Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_09g0005120 | OGI:09026040 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr09:8818156-8823242 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAATATTCTCCATATCAGGTGACCTCATCGACGACCTCGCCGGAGACCTCACCGGCGAGTGGCGACCGCGCGCTGATGGGCGGCGACGGCGACCCCCCTCACCTCGTCTTCTTCCTCCCGGACCACGTTCTCGTCTTCCTCCTTTCAGATCCTGGCATCTCCATCCTCTCCGCGCCGGCTAGGCTACCTCTCGAGGCCACCGCCTCCACCGGAGCTCATGCCGACCGCCGTTGCAGCCGGAGCATCCCACTTCGACCGCCGCCGGCGCTGCCGGATCTACTGGGGGCCTGCTTCTGGTTCGTTTCTCTGCCCACACCAATTCATTTGCAACAGTTGCATCCCAACAGAGATTGAATCGAAATGCGGCCTCCATTTTCGTCCCCGATTTCTGTGGCAACCACAAACTAAAATTGGAACTAAAGAGCAGATTTAATTCAGTTTGGATTTGAATTGGAGGCTCATTTCAATTATTCTAGTCCAATTCCGTAAAACCAACTGGAGCCAATAAATCTGTTCGCCTTTTTTCTCTAGCCAATAAATCTGTTCCCAAGTATTCCACGAAATTCATCAGTGTGGAATATTTATGCAATGCATGCATGAAAACTTCAAATATCCATGTCATCAATAACCAAAGAGATAAGTAGATAAAATTTCAAGAGTAAATTAACCATCATATCTATCTAAATTTTTGTACTATTTCCCCAGCAAGTTCACGTATTGACAAACTGCCATTTACAGTCAAATTGTGCAAGATGTAAAATAGTAGACCATGGAACATGGTAATTATCACTATTCATTATTATTCGGTAATTAACCCTAAACATGGTAATTATCACTATTCATGGTTAATTTGCCCAGGGGCGGAGCTAGAACGAAATGGAGGGGGTGCCATTTGCTTAATTTAATCTACTTTATATTGAGTTTAAGCTGATGCGGGTGCCTAAATTTGTATCGAGGGTAGTGTATACATGGTGAAAATAGGTGAATTCTAGCTACGAAATTTTCTTAACCGGGTTTCTGGCACCCCCCCCCCTCCTCAATACCCTAGCTCCGCCCCTGATTTGCCCTTAATGAGCCATCCTGAATCTAAGTACCACGATTTTTGGGACAATACTGTCATCAACATAAGGGGAATATTCCCTAAGTAGAATGAATGAAGACAAGTAGCCAAAACACCTTTATATGCCATTGCTGTCTACCCTCCATATTAGCCTCACTGTTGAGTGTAGATGAAGGTAGAAAAACACCGAAGACACTAATATTTCCACGTGATGTAAGTCCACAAGCCAGGAAAAGAACAACAGAGAAGGCATAAACCCTTGGTTGTCCCACCCAACCTCACTCTTCGATTTGGTGTGTCAAGATGTCATCCAGTAAAAAATCGCTTATTTGTCACATAGTCGGGTGCTGTCCTCAATTTTTCTACAAAGTTTATTGGCTTTGCTGAAATCAGTACTAAACTTCAAGTTTTGCGATAGGTGGTTTTCGTGTTGAAATAGTTTTGTCGAAGTATGTGTATTTTTGCTAAACTACTCTTCGTGTACTGTAGTATGTTGAGTTGCATTATATAAGCATGTGTATACAGTTTTGACATGTAGCCATGTACTAAGACAAAACTGAACAATATTTCTGTGCAGGAACGAAATGCTTCATCTGTATGTAGATGTTGCAGAGAAGTTGGTGTCAGATACAAGGTGGCAAATGATATCCAAGAACTAAACAAAAAATTAGAGAGAATTACGCCAACACTGCTCCAGGAACTGTGTAGAGAAGATCGACAAAGCAATATTACTACTCCTCAACATGATGAGTTCATTACTATTGGCAGAAATATCGCAAACGAGTGCGATAATCTCTTTAGGCTACTGCGAGATAACCAAGCTGGTCAATGCCTTTTTGCTATAGTTGGTGCTGTTGGAGTTGGCAAGACCACACTCGCTCAAAAGATATACCATGATACAAGGAATAATTTTAGAACCAGGTTATGGGTGCACGTCTCGAACGACTCAAGGAACCTGGGGATATGGCGGGGGGAGAGTTTCTTGGGAACAGGAGAAACTGCAGTGCAAAGAGTGGTGTTGCGTGAATATTTAATAAATGACAGATACAGAAGGCTGTTGCTGGTGATCGATAATGTGTGGGAAGAGAATGGCTGGAACCAGTTCTTGGGGCAGGATTTCTGTCGCGGTGGAGACACAGTGCTGCTTATGACTACACGACATGAGTGTGTTGCGAGAACCATGGGGATAGCCCGTTGTCACCGTATAAGAAGGCTCAGCGAGGACGATGGTTGGTTGCTGCTTCGCACAACGGCTAACCTTAGAGAAACAGAGGCTACAGGCAACATTCAAGATGTTGGGAGAAGAATCGTGCAAAAATGCAGTGGCCTTCCGGTTGCAGTAAGGACAATCGGGTATCACCTCAGGGGAAAGACCCTAGAAGATGAATGGGAGAGTGTGTACTTGGAGGATTTTGTTGCCACTTACCCAGAGATACGGAACAGCATCGATGCAAGCTACATGAAGTTATCTTATCGCCTCAAGCGTTGTTTCCTTTACTGCTCACTGTACCCAGAGGGTAATGTGATAGAAAAGCAATGCATCATGCAGCAGTGGATTGCAGAAGGGTTCTTTTCTGAAGTACCACTACAAGTACAAGAAGAGGAAGCTGAAAGATGTTACCAGGAACTGATAGACAGATGCCTTCTTCTGCCAGAGGACGAAGCTCATGGTGTGACGGGGGCTAAGATGCTAAACCTCTTCAGATCATTTGCAATTTATCGGTCACAAGATGAGAACTACGTAAGCAATCCTCGTAATATCGGCAGAAATTTCAAACCATGGCGTCTGTGTGTCACAAATGGAGGTAGAGTAGAAGACATCCCAGATGACGCCACAAGCTTAAGGTCACTCTTTTTGTTTGGGAGTCCACAGATTGATGGAAAATCCTTGGAATTTATCTTCAGTAAGTTAACAAGCCTAAGAGTTCTGGACCTTAGACATACACAAGTTGATAATATTAGCACCTATCTCAAAAAACTACACAAACTCAAGCAACTCAGGTATCTAAACCTTTCTAATACTAGGATAAGCTCAATTCCTGCTAGCATTGGGAGTTTGACAATGCTACAATTTTTAATCCTTAAAAATTGCCCACTTCTAGAGTCTCTACCAAGATGTGTTGGCCACTTGAAAAAACTGAGAAGCCTTGATATCTCAGGAACTCCAATGCTAAATGTCATCCAATTCAACCTTCTCGAACTTACAGAACTCAACTGCTTGCAAGGTTTTGTCCCAACCACCTCAGTACAGCAAAACAATAATGGGGATGGTTGGAAATTTGAGGAGGTAAGACCCCTGGGTAATCTGAGGAACCTCCAGATGGTAAAGCTAGAGAGAGCTTCATCGAGCAGAGGCGACCTGGGCCAATTGAATCTGCATGAGAAGCCCAACCTCAAAGAGCTCGAGTTATGTTGCAGCTCTGCTGATCCTCAAAACAGAGACCGTGATGCAGAGCATATAAAAGCTGTCTTTGAGGCACTTAAGCCTGCTCAATGCCTCGTTTCTCTTAAGATAGCTAACTATTATGGCGATCAGTTTCCATCTTGGTTTTCAAATTCCCATCTGACAGTGCTGCAGCGGCTAACCCTTGACCTTGATGACTGCTTACCTAGTTGGGATCTACCACCCCTAGGTCAGATGATGAATCTCAAGTTCCTGAAAATAACAGCTTCCAATCTCTTACCTGATGCCAATAACAGACAACTTCGAGGTGAACCAAGAAACGGCAAGGCATTTCCACGCCTGGAGCAACTGGTCCTAGGCAAGATGGAAAGCCTGGCACCATGGTCGGTTCTTCAGGAGGGTGACTTGCCTTTGCTTCGTGTTTTCCACCTTGATGGATGCTCACAGCTGAATTCAATTCCTTCATGGCTCCAGAGCTGCAGCAAATTGACAAGCATGAAGATAAAAAATATTGATACTCTTCAAGAAATTGCTAGCCTGCCTTCACTCAAGGAACTAGAGGTTCACAATAGTGGCAGGCTACAAACAGTCCTCAACATCCGCAGGCTTGAGGATCTCACAATTTCTGACTGCCCAGTTCTTGCAGCTGTGGATGGTGTTCCTTTGCTGTGCTCTGTGCACATCAAAGAACAGTCTGCCCAGCTACCACAGTGGCTGCAGCAGAAATCGTTCGTACTCAGGAGATTGGATATCATTGGCACCGAGGTGCTACTCGACAGATGCTCCTCGCCTATTGCTCAGTACGGGTCTATCATTCAAGCTTCTGCTGAACATGTTTATGCGAAACTGGTTGATGGTTCGTTCTACTTCTCCTACAACAAAAGTACCAGTAGTTTCCAGAGAAGCCGACGATGCATTGAGCGCCTTACAGTGGATGGTTTACATAACAATGCTGTGCCTCCGGATAATTGGAGAGCATGGATGGTGTACACGCTTTACGCTATCCTGGTGATTGCTTCTTCTTTCCTATTCAGTGGACTTCTGAGACCAATGGATGAAACTCCGCAGCATCCGCAATGAAGAAACGCTTCACGGTGTCAAGCATGCAAGAGCAAAGCATGCTGCTGTTGGACAAGCTACATACAGTAGCTGATGAAGTTCAGTGCCAATCATACATGGTTGGAGGAATCAGGCTGGACTACTGTCTACTGCGATGAATTTTCGATGAATTGGCTTCTTTAAAAGTATAAGCAGCTAAAGTTTTGTTTTGTTCCCATGTTGCAGTAACTCTGTAACTGTGGTCAGGTGTCCTGGTTTTGTGTCAGGGTTGCTTGACCTTTGCTAACATGTATCAGGAAATGATAAAGGAAGAAGGATAGCTTTGCCATTTTTACCAGCATAAAAATATAAAATTTGGCAAACGAGTGAATTTCCAACGAACACTCTAGTTAATTATCTCAGGATTCAGTCTGTTCCATCTTTTGGTTCTTCTTGTTTTTGCCTTCCTTTTCTTTTTGTTAACCTCATTGCTGTAGATGTGGATTCAAGGATTGGAGAGTGCATACAGACCATTTTGTAATCCACGTTCAGAGAGATTGAAATTGATAATTTGGAATTTTGATC
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| CDS seq | ATGGGCGGCGACGGCGACCCCCCTCACCTCGTCTTCTTCCTCCCGGACCACGTTCTCGTCTTCCTCCTTTCAGATCCTGGCATCTCCATCCTCTCCGCGCCGGCTAGGCTACCTCTCGAGGCCACCGCCTCCACCGGAGCTCATGCCGACCGCCGTTGCAGCCGGAGCATCCCACTTCGACCGCCGCCGGCGCTGCCGGATCTACTGGGGGCCTGCTTCTGGTTCGAACGAAATGCTTCATCTGTATGTAGATGTTGCAGAGAAGTTGGTGTCAGATACAAGGTGGCAAATGATATCCAAGAACTAAACAAAAAATTAGAGAGAATTACGCCAACACTGCTCCAGGAACTGTGTAGAGAAGATCGACAAAGCAATATTACTACTCCTCAACATGATGAGTTCATTACTATTGGCAGAAATATCGCAAACGAGTGCGATAATCTCTTTAGGCTACTGCGAGATAACCAAGCTGGTCAATGCCTTTTTGCTATAGTTGGTGCTGTTGGAGTTGGCAAGACCACACTCGCTCAAAAGATATACCATGATACAAGGAATAATTTTAGAACCAGGTTATGGGTGCACGTCTCGAACGACTCAAGGAACCTGGGGATATGGCGGGGGGAGAGTTTCTTGGGAACAGGAGAAACTGCAGTGCAAAGAGTGGTGTTGCGTGAATATTTAATAAATGACAGATACAGAAGGCTGTTGCTGGTGATCGATAATGTGTGGGAAGAGAATGGCTGGAACCAGTTCTTGGGGCAGGATTTCTGTCGCGGTGGAGACACAGTGCTGCTTATGACTACACGACATGAGTGTGTTGCGAGAACCATGGGGATAGCCCGTTGTCACCGTATAAGAAGGCTCAGCGAGGACGATGGTTGGTTGCTGCTTCGCACAACGGCTAACCTTAGAGAAACAGAGGCTACAGGCAACATTCAAGATGTTGGGAGAAGAATCGTGCAAAAATGCAGTGGCCTTCCGGTTGCAGTAAGGACAATCGGGTATCACCTCAGGGGAAAGACCCTAGAAGATGAATGGGAGAGTGTGTACTTGGAGGATTTTGTTGCCACTTACCCAGAGATACGGAACAGCATCGATGCAAGCTACATGAAGTTATCTTATCGCCTCAAGCGTTGTTTCCTTTACTGCTCACTGTACCCAGAGGGTAATGTGATAGAAAAGCAATGCATCATGCAGCAGTGGATTGCAGAAGGGTTCTTTTCTGAAGTACCACTACAAGTACAAGAAGAGGAAGCTGAAAGATGTTACCAGGAACTGATAGACAGATGCCTTCTTCTGCCAGAGGACGAAGCTCATGGTGTGACGGGGGCTAAGATGCTAAACCTCTTCAGATCATTTGCAATTTATCGGTCACAAGATGAGAACTACGTAAGCAATCCTCGTAATATCGGCAGAAATTTCAAACCATGGCGTCTGTGTGTCACAAATGGAGGTAGAGTAGAAGACATCCCAGATGACGCCACAAGCTTAAGGTCACTCTTTTTGTTTGGGAGTCCACAGATTGATGGAAAATCCTTGGAATTTATCTTCAGTAAGTTAACAAGCCTAAGAGTTCTGGACCTTAGACATACACAAGTTGATAATATTAGCACCTATCTCAAAAAACTACACAAACTCAAGCAACTCAGGTATCTAAACCTTTCTAATACTAGGATAAGCTCAATTCCTGCTAGCATTGGGAGTTTGACAATGCTACAATTTTTAATCCTTAAAAATTGCCCACTTCTAGAGTCTCTACCAAGATGTGTTGGCCACTTGAAAAAACTGAGAAGCCTTGATATCTCAGGAACTCCAATGCTAAATGTCATCCAATTCAACCTTCTCGAACTTACAGAACTCAACTGCTTGCAAGGTTTTGTCCCAACCACCTCAGTACAGCAAAACAATAATGGGGATGGTTGGAAATTTGAGGAGGTAAGACCCCTGGGTAATCTGAGGAACCTCCAGATGGTAAAGCTAGAGAGAGCTTCATCGAGCAGAGGCGACCTGGGCCAATTGAATCTGCATGAGAAGCCCAACCTCAAAGAGCTCGAGTTATGTTGCAGCTCTGCTGATCCTCAAAACAGAGACCGTGATGCAGAGCATATAAAAGCTGTCTTTGAGGCACTTAAGCCTGCTCAATGCCTCGTTTCTCTTAAGATAGCTAACTATTATGGCGATCAGTTTCCATCTTGGTTTTCAAATTCCCATCTGACAGTGCTGCAGCGGCTAACCCTTGACCTTGATGACTGCTTACCTAGTTGGGATCTACCACCCCTAGGTCAGATGATGAATCTCAAGTTCCTGAAAATAACAGCTTCCAATCTCTTACCTGATGCCAATAACAGACAACTTCGAGGTGAACCAAGAAACGGCAAGGCATTTCCACGCCTGGAGCAACTGGTCCTAGGCAAGATGGAAAGCCTGGCACCATGGTCGGTTCTTCAGGAGGGTGACTTGCCTTTGCTTCGTGTTTTCCACCTTGATGGATGCTCACAGCTGAATTCAATTCCTTCATGGCTCCAGAGCTGCAGCAAATTGACAAGCATGAAGATAAAAAATATTGATACTCTTCAAGAAATTGCTAGCCTGCCTTCACTCAAGGAACTAGAGGTTCACAATAGTGGCAGGCTACAAACAGTCCTCAACATCCGCAGGCTTGAGGATCTCACAATTTCTGACTGCCCAGTTCTTGCAGCTGTGGATGGTGTTCCTTTGCTGTGCTCTGTGCACATCAAAGAACAGTCTGCCCAGCTACCACAGTGGCTGCAGCAGAAATCGTTCGTACTCAGGAGATTGGATATCATTGGCACCGAGGTGCTACTCGACAGATGCTCCTCGCCTATTGCTCAGTACGGGTCTATCATTCAAGCTTCTGCTGAACATGTTTATGCGAAACTGGTTGATGGTTCGTTCTACTTCTCCTACAACAAAAGTACCAGTAGTTTCCAGAGAAGCCGACGATGCATTGAGCGCCTTACAGTGGATGGTTTACATAACAATGCTGTGCCTCCGGATAATTGGAGAGCATGGATGGTGTACACGCTTTACGCTATCCTGGTGATTGCTTCTTCTTTCCTATTCAGTGGACTTCTGAGACCAATGGATGAAACTCCGCAGCATCCGCAATGA
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| Protein seq | MGGDGDPPHLVFFLPDHVLVFLLSDPGISILSAPARLPLEATASTGAHADRRCSRSIPLRPPPALPDLLGACFWFERNASSVCRCCREVGVRYKVANDIQELNKKLERITPTLLQELCREDRQSNITTPQHDEFITIGRNIANECDNLFRLLRDNQAGQCLFAIVGAVGVGKTTLAQKIYHDTRNNFRTRLWVHVSNDSRNLGIWRGESFLGTGETAVQRVVLREYLINDRYRRLLLVIDNVWEENGWNQFLGQDFCRGGDTVLLMTTRHECVARTMGIARCHRIRRLSEDDGWLLLRTTANLRETEATGNIQDVGRRIVQKCSGLPVAVRTIGYHLRGKTLEDEWESVYLEDFVATYPEIRNSIDASYMKLSYRLKRCFLYCSLYPEGNVIEKQCIMQQWIAEGFFSEVPLQVQEEEAERCYQELIDRCLLLPEDEAHGVTGAKMLNLFRSFAIYRSQDENYVSNPRNIGRNFKPWRLCVTNGGRVEDIPDDATSLRSLFLFGSPQIDGKSLEFIFSKLTSLRVLDLRHTQVDNISTYLKKLHKLKQLRYLNLSNTRISSIPASIGSLTMLQFLILKNCPLLESLPRCVGHLKKLRSLDISGTPMLNVIQFNLLELTELNCLQGFVPTTSVQQNNNGDGWKFEEVRPLGNLRNLQMVKLERASSSRGDLGQLNLHEKPNLKELELCCSSADPQNRDRDAEHIKAVFEALKPAQCLVSLKIANYYGDQFPSWFSNSHLTVLQRLTLDLDDCLPSWDLPPLGQMMNLKFLKITASNLLPDANNRQLRGEPRNGKAFPRLEQLVLGKMESLAPWSVLQEGDLPLLRVFHLDGCSQLNSIPSWLQSCSKLTSMKIKNIDTLQEIASLPSLKELEVHNSGRLQTVLNIRRLEDLTISDCPVLAAVDGVPLLCSVHIKEQSAQLPQWLQQKSFVLRRLDIIGTEVLLDRCSSPIAQYGSIIQASAEHVYAKLVDGSFYFSYNKSTSSFQRSRRCIERLTVDGLHNNAVPPDNWRAWMVYTLYAILVIASSFLFSGLLRPMDETPQHPQ |
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| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_09g0005120 | OsAzu_09g0005120.01 | Chr09 | 8818231 | 8823242 | + | NAM | ||
| CDS seq | ATGGGCGGCGACGGCGACCCCCCTCACCTCGTCTTCTTCCTCCCGGACCACGTTCTCGTCTTCCTCCTTTCAGATCCTGGCATCTCCATCCTCTCCGCGCCGGCTAGGCTACCTCTCGAGGCCACCGCCTCCACCGGAGCTCATGCCGACCGCCGTTGCAGCCGGAGCATCCCACTTCGACCGCCGCCGGCGCTGCCGGATCTACTGGGGGCCTGCTTCTGGTTCGAACGAAATGCTTCATCTGTATGTAGATGTTGCAGAGAAGTTGGTGTCAGATACAAGGTGGCAAATGATATCCAAGAACTAAACAAAAAATTAGAGAGAATTACGCCAACACTGCTCCAGGAACTGTGTAGAGAAGATCGACAAAGCAATATTACTACTCCTCAACATGATGAGTTCATTACTATTGGCAGAAATATCGCAAACGAGTGCGATAATCTCTTTAGGCTACTGCGAGATAACCAAGCTGGTCAATGCCTTTTTGCTATAGTTGGTGCTGTTGGAGTTGGCAAGACCACACTCGCTCAAAAGATATACCATGATACAAGGAATAATTTTAGAACCAGGTTATGGGTGCACGTCTCGAACGACTCAAGGAACCTGGGGATATGGCGGGGGGAGAGTTTCTTGGGAACAGGAGAAACTGCAGTGCAAAGAGTGGTGTTGCGTGAATATTTAATAAATGACAGATACAGAAGGCTGTTGCTGGTGATCGATAATGTGTGGGAAGAGAATGGCTGGAACCAGTTCTTGGGGCAGGATTTCTGTCGCGGTGGAGACACAGTGCTGCTTATGACTACACGACATGAGTGTGTTGCGAGAACCATGGGGATAGCCCGTTGTCACCGTATAAGAAGGCTCAGCGAGGACGATGGTTGGTTGCTGCTTCGCACAACGGCTAACCTTAGAGAAACAGAGGCTACAGGCAACATTCAAGATGTTGGGAGAAGAATCGTGCAAAAATGCAGTGGCCTTCCGGTTGCAGTAAGGACAATCGGGTATCACCTCAGGGGAAAGACCCTAGAAGATGAATGGGAGAGTGTGTACTTGGAGGATTTTGTTGCCACTTACCCAGAGATACGGAACAGCATCGATGCAAGCTACATGAAGTTATCTTATCGCCTCAAGCGTTGTTTCCTTTACTGCTCACTGTACCCAGAGGGTAATGTGATAGAAAAGCAATGCATCATGCAGCAGTGGATTGCAGAAGGGTTCTTTTCTGAAGTACCACTACAAGTACAAGAAGAGGAAGCTGAAAGATGTTACCAGGAACTGATAGACAGATGCCTTCTTCTGCCAGAGGACGAAGCTCATGGTGTGACGGGGGCTAAGATGCTAAACCTCTTCAGATCATTTGCAATTTATCGGTCACAAGATGAGAACTACGTAAGCAATCCTCGTAATATCGGCAGAAATTTCAAACCATGGCGTCTGTGTGTCACAAATGGAGGTAGAGTAGAAGACATCCCAGATGACGCCACAAGCTTAAGGTCACTCTTTTTGTTTGGGAGTCCACAGATTGATGGAAAATCCTTGGAATTTATCTTCAGTAAGTTAACAAGCCTAAGAGTTCTGGACCTTAGACATACACAAGTTGATAATATTAGCACCTATCTCAAAAAACTACACAAACTCAAGCAACTCAGGTATCTAAACCTTTCTAATACTAGGATAAGCTCAATTCCTGCTAGCATTGGGAGTTTGACAATGCTACAATTTTTAATCCTTAAAAATTGCCCACTTCTAGAGTCTCTACCAAGATGTGTTGGCCACTTGAAAAAACTGAGAAGCCTTGATATCTCAGGAACTCCAATGCTAAATGTCATCCAATTCAACCTTCTCGAACTTACAGAACTCAACTGCTTGCAAGGTTTTGTCCCAACCACCTCAGTACAGCAAAACAATAATGGGGATGGTTGGAAATTTGAGGAGGTAAGACCCCTGGGTAATCTGAGGAACCTCCAGATGGTAAAGCTAGAGAGAGCTTCATCGAGCAGAGGCGACCTGGGCCAATTGAATCTGCATGAGAAGCCCAACCTCAAAGAGCTCGAGTTATGTTGCAGCTCTGCTGATCCTCAAAACAGAGACCGTGATGCAGAGCATATAAAAGCTGTCTTTGAGGCACTTAAGCCTGCTCAATGCCTCGTTTCTCTTAAGATAGCTAACTATTATGGCGATCAGTTTCCATCTTGGTTTTCAAATTCCCATCTGACAGTGCTGCAGCGGCTAACCCTTGACCTTGATGACTGCTTACCTAGTTGGGATCTACCACCCCTAGGTCAGATGATGAATCTCAAGTTCCTGAAAATAACAGCTTCCAATCTCTTACCTGATGCCAATAACAGACAACTTCGAGGTGAACCAAGAAACGGCAAGGCATTTCCACGCCTGGAGCAACTGGTCCTAGGCAAGATGGAAAGCCTGGCACCATGGTCGGTTCTTCAGGAGGGTGACTTGCCTTTGCTTCGTGTTTTCCACCTTGATGGATGCTCACAGCTGAATTCAATTCCTTCATGGCTCCAGAGCTGCAGCAAATTGACAAGCATGAAGATAAAAAATATTGATACTCTTCAAGAAATTGCTAGCCTGCCTTCACTCAAGGAACTAGAGGTTCACAATAGTGGCAGGCTACAAACAGTCCTCAACATCCGCAGGCTTGAGGATCTCACAATTTCTGACTGCCCAGTTCTTGCAGCTGTGGATGGTGTTCCTTTGCTGTGCTCTGTGCACATCAAAGAACAGTCTGCCCAGCTACCACAGTGGCTGCAGCAGAAATCGTTCGTACTCAGGAGATTGGATATCATTGGCACCGAGGTGCTACTCGACAGATGCTCCTCGCCTATTGCTCAGTACGGGTCTATCATTCAAGCTTCTGCTGAACATGTTTATGCGAAACTGGTTGATGGTTCGTTCTACTTCTCCTACAACAAAAGTACCAGTAGTTTCCAGAGAAGCCGACGATGCATTGAGCGCCTTACAGTGGATGGTTTACATAACAATGCTGTGCCTCCGGATAATTGGAGAGCATGGATGGTGTACACGCTTTACGCTATCCTGGTGATTGCTTCTTCTTTCCTATTCAGTGGACTTCTGAGACCAATGGATGAAACTCCGCAGCATCCGCAATGA
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| Protein seq | MGGDGDPPHLVFFLPDHVLVFLLSDPGISILSAPARLPLEATASTGAHADRRCSRSIPLRPPPALPDLLGACFWFERNASSVCRCCREVGVRYKVANDIQELNKKLERITPTLLQELCREDRQSNITTPQHDEFITIGRNIANECDNLFRLLRDNQAGQCLFAIVGAVGVGKTTLAQKIYHDTRNNFRTRLWVHVSNDSRNLGIWRGESFLGTGETAVQRVVLREYLINDRYRRLLLVIDNVWEENGWNQFLGQDFCRGGDTVLLMTTRHECVARTMGIARCHRIRRLSEDDGWLLLRTTANLRETEATGNIQDVGRRIVQKCSGLPVAVRTIGYHLRGKTLEDEWESVYLEDFVATYPEIRNSIDASYMKLSYRLKRCFLYCSLYPEGNVIEKQCIMQQWIAEGFFSEVPLQVQEEEAERCYQELIDRCLLLPEDEAHGVTGAKMLNLFRSFAIYRSQDENYVSNPRNIGRNFKPWRLCVTNGGRVEDIPDDATSLRSLFLFGSPQIDGKSLEFIFSKLTSLRVLDLRHTQVDNISTYLKKLHKLKQLRYLNLSNTRISSIPASIGSLTMLQFLILKNCPLLESLPRCVGHLKKLRSLDISGTPMLNVIQFNLLELTELNCLQGFVPTTSVQQNNNGDGWKFEEVRPLGNLRNLQMVKLERASSSRGDLGQLNLHEKPNLKELELCCSSADPQNRDRDAEHIKAVFEALKPAQCLVSLKIANYYGDQFPSWFSNSHLTVLQRLTLDLDDCLPSWDLPPLGQMMNLKFLKITASNLLPDANNRQLRGEPRNGKAFPRLEQLVLGKMESLAPWSVLQEGDLPLLRVFHLDGCSQLNSIPSWLQSCSKLTSMKIKNIDTLQEIASLPSLKELEVHNSGRLQTVLNIRRLEDLTISDCPVLAAVDGVPLLCSVHIKEQSAQLPQWLQQKSFVLRRLDIIGTEVLLDRCSSPIAQYGSIIQASAEHVYAKLVDGSFYFSYNKSTSSFQRSRRCIERLTVDGLHNNAVPPDNWRAWMVYTLYAILVIASSFLFSGLLRPMDETPQHPQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_09g0005120 | OsAzu_09g0005120.02 | Chr09 | 8818156 | 8823237 | + | IsoSeq | ||
| CDS seq | ATGGTGTTCCTTTGCTGTGCTCTGTGCACATCAAAGAACAGTCTGCCCAGCTACCACAGTGGCTGCAGCAGAAATCGTTCGTACTCAGGAGATTGGATATCATTGGCACCGAGGTGCTACTCGACAGATGCTCCTCGCCTATTGCTCAGTACGGGTCTATCATTCAAGCTTCTGCTGAACATGTTTATGCGAAACTGGTTGATGGTTCGTTCTACTTCTCCTACAACAAAAGTACCAGTAGTTTCCAGAGAAGCCGACGATGCATTGAGCGCCTTACAGTGGATGGTTTACATAACAATGCTGTGCCTCCGGATAATTGGAGAGCATGGATGGTGTACACGCTTTACGCTATCC
