLRKASSSARWRCDCCGERSDYWVYRSGSGNVTLNVSCLKKMAARESVLAYLRPQDGSAAGDEESSAGQQPADALVVRVPRGAVQRTTTTRGDEHWLQRLCRIAGTAIRIIIGTILGDPTALIAAVVAGFLQ |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_09g0007680 | OsAzu_09g0007680.01 | Chr09 | 12218531 | 12219428 | + | NAM | ||
| CDS seq | ATGGTGCTGTACGCCTGCGACGCCTGCGGCTTCCACCTCCACTACATCTGCGCCCACGCCGAGGAGACGATCACCCACCCGCTCCACCGGGACAGGTGCTGCACGTTCACGCTCCACGACCGTGCGCCGGGGCGAACACGGCGGTTCTGCGACGCGTTCGGCGAGATCGCGGCGCCGGCGGGGCTCGTCTACCACTGCGCCTGCGGCAGCCGCGACCTGCACCCGTGCTGCGCCGGGCTGGACCGGAGCCGGCCAACCGACGACGGCGGCGTACTCCACCTCCGCAAAGCGTCGTCGTCGGCGCGCTGGCGCTGCGACTGCTGCGGCGAGCGGAGCGACTACTGGGTCTACCGCTCCGGGTCCGGGAACGTCACGCTGAACGTGTCGTGCCTGAAGAAGATGGCCGCGCGCGAGTCGGTGCTCGCGTACCTCCGGCCGCAGGACGGCAGCGCCGCCGGCGACGAGGAGTCGTCGGCGGGCCAGCAGCCGGCGGACGCGTTGGTGGTTCGGGTTCCTCGAGGAGCGGTGCAGAGAACCACCACCACCAGGGGTGACGAGCATTGGCTCCAGCGCCTGTGCAGGATTGCTGGGACGGCAATACGTATCATCATCGGCACCATCCTTGGAGATCCGACGGCTCTGATTGCCGCGGTGGTTGCTGGTTTCTTGCAGTAA
More
|
|||||||
| Protein seq | MVLYACDACGFHLHYICAHAEETITHPLHRDRCCTFTLHDRAPGRTRRFCDAFGEIAAPAGLVYHCACGSRDLHPCCAGLDRSRPTDDGGVLHLRKASSSARWRCDCCGERSDYWVYRSGSGNVTLNVSCLKKMAARESVLAYLRPQDGSAAGDEESSAGQQPADALVVRVPRGAVQRTTTTRGDEHWLQRLCRIAGTAIRIIIGTILGDPTALIAAVVAGFLQ
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g20150 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0007670 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007890 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007870 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0208600 | RBH | 0 | 0.0069075 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007830 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0188500 | RBH | 0.0328275 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0007760 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0007580 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0007490 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0007560 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007920 | RBH | 0.0 | 0.0 | 0.0 |
