Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_08g0017570 | OGI:08062880 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr08:22220439-22222336 | ||||||||
| Gene Symbol | CIPK06, OsCIPK06, CIPK6, OsCIPK6, OsSnRK3.28, SnRK3.28 | ||||||||||
| DNA seq | GGCAAATCACGAGCCACACGCGCATCGCAAGACCAACGCTGAGTTATCGCATCTCGGCATCCGCATCCGCGCGACGACGACGACGAGGAGGACGACGCCGACGCCGACGCCGGAGGCCGTCCGGGGCAAGGGGAATGCGGAGCGATGAGGCGGGCACGAGGCACTGACGCCGCCGTCCAGCGCAAGCTGCGCGGCGGCCGCACCTGCCACCGGAAGCACGTCGAGGACGGGTAGATCCATCTCTTGGTAGTAGATTAGTAGTAGTTAGGTAGATTCTTGAGGAGGAGGAGGAGGAGGATGATGGCGGCGGCGGCGGAGGAGGGGGAGGGGAAGAAGGGCGGCGGCGCGGTGCTGCAGGGGAGGTACGAGATGGGGCGGGTGCTCGGCCACGGCAACTTCGGGCGGGTGCACGTGGCGCGGGACCTGAGGACCGGGAGGAGCGTGGCGGTGAAGGTGGTGGCGAAGGAGAAGGTGGTGCGTGCCGGGATGATGGAGCAGATCAAGCGGGAGATCGCCGTCATGAAGCGCGTCTCCCACCCCAACATCGTCGAGCTCCACGAGGTGATGGCCACGCGCTCCAAGATCTACCTCGCGCTCGAGCTCGTCCGCGGCGGGGAGCTCTTCGGCCGCATCGTCCGCCTCGGCCGCGTCAGGGAGGACGCCGCGCGGCACTACTTCCGGCAGCTCGTCTCCGCCGTCGACTTCTGCCACTCCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTGCTGCTCGACGAGGCCGGGAACCTCAAGGTGGTCGACTTCGGCCTCAGCGCGCTCGCCGACCACGCCCGCGCCGACGGCCTCCTCCACACGCTCTGCGGCACGCCGGGGTACGCCGCGCCCGAGGTGCTCCGCGACAAGGGCTACGACGGCGCCAAGGCCGACCTCTGGTCCTGCGGCGTCATCCTCTACGTGCTCCTCGCCGGGTCCCTCCCGTTCCCCGACGACAACATCGTCACCCTGTACCGGAAGGCCCAGCGCGGCGACTACCGGTGCCCGGCGTGGCTGTCCACCGACGCGCGCCGCCTCATCCCCAGGCTGCTCGACCCCAACCCGACCACCCGCATCAGCGTCGCGCAGCTCGTCGAGACGCCGTGGTTCAAGAAGACGTCCATCTCCAGGCCTGTGAGCATAGAGCTTCCTCCGGCCTTTGCCGATCCTGCTCCGGCTAAGGAGGAGGCCGAGAAGGACGAGCCGGAGACGCTGAACGCGTTCCACCTGATATCACTCTCGGAGGGGTTCGACCTCTCGCCGCTGTTCGAGGGGGACTCGGCCAAGGGGAGGCGGGACGGTGGCATGCTGTTCGCGACGCGGGAGCCAGCGAGCGGCGTGATCTCCCGCCTCGAGGGGGTGGCGGCGCGCGGCGGCGGCCGGATGCGGGTGACCAAGAGCGGCGCCCGCGGCGTGCGCCTGGAGGGCGCGGAGCGCGGCGGGGCCAAGGGCCGCCTCGCCGTGGCCGCCGACATCTTCAGCGTGGCGCCCTCCGTCCTCGTCGTCGACGTCAAGAAGGACGGCGGCGACACGCTCGAGTACCGCTCATTCTGCAGCGAGGAGCTCCGGCCGGCGCTCCAGGACATCGTCTGGGGCGCCGCCACCGACCCAACGCCGACCGCCGCCGTCTGATGCCACCATTGTTAGCGTCCAAAGTCATTGTGTCACAGTAGCCGATGCTGTTCTTCCTCCTCCCGTGCTTGATTCGATAGCGACGTGCATGAACTAGTATCGCTGTTTGGGTGGTGGGGGCAGTTGGCAAGAACAAATCTGTATCTCTGCCTCAAAAGCAACAGCATTTTTTTTCTTTTGCACAAATTGCAATTGTTTTTGTGATGGTCTTTGCTTACATCTGAATATTCCGTGTCTTCTCTGGG
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| CDS seq | ATGATGGCGGCGGCGGCGGAGGAGGGGGAGGGGAAGAAGGGCGGCGGCGCGGTGCTGCAGGGGAGGTACGAGATGGGGCGGGTGCTCGGCCACGGCAACTTCGGGCGGGTGCACGTGGCGCGGGACCTGAGGACCGGGAGGAGCGTGGCGGTGAAGGTGGTGGCGAAGGAGAAGGTGGTGCGTGCCGGGATGATGGAGCAGATCAAGCGGGAGATCGCCGTCATGAAGCGCGTCTCCCACCCCAACATCGTCGAGCTCCACGAGGTGATGGCCACGCGCTCCAAGATCTACCTCGCGCTCGAGCTCGTCCGCGGCGGGGAGCTCTTCGGCCGCATCGTCCGCCTCGGCCGCGTCAGGGAGGACGCCGCGCGGCACTACTTCCGGCAGCTCGTCTCCGCCGTCGACTTCTGCCACTCCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTGCTGCTCGACGAGGCCGGGAACCTCAAGGTGGTCGACTTCGGCCTCAGCGCGCTCGCCGACCACGCCCGCGCCGACGGCCTCCTCCACACGCTCTGCGGCACGCCGGGGTACGCCGCGCCCGAGGTGCTCCGCGACAAGGGCTACGACGGCGCCAAGGCCGACCTCTGGTCCTGCGGCGTCATCCTCTACGTGCTCCTCGCCGGGTCCCTCCCGTTCCCCGACGACAACATCGTCACCCTGTACCGGAAGGCCCAGCGCGGCGACTACCGGTGCCCGGCGTGGCTGTCCACCGACGCGCGCCGCCTCATCCCCAGGCTGCTCGACCCCAACCCGACCACCCGCATCAGCGTCGCGCAGCTCGTCGAGACGCCGTGGTTCAAGAAGACGTCCATCTCCAGGCCTGTGAGCATAGAGCTTCCTCCGGCCTTTGCCGATCCTGCTCCGGCTAAGGAGGAGGCCGAGAAGGACGAGCCGGAGACGCTGAACGCGTTCCACCTGATATCACTCTCGGAGGGGTTCGACCTCTCGCCGCTGTTCGAGGGGGACTCGGCCAAGGGGAGGCGGGACGGTGGCATGCTGTTCGCGACGCGGGAGCCAGCGAGCGGCGTGATCTCCCGCCTCGAGGGGGTGGCGGCGCGCGGCGGCGGCCGGATGCGGGTGACCAAGAGCGGCGCCCGCGGCGTGCGCCTGGAGGGCGCGGAGCGCGGCGGGGCCAAGGGCCGCCTCGCCGTGGCCGCCGACATCTTCAGCGTGGCGCCCTCCGTCCTCGTCGTCGACGTCAAGAAGGACGGCGGCGACACGCTCGAGTACCGCTCATTCTGCAGCGAGGAGCTCCGGCCGGCGCTCCAGGACATCGTCTGGGGCGCCGCCACCGACCCAACGCCGACCGCCGCCGTCTGA
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| Protein seq | MMAAAAEEGEGKKGGGAVLQGRYEMGRVLGHGNFGRVHVARDLRTGRSVAVKVVAKEKVVRAGMMEQIKREIAVMKRVSHPNIVELHEVMATRSKIYLALELVRGGELFGRIVRLGRVREDAARHYFRQLVSAVDFCHSRGVYHRDLKPENLLLDEAGNLKVVDFGLSALADHARADGLLHTLCGTPGYAAPEVLRDKGYDGAKADLWSCGVILYVLLAGSLPFPDDNIVTLYRKAQRGDYRCPAWLSTDARRLIPRLLDPNPTTRISVAQLVETPWFKKTSISRPVSIELPPAFADPAPAKEEAEKDEPETLNAFHLISLSEGFDLSPLFEGDSAKGRRDGGMLFATREPASGVISRLEGVAARGGGRMRVTKSGARGVRLEGAERGGAKGRLAVAADIFSVAPSVLVVDVKKDGGDTLEYRSFCSEELRPALQDIVWGAATDPTPTAAV |
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| Function | CBL-interacting protein kinase 6 [UniProtKB/Swiss-Prot:Q6Z9F4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_08g0017570 | OsAzu_08g0017570.01 | Chr08 | 22220439 | 22222336 | + | NAM | ||
| CDS seq | ATGATGGCGGCGGCGGCGGAGGAGGGGGAGGGGAAGAAGGGCGGCGGCGCGGTGCTGCAGGGGAGGTACGAGATGGGGCGGGTGCTCGGCCACGGCAACTTCGGGCGGGTGCACGTGGCGCGGGACCTGAGGACCGGGAGGAGCGTGGCGGTGAAGGTGGTGGCGAAGGAGAAGGTGGTGCGTGCCGGGATGATGGAGCAGATCAAGCGGGAGATCGCCGTCATGAAGCGCGTCTCCCACCCCAACATCGTCGAGCTCCACGAGGTGATGGCCACGCGCTCCAAGATCTACCTCGCGCTCGAGCTCGTCCGCGGCGGGGAGCTCTTCGGCCGCATCGTCCGCCTCGGCCGCGTCAGGGAGGACGCCGCGCGGCACTACTTCCGGCAGCTCGTCTCCGCCGTCGACTTCTGCCACTCCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTGCTGCTCGACGAGGCCGGGAACCTCAAGGTGGTCGACTTCGGCCTCAGCGCGCTCGCCGACCACGCCCGCGCCGACGGCCTCCTCCACACGCTCTGCGGCACGCCGGGGTACGCCGCGCCCGAGGTGCTCCGCGACAAGGGCTACGACGGCGCCAAGGCCGACCTCTGGTCCTGCGGCGTCATCCTCTACGTGCTCCTCGCCGGGTCCCTCCCGTTCCCCGACGACAACATCGTCACCCTGTACCGGAAGGCCCAGCGCGGCGACTACCGGTGCCCGGCGTGGCTGTCCACCGACGCGCGCCGCCTCATCCCCAGGCTGCTCGACCCCAACCCGACCACCCGCATCAGCGTCGCGCAGCTCGTCGAGACGCCGTGGTTCAAGAAGACGTCCATCTCCAGGCCTGTGAGCATAGAGCTTCCTCCGGCCTTTGCCGATCCTGCTCCGGCTAAGGAGGAGGCCGAGAAGGACGAGCCGGAGACGCTGAACGCGTTCCACCTGATATCACTCTCGGAGGGGTTCGACCTCTCGCCGCTGTTCGAGGGGGACTCGGCCAAGGGGAGGCGGGACGGTGGCATGCTGTTCGCGACGCGGGAGCCAGCGAGCGGCGTGATCTCCCGCCTCGAGGGGGTGGCGGCGCGCGGCGGCGGCCGGATGCGGGTGACCAAGAGCGGCGCCCGCGGCGTGCGCCTGGAGGGCGCGGAGCGCGGCGGGGCCAAGGGCCGCCTCGCCGTGGCCGCCGACATCTTCAGCGTGGCGCCCTCCGTCCTCGTCGTCGACGTCAAGAAGGACGGCGGCGACACGCTCGAGTACCGCTCATTCTGCAGCGAGGAGCTCCGGCCGGCGCTCCAGGACATCGTCTGGGGCGCCGCCACCGACCCAACGCCGACCGCCGCCGTCTGA
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| Protein seq | MMAAAAEEGEGKKGGGAVLQGRYEMGRVLGHGNFGRVHVARDLRTGRSVAVKVVAKEKVVRAGMMEQIKREIAVMKRVSHPNIVELHEVMATRSKIYLALELVRGGELFGRIVRLGRVREDAARHYFRQLVSAVDFCHSRGVYHRDLKPENLLLDEAGNLKVVDFGLSALADHARADGLLHTLCGTPGYAAPEVLRDKGYDGAKADLWSCGVILYVLLAGSLPFPDDNIVTLYRKAQRGDYRCPAWLSTDARRLIPRLLDPNPTTRISVAQLVETPWFKKTSISRPVSIELPPAFADPAPAKEEAEKDEPETLNAFHLISLSEGFDLSPLFEGDSAKGRRDGGMLFATREPASGVISRLEGVAARGGGRMRVTKSGARGVRLEGAERGGAKGRLAVAADIFSVAPSVLVVDVKKDGGDTLEYRSFCSEELRPALQDIVWGAATDPTPTAAV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 4.143160 | 7.738449 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0441100 | RBH | 0.0 | 0.071934 | 2.942179 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g34240 | RBH | 0.076930 | 0.029537 | 1.076316 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0441100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0010480 | RBH | 0.0 | 0.0 | 0.250854 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0017420 | RBH | 0.080190 | 0.0 | 1.589258 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0017370 | RBH | 0.788285 | 4.804734 | 10.689377 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017660 | RBH | 0.0 | 0.073565 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017510 | RBH | 0.086603 | 10.484228 | 19.151461 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0341700 | RBH | 10.600943 | 4.4686815 | 48.1269795 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0017410 | RBH | 0.0 | 0.100186 | 1.006093 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0361800 | RBH | 21.5140665 | 0.719951 | 51.883486 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0016780 | RBH | 0.103491 | 0.075896 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0017050 | RBH | 0.434591 | 3.711455 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0016860 | RBH | 0.0 | 11.831812 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0017680 | RBH | 0.093505 | 0.125250 | 1.971298 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0017090 | RBH | 0.0 | 1.732252 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G017260 | RBH | 0.079104 | 0.897506 | 5.786554 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0017320 | RBH | 0.0 | 0.0 | 9.739962 |