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| Protein seq | MVFLCCALCTSKNSLPSYHSGCSRNRSYSGDWISLAPRCYSTDAPRLLLSTGLSFKLLLNMFMRNWLMVRSTSPTTKVPVVSREADDALSALQWMVYITMLCLRIIGEHGWCTRFTLS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr09 | 8818451 | 8819793 | + | OsAzu_09g0005120.01 | OsAzu_09g0005120.02,OsAzu_09g0005120.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.101564 | 3.967152 | 0.847083 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0313600 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g14450 | RBH | 0.103936 | 0.079508 | 0.193398 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0313600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0005150 | RBH | 0.0 | 1.448604 | 0.345244 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0005340 | RBH | 0.226241 | 1.179821 | 1.280979 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005140 | RBH | 0.0 | 0.063089 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005350 | RBH | 0.704011 | 4.077123 | 3.028224 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0152000 | RBH | 0.9551855 | 3.626676 | 1.7830705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005510 | RBH | 0.076759 | 0.085114 | 0.179632 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0135000 | RBH | 0.968477 | 1.6807265 | 3.170157 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0005370 | RBH | 0.000000 | 0.107920 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0005280 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0005240 | RBH | 0.0 | 3.389287 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0005130 | RBH | 0.148410 | 0.0 | 0.246525 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0005180 | RBH | 0.091287 | 1.487408 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G005460 | RBH | 0.041709 | 1.642970 | 0.344050 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005290 | RBH | 0.211786 | 4.398188 | 1.022133 |
