Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_08g0012340 | OGI:08044130 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr08:15078142-15083054 | ||||||||
| Gene Symbol | BRL3, OsBRL3 | ||||||||||
| DNA seq | CATGCAAATCACAGAACGATGTCATAACATAAGCAATTTCCAACTTACAAAAGCTTGTGTTGTGTTCTTTCTCAGTAGGAAAACATATGTACAAGCATGGGAACTTAGTTCCAAGATATATATACTTGGCTCTACAACTAAAGAGGCAATCTTCTACACAAAAGAAGCCTACAATTGTGTCTGTGTCTCTTCCTGTTATTGTGTATTATGTACATTGACTGAAACCAAAACTGCAAATTCACCTACCAAAAGGGGCTACTTTTCTTTCCTGTAAGTTAAAATGATTAAACTAGTTTACTTACATTCCATTAACAATCAAAATCTGCAAGAACCAGAAGCATTTACACTGATTTTTCAGATGATTCCTCCATGTTTGTTGAATTGAGTGAGAAGTCATCGAGGAAATTGCTGCCCGAGTCAACCTGAAATTCTTTGAACATTGTCATGACCTGGATCATGGTAGGCCTGCGGTTAGGCTGGTCATCCAAGCAGCGGCAAGCAATCTTCAGATACTGATAGAGCTCCAATTCACTAGATGTCGTGGCCATCAATGTAGGATCATATATTTCACTGCATCTGTCCTCCACCATCTGCTTCACCCAGCCAACAAGATTACTGTCACCAAATTCAGTTGGGTCAATCGGTTTCTTCCCTGTGAGGAGCTCCAAGAGCACAACTCCATAGCTGTACACATCGCCCTTGGTTGTGCACCGGAAATCCTGGCAGTACTCAGGTGGCACATATCCAGGTGTTCCTGAAAGCATGCTCACAGTGAGATGTGAATCGAGCGCATTCATGAGTCTCGCCATCCCAAAGTCTGACACATAGGCATCAAAGTTTCCATCAAGCAACACATTGCTGGACTTCATGTCCCGGTGTATGATATGTGGAACACAGCTGTGGTGGAGGAATGCTAGCCCCCTGGCCGAGCCTATTGCGATCTTTTTCCTTGTTGCCCAATTGAGATCCATATTAGCCTCACCCTTGTCATGTAGGACGAAATCTAAGCTGCCATTCTTCATATACTCGTAAACAAGGAGCCGCTCATCACCAATCTTGCAGTAACCTAGCAATGGAACAAGGTTGCGATGCTTGATCTTGCCAATGGTCTCCATCTCTGCGGTGAACTCCCGGTCACCCTGGCCTGTGAAATGCATCAGCTTCTTGACAGCCACAATGTTACCATCCTTGAGTTTGGCCTTGTAAACCTCACCAAACCCTCCTGACCCAATGAGTGTCTCCGCACAAAAGCCATTGGTGGCCTGATGTAGGTCAGAGAAGGTGAGCTTCCTCAATGGATTCTCAAATATGGCCATATTGATGCTCAATGGCTCACCGATACCTGAAAGCTTCCAGCTTGATTTGCTGGATCCTGGGAGGCTCTCAGAGCAACCAGCTTGTATCTCTTTTGTTTTGTTTTTGTGGAACTTCCATAGCTTGTAATGAATAATCAGCAAGGAGAACAGTATGAGCACTGAGAGTGTCACTGCAAGGAACACGCTTTGTCGAGCAAAATTCCTATGCCCATAAGAAGTTTGGGGCAGACCACCTGCGCCTGAATTATGCACACAAGGATTCAAGGGAATACCACAGAGTCCAGAGTTGTTCTCATACCGGGATGCTGGAAATGTGATGAGCTGCCCTGATGTTGGGATTTCACCAGTGAGGTTGTTGTTGGAGACATCAAAATCTGCAAGGAAATGCAGACACCCAAACCCCGGAGGGATGACACCGGTGAGGTGGTTGTGTGAGAGATCAAGTGCACCAATCCCCTTGAGCCCAGTGAATGCATCTGGAATTGCACCGGTAAGTTCATTGTGACCCAAGTTAAGGACCTCAAGATATGTCATGTTCCCGAAGCTCGCTGGAATTGTACCGGTCAAGCTGTTATATGAAAGATCAAGGAAGATCATGCTCCCATTGTTTCTGAAAGTGTATACAGTTGTGCCAGTGTATATCCTTGTGGAGGAGCACAAGTGCACAGCCGGGAAATTGGCAAGGCGGTCTGGCCGAATGTCTAGGAATTCAAACAGAACACCAGCACCAGGGCAGATGTTGCCAGCCTCATTACGGAGGAAAGCAAACTGCTTGCCAGAGACAATTGCTCCGGTGATGAGCCCCGCCTGTGCTGCTAGCTGTGGCGGTATTGTGCCGGTTAACTCATTGCTGTTGAGGTCAAGCCAGATGAGGTTGCTGCAGCTGCCAAGCTCTGCTGGAACCTTGCCAGAGAGTGAATTCTTGTTAAGCTGCAAAATGGCAAGATTCTGGAGGTTGCCGAATCCTGAGGGAATACTCCCAGTCAGGTTGTTGCCGGCAAGTGATAACCAAATGAGATTCACACACCTGGTAATGGACTCAGGGATGTTTCCAGTGAAGCTGTTGTAGCTTATCACCAATGTCTCCAATGCCGTGCTATTGAAGCAGAACTTGTCTGGTATCTCACCGGAGAGATTGTTTGCCCATAAGACCAAATCAACAAGCTTCAGAAGAAACAATATTTCTGGTGGAATCTGACCAACCAGCAGGTTGAAGCTAAGGTCAATAGACTCAAGGTTGACACAATTGCTCAGTGATGATGGCACTGTTCCATTAATGTAATTGTTTGGCAGGAGAAGTTTCCGAAGTGACGGCAATGATGAGCACAGATCCGGCATGATTTCGCCATCAAACTCATTGGATCCAAGATCAATGACTTCAAGCAGAGGGCACCTGGAAGCAAGTGCAGGCAGTGGATTTGCCCCTGTAATATTGTTGAACGGCAGCCGCAACACACGAAGAGAAGAAATGTTGGTGATGACAGTTTCGACGAAGTCCCCAGAGAGCTGGTTGTTGCCAAGATCAAGCACCTGAAGAAACCTACATTGTCCAAAACTTGCAGGCAAGCTGCCAATCAGCTGGTTGCTTGACAAGTCTAGCTCAACCAGCGTTTTGCACAAGATGCTCAGCTTATCCGATATTTCTCCAGTGAATCGGTTGCCCGCTAGTGAGAGTCGCCTCAGTGCTTGCAATTCAACCAAGAACGTCGGTATTGGACCAGACAGAAGCTTGTTCCCAGACATGTCAAGTGCCTCCAATCGACGGCAATCGACAAGACTCCGCGGCAACCCTGTGCTACGTAGTCTGTTGTATGACCAATCAAGCAATGTGAGATTTGCACACCCACCAAATTCATAGTCTGAGATGTCCATGGAGAAGTTGTTACCGGCAATGCTCAAGTATGTCAAATTGGCTGGAGCCATGGCCACAAACCTTGGAGGTAGTACACCGGACATGAGGTTCCATGACAAATCAAGAACAGAAACTTCAGTGCAAGGTGCAAGCCCCGGGAGGCTTCCGGTGAACTGGTTGGCCGAGAGGTTGAGGTACTGAATGCCATGGCAGCCGGTCAGGGAGTAGTTCAGCAAGCCGGCATCCGACAACTGGTTCCGCGACATGTCGAGCCTGCGCAGGGACGGTGGGAACGGGTAGCCGCCACCGGTGAGGGAGTTCCTGGACAGGTTGAGGGTCTGGAGGCCGCCGCAGGACGCCAAGAACGCCCGGGGAAGCGTCCCATTGAAGGTGTTCGACGAAATGTCCACCTCCACGAGCGCGCACGGCGCCGCCCGCCGCGGCGAGCCGTGGCGCGAGAGGTCGCCGTGGAAGGCGTTGCCGCGGAGGTCGAGGCGCCGGAGCGCCGAGAGCGCGAGGAGGGCGTCGAGGCGGAGGCGGCCGGAGAGCGACATGCCGCTGAGGTCGAGCGCCCGGACGCGGCCGGCGGCGCACGAGACGCCGGCCCACGCGCACGGCGAGCCGGGGGTGGTGGAGTTGGCCCAGCCCGCGAGCGCGCCGCCCGGGTCGGCGGCCACGGACGCGTCCTTGAACGCGAGCAGCGCCGCGGCCTCGTCCGCCGCGCCGGCAATGGCGCGAGCCAGGTGAAGCAGCACCACCGCCGCCGCCACAAGCAGCAGCACCGAAGGCGCCGGCGCCACCACGCGAACGGCGGCCATGGCTGCTTCTTGATGCTGAACCAGTTGATTTCTTCACATGGTAAAGAAGACTAGGAGCTTCGATTCGAATCAAACTGCAAAAAAAATTTAAAAAAAAATCATTCGTGTGCAACAACCTGACATAAACTTCGCACCGAATTCAATCTTAATGAAATTACCCAGTTCAATTCTTCAAGAAAATATCGAAGAAACAATTGGGAGAGAACGCCAAACTCGGCGAAAATTTTAGAGAATAAAAGAAACCTCACAGGCGTCAAAAACACCGAAAGAACTCAAACTAAACGAAATGGCTCCAAAATTGTCCAAGAAATCATAAAAAAAAAGTGCTAAGCAAAGCAGCAAAAAAAAAAAAAACCCGGCAATCTTCCCATCAAGAACACTAACACAAACCCTCGCAAAAAGCAACACCGAAAGTCTTTTGCCGCGAAAAGCAAAATCGGAAACACATCGAGGACAAAGAACATATTACAACGGAGAGAGAAGGCGAGAGAAGCAGATTACCTCTCGTCGGCTCAAGTATCTCGTCGGAATCCAACCCCGCATCGAGAAGGGGTAAAGCGGCATGCAGCAGGTAGAGGCGAAGAGGAAGAAGAAGGCGGCCAAGTAGAATACTGTCCTTAGTATTATTTAACTAAGCGAGCAAGAGCAACCGAAGCAGGAGATAGTATTATACTAGTAGAAAAATTTTGGCAAAGATTTCTTTGGACAAAACAAATGGATTTTGGAAAGACTTCATCTTGGACTAAATTTGGAGCATGACGATGCTGAGCTAGCTTTAGCTATGCTGAGAGGAAGAATGGCGGTGCGAATTGAAGTAGACGCGAAGTAAGTTGGGCGCATCCATCCAAAATTGAGCTGAAATTGCTGGGGCAAATTTAAAGGGGTACAGGTAGCTAGCAACGATGATTCTTTCTTCTGCTTGTAGAC
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| CDS seq | ATGGCCGCCGTTCGCGTGGTGGCGCCGGCGCCTTCGGTGCTGCTGCTTGTGGCGGCGGCGGTGGTGCTGCTTCACCTGGCTCGCGCCATTGCCGGCGCGGCGGACGAGGCCGCGGCGCTGCTCGCGTTCAAGGACGCGTCCGTGGCCGCCGACCCGGGCGGCGCGCTCGCGGGCTGGGCCAACTCCACCACCCCCGGCTCGCCGTGCGCGTGGGCCGGCGTCTCGTGCGCCGCCGGCCGCGTCCGGGCGCTCGACCTCAGCGGCATGTCGCTCTCCGGCCGCCTCCGCCTCGACGCCCTCCTCGCGCTCTCGGCGCTCCGGCGCCTCGACCTCCGCGGCAACGCCTTCCACGGCGACCTCTCGCGCCACGGCTCGCCGCGGCGGGCGGCGCCGTGCGCGCTCGTGGAGGTGGACATTTCGTCGAACACCTTCAATGGGACGCTTCCCCGGGCGTTCTTGGCGTCCTGCGGCGGCCTCCAGACCCTCAACCTGTCCAGGAACTCCCTCACCGGTGGCGGCTACCCGTTCCCACCGTCCCTGCGCAGGCTCGACATGTCGCGGAACCAGTTGTCGGATGCCGGCTTGCTGAACTACTCCCTGACCGGCTGCCATGGCATTCAGTACCTCAACCTCTCGGCCAACCAGTTCACCGGAAGCCTCCCGGGGCTTGCACCTTGCACTGAAGTTTCTGTTCTTGATTTGTCATGGAACCTCATGTCCGGTGTACTACCTCCAAGGTTTGTGGCCATGGCTCCAGCCAATTTGACATACTTGAGCATTGCCGGTAACAACTTCTCCATGGACATCTCAGACTATGAATTTGGTGGGTGTGCAAATCTCACATTGCTTGATTGGTCATACAACAGACTACGTAGCACAGGGTTGCCGCGGAGTCTTGTCGATTGCCGTCGATTGGAGGCACTTGACATGTCTGGGAACAAGCTTCTGTCTGGTCCAATACCGACGTTCTTGGTTGAATTGCAAGCACTGAGGCGACTCTCACTAGCGGGCAACCGATTCACTGGAGAAATATCGGATAAGCTGAGCATCTTGTGCAAAACGCTGGTTGAGCTAGACTTGTCAAGCAACCAGCTGATTGGCAGCTTGCCTGCAAGTTTTGGACAATGTAGGTTTCTTCAGGTGCTTGATCTTGGCAACAACCAGCTCTCTGGGGACTTCGTCGAAACTGTCATCACCAACATTTCTTCTCTTCGTGTGTTGCGGCTGCCGTTCAACAATATTACAGGGGCAAATCCACTGCCTGCACTTGCTTCCAGGTGCCCTCTGCTTGAAGTCATTGATCTTGGATCCAATGAGTTTGATGGCGAAATCATGCCGGATCTGTGCTCATCATTGCCGTCACTTCGGAAACTTCTCCTGCCAAACAATTACATTAATGGAACAGTGCCATCATCACTGAGCAATTGTGTCAACCTTGAGTCTATTGACCTTAGCTTCAACCTGCTGGTTGGTCAGATTCCACCAGAAATATTGTTTCTTCTGAAGCTTGTTGATTTGGTCTTATGGGCAAACAATCTCTCCGGTGAGATACCAGACAAGTTCTGCTTCAATAGCACGGCATTGGAGACATTGGTGATAAGCTACAACAGCTTCACTGGAAACATCCCTGAGTCCATTACCAGGTGTGTGAATCTCATTTGGTTATCACTTGCCGGCAACAACCTGACTGGGAGTATTCCCTCAGGATTCGGCAACCTCCAGAATCTTGCCATTTTGCAGCTTAACAAGAATTCACTCTCTGGCAAGGTTCCAGCAGAGCTTGGCAGCTGCAGCAACCTCATCTGGCTTGACCTCAACAGCAATGAGTTAACCGGCACAATACCGCCACAGCTAGCAGCACAGGCGGGGCTCATCACCGGAGCAATTGTCTCTGGCAAGCAGTTTGCTTTCCTCCGTAATGAGGCTGGCAACATCTGCCCTGGTGCTGGTGTTCTGTTTGAATTCCTAGACATTCGGCCAGACCGCCTTGCCAATTTCCCGGCTGTGCACTTGTGCTCCTCCACAAGGATATACACTGGCACAACTGTATACACTTTCAGAAACAATGGGAGCATGATCTTCCTTGATCTTTCATATAACAGCTTGACCGGTACAATTCCAGCGAGCTTCGGGAACATGACATATCTTGAGGTCCTTAACTTGGGTCACAATGAACTTACCGGTGCAATTCCAGATGCATTCACTGGGCTCAAGGGGATTGGTGCACTTGATCTCTCACACAACCACCTCACCGGTGTCATCCCTCCGGGGTTTGGGTGTCTGCATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTCACTGGTGAAATCCCAACATCAGGGCAGCTCATCACATTTCCAGCATCCCGGTATGAGAACAACTCTGGACTCTGTGGTATTCCCTTGAATCCTTGTGTGCATAATTCAGGCGCAGGTGGTCTGCCCCAAACTTCTTATGGGCATAGGAATTTTGCTCGACAAAGCGTGTTCCTTGCAGTGACACTCTCAGTGCTCATACTGTTCTCCTTGCTGATTATTCATTACAAGCTATGGAAGTTCCACAAAAACAAAACAAAAGAGATACAAGCTGGTTGCTCTGAGAGCCTCCCAGGATCCAGCAAATCAAGCTGGAAGCTTTCAGGTATCGGTGAGCCATTGAGCATCAATATGGCCATATTTGAGAATCCATTGAGGAAGCTCACCTTCTCTGACCTACATCAGGCCACCAATGGCTTTTGTGCGGAGACACTCATTGGGTCAGGAGGGTTTGGTGAGGTTTACAAGGCCAAACTCAAGGATGGTAACATTGTGGCTGTCAAGAAGCTGATGCATTTCACAGGCCAGGGTGACCGGGAGTTCACCGCAGAGATGGAGACCATTGGCAAGATCAAGCATCGCAACCTTGTTCCATTGCTAGGTTACTGCAAGATTGGTGATGAGCGGCTCCTTGTTTACGAGTATATGAAGAATGGCAGCTTAGATTTCGTCCTACATGACAAGGGTGAGGCTAATATGGATCTCAATTGGGCAACAAGGAAAAAGATCGCAATAGGCTCGGCCAGGGGGCTAGCATTCCTCCACCACAGCTGTGTTCCACATATCATACACCGGGACATGAAGTCCAGCAATGTGTTGCTTGATGGAAACTTTGATGCCTATGTGTCAGACTTTGGGATGGCGAGACTCATGAATGCGCTCGATTCACATCTCACTGTGAGCATGCTTTCAGGAACACCTGGATATGTGCCACCTGAGTACTGCCAGGATTTCCGGTGCACAACCAAGGGCGATGTGTACAGCTATGGAGTTGTGCTCTTGGAGCTCCTCACAGGGAAGAAACCGATTGACCCAACTGAATTTGGTGACAGTAATCTTGTTGGCTGGGTGAAGCAGATGGTGGAGGACAGATGCAGTGAAATATATGATCCTACATTGATGGCCACGACATCTAGTGAATTGGAGCTCTATCAGTATCTGAAGATTGCTTGCCGCTGCTTGGATGACCAGCCTAACCGCAGGCCTACCATGATCCAGGTCATGACAATGTTCAAAGAATTTCAGGTTGACTCGGGCAGCAATTTCCTCGATGACTTCTCACTCAATTCAACAAACATGGAGGAATCATCTGAAAAATCAGTGTAA
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| Protein seq | MAAVRVVAPAPSVLLLVAAAVVLLHLARAIAGAADEAAALLAFKDASVAADPGGALAGWANSTTPGSPCAWAGVSCAAGRVRALDLSGMSLSGRLRLDALLALSALRRLDLRGNAFHGDLSRHGSPRRAAPCALVEVDISSNTFNGTLPRAFLASCGGLQTLNLSRNSLTGGGYPFPPSLRRLDMSRNQLSDAGLLNYSLTGCHGIQYLNLSANQFTGSLPGLAPCTEVSVLDLSWNLMSGVLPPRFVAMAPANLTYLSIAGNNFSMDISDYEFGGCANLTLLDWSYNRLRSTGLPRSLVDCRRLEALDMSGNKLLSGPIPTFLVELQALRRLSLAGNRFTGEISDKLSILCKTLVELDLSSNQLIGSLPASFGQCRFLQVLDLGNNQLSGDFVETVITNISSLRVLRLPFNNITGANPLPALASRCPLLEVIDLGSNEFDGEIMPDLCSSLPSLRKLLLPNNYINGTVPSSLSNCVNLESIDLSFNLLVGQIPPEILFLLKLVDLVLWANNLSGEIPDKFCFNSTALETLVISYNSFTGNIPESITRCVNLIWLSLAGNNLTGSIPSGFGNLQNLAILQLNKNSLSGKVPAELGSCSNLIWLDLNSNELTGTIPPQLAAQAGLITGAIVSGKQFAFLRNEAGNICPGAGVLFEFLDIRPDRLANFPAVHLCSSTRIYTGTTVYTFRNNGSMIFLDLSYNSLTGTIPASFGNMTYLEVLNLGHNELTGAIPDAFTGLKGIGALDLSHNHLTGVIPPGFGCLHFLADFDVSNNNLTGEIPTSGQLITFPASRYENNSGLCGIPLNPCVHNSGAGGLPQTSYGHRNFARQSVFLAVTLSVLILFSLLIIHYKLWKFHKNKTKEIQAGCSESLPGSSKSSWKLSGIGEPLSINMAIFENPLRKLTFSDLHQATNGFCAETLIGSGGFGEVYKAKLKDGNIVAVKKLMHFTGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKNGSLDFVLHDKGEANMDLNWATRKKIAIGSARGLAFLHHSCVPHIIHRDMKSSNVLLDGNFDAYVSDFGMARLMNALDSHLTVSMLSGTPGYVPPEYCQDFRCTTKGDVYSYGVVLLELLTGKKPIDPTEFGDSNLVGWVKQMVEDRCSEIYDPTLMATTSSELELYQYLKIACRCLDDQPNRRPTMIQVMTMFKEFQVDSGSNFLDDFSLNSTNMEESSEKSV |
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| Function | Brassinosteroid LRR receptor kinase BRL3 [UniProtKB/Swiss-Prot:Q6ZCZ2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_08g0012340 | OsAzu_08g0012340.01 | Chr08 | 15078142 | 15082127 | - | NAM | ||
| CDS seq | ATGGCCGCCGTTCGCGTGGTGGCGCCGGCGCCTTCGGTGCTGCTGCTTGTGGCGGCGGCGGTGGTGCTGCTTCACCTGGCTCGCGCCATTGCCGGCGCGGCGGACGAGGCCGCGGCGCTGCTCGCGTTCAAGGACGCGTCCGTGGCCGCCGACCCGGGCGGCGCGCTCGCGGGCTGGGCCAACTCCACCACCCCCGGCTCGCCGTGCGCGTGGGCCGGCGTCTCGTGCGCCGCCGGCCGCGTCCGGGCGCTCGACCTCAGCGGCATGTCGCTCTCCGGCCGCCTCCGCCTCGACGCCCTCCTCGCGCTCTCGGCGCTCCGGCGCCTCGACCTCCGCGGCAACGCCTTCCACGGCGACCTCTCGCGCCACGGCTCGCCGCGGCGGGCGGCGCCGTGCGCGCTCGTGGAGGTGGACATTTCGTCGAACACCTTCAATGGGACGCTTCCCCGGGCGTTCTTGGCGTCCTGCGGCGGCCTCCAGACCCTCAACCTGTCCAGGAACTCCCTCACCGGTGGCGGCTACCCGTTCCCACCGTCCCTGCGCAGGCTCGACATGTCGCGGAACCAGTTGTCGGATGCCGGCTTGCTGAACTACTCCCTGACCGGCTGCCATGGCATTCAGTACCTCAACCTCTCGGCCAACCAGTTCACCGGAAGCCTCCCGGGGCTTGCACCTTGCACTGAAGTTTCTGTTCTTGATTTGTCATGGAACCTCATGTCCGGTGTACTACCTCCAAGGTTTGTGGCCATGGCTCCAGCCAATTTGACATACTTGAGCATTGCCGGTAACAACTTCTCCATGGACATCTCAGACTATGAATTTGGTGGGTGTGCAAATCTCACATTGCTTGATTGGTCATACAACAGACTACGTAGCACAGGGTTGCCGCGGAGTCTTGTCGATTGCCGTCGATTGGAGGCACTTGACATGTCTGGGAACAAGCTTCTGTCTGGTCCAATACCGACGTTCTTGGTTGAATTGCAAGCACTGAGGCGACTCTCACTAGCGGGCAACCGATTCACTGGAGAAATATCGGATAAGCTGAGCATCTTGTGCAAAACGCTGGTTGAGCTAGACTTGTCAAGCAACCAGCTGATTGGCAGCTTGCCTGCAAGTTTTGGACAATGTAGGTTTCTTCAGGTGCTTGATCTTGGCAACAACCAGCTCTCTGGGGACTTCGTCGAAACTGTCATCACCAACATTTCTTCTCTTCGTGTGTTGCGGCTGCCGTTCAACAATATTACAGGGGCAAATCCACTGCCTGCACTTGCTTCCAGGTGCCCTCTGCTTGAAGTCATTGATCTTGGATCCAATGAGTTTGATGGCGAAATCATGCCGGATCTGTGCTCATCATTGCCGTCACTTCGGAAACTTCTCCTGCCAAACAATTACATTAATGGAACAGTGCCATCATCACTGAGCAATTGTGTCAACCTTGAGTCTATTGACCTTAGCTTCAACCTGCTGGTTGGTCAGATTCCACCAGAAATATTGTTTCTTCTGAAGCTTGTTGATTTGGTCTTATGGGCAAACAATCTCTCCGGTGAGATACCAGACAAGTTCTGCTTCAATAGCACGGCATTGGAGACATTGGTGATAAGCTACAACAGCTTCACTGGAAACATCCCTGAGTCCATTACCAGGTGTGTGAATCTCATTTGGTTATCACTTGCCGGCAACAACCTGACTGGGAGTATTCCCTCAGGATTCGGCAACCTCCAGAATCTTGCCATTTTGCAGCTTAACAAGAATTCACTCTCTGGCAAGGTTCCAGCAGAGCTTGGCAGCTGCAGCAACCTCATCTGGCTTGACCTCAACAGCAATGAGTTAACCGGCACAATACCGCCACAGCTAGCAGCACAGGCGGGGCTCATCACCGGAGCAATTGTCTCTGGCAAGCAGTTTGCTTTCCTCCGTAATGAGGCTGGCAACATCTGCCCTGGTGCTGGTGTTCTGTTTGAATTCCTAGACATTCGGCCAGACCGCCTTGCCAATTTCCCGGCTGTGCACTTGTGCTCCTCCACAAGGATATACACTGGCACAACTGTATACACTTTCAGAAACAATGGGAGCATGATCTTCCTTGATCTTTCATATAACAGCTTGACCGGTACAATTCCAGCGAGCTTCGGGAACATGACATATCTTGAGGTCCTTAACTTGGGTCACAATGAACTTACCGGTGCAATTCCAGATGCATTCACTGGGCTCAAGGGGATTGGTGCACTTGATCTCTCACACAACCACCTCACCGGTGTCATCCCTCCGGGGTTTGGGTGTCTGCATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTCACTGGTGAAATCCCAACATCAGGGCAGCTCATCACATTTCCAGCATCCCGGTATGAGAACAACTCTGGACTCTGTGGTATTCCCTTGAATCCTTGTGTGCATAATTCAGGCGCAGGTGGTCTGCCCCAAACTTCTTATGGGCATAGGAATTTTGCTCGACAAAGCGTGTTCCTTGCAGTGACACTCTCAGTGCTCATACTGTTCTCCTTGCTGATTATTCATTACAAGCTATGGAAGTTCCACAAAAACAAAACAAAAGAGATACAAGCTGGTTGCTCTGAGAGCCTCCCAGGATCCAGCAAATCAAGCTGGAAGCTTTCAGGTATCGGTGAGCCATTGAGCATCAATATGGCCATATTTGAGAATCCATTGAGGAAGCTCACCTTCTCTGACCTACATCAGGCCACCAATGGCTTTTGTGCGGAGACACTCATTGGGTCAGGAGGGTTTGGTGAGGTTTACAAGGCCAAACTCAAGGATGGTAACATTGTGGCTGTCAAGAAGCTGATGCATTTCACAGGCCAGGGTGACCGGGAGTTCACCGCAGAGATGGAGACCATTGGCAAGATCAAGCATCGCAACCTTGTTCCATTGCTAGGTTACTGCAAGATTGGTGATGAGCGGCTCCTTGTTTACGAGTATATGAAGAATGGCAGCTTAGATTTCGTCCTACATGACAAGGGTGAGGCTAATATGGATCTCAATTGGGCAACAAGGAAAAAGATCGCAATAGGCTCGGCCAGGGGGCTAGCATTCCTCCACCACAGCTGTGTTCCACATATCATACACCGGGACATGAAGTCCAGCAATGTGTTGCTTGATGGAAACTTTGATGCCTATGTGTCAGACTTTGGGATGGCGAGACTCATGAATGCGCTCGATTCACATCTCACTGTGAGCATGCTTTCAGGAACACCTGGATATGTGCCACCTGAGTACTGCCAGGATTTCCGGTGCACAACCAAGGGCGATGTGTACAGCTATGGAGTTGTGCTCTTGGAGCTCCTCACAGGGAAGAAACCGATTGACCCAACTGAATTTGGTGACAGTAATCTTGTTGGCTGGGTGAAGCAGATGGTGGAGGACAGATGCAGTGAAATATATGATCCTACATTGATGGCCACGACATCTAGTGAATTGGAGCTCTATCAGTATCTGAAGATTGCTTGCCGCTGCTTGGATGACCAGCCTAACCGCAGGCCTACCATGATCCAGGTCATGACAATGTTCAAAGAATTTCAGGTTGACTCGGGCAGCAATTTCCTCGATGACTTCTCACTCAATTCAACAAACATGGAGGAATCATCTGAAAAATCAGTGTAA
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| Protein seq | MAAVRVVAPAPSVLLLVAAAVVLLHLARAIAGAADEAAALLAFKDASVAADPGGALAGWANSTTPGSPCAWAGVSCAAGRVRALDLSGMSLSGRLRLDALLALSALRRLDLRGNAFHGDLSRHGSPRRAAPCALVEVDISSNTFNGTLPRAFLASCGGLQTLNLSRNSLTGGGYPFPPSLRRLDMSRNQLSDAGLLNYSLTGCHGIQYLNLSANQFTGSLPGLAPCTEVSVLDLSWNLMSGVLPPRFVAMAPANLTYLSIAGNNFSMDISDYEFGGCANLTLLDWSYNRLRSTGLPRSLVDCRRLEALDMSGNKLLSGPIPTFLVELQALRRLSLAGNRFTGEISDKLSILCKTLVELDLSSNQLIGSLPASFGQCRFLQVLDLGNNQLSGDFVETVITNISSLRVLRLPFNNITGANPLPALASRCPLLEVIDLGSNEFDGEIMPDLCSSLPSLRKLLLPNNYINGTVPSSLSNCVNLESIDLSFNLLVGQIPPEILFLLKLVDLVLWANNLSGEIPDKFCFNSTALETLVISYNSFTGNIPESITRCVNLIWLSLAGNNLTGSIPSGFGNLQNLAILQLNKNSLSGKVPAELGSCSNLIWLDLNSNELTGTIPPQLAAQAGLITGAIVSGKQFAFLRNEAGNICPGAGVLFEFLDIRPDRLANFPAVHLCSSTRIYTGTTVYTFRNNGSMIFLDLSYNSLTGTIPASFGNMTYLEVLNLGHNELTGAIPDAFTGLKGIGALDLSHNHLTGVIPPGFGCLHFLADFDVSNNNLTGEIPTSGQLITFPASRYENNSGLCGIPLNPCVHNSGAGGLPQTSYGHRNFARQSVFLAVTLSVLILFSLLIIHYKLWKFHKNKTKEIQAGCSESLPGSSKSSWKLSGIGEPLSINMAIFENPLRKLTFSDLHQATNGFCAETLIGSGGFGEVYKAKLKDGNIVAVKKLMHFTGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKNGSLDFVLHDKGEANMDLNWATRKKIAIGSARGLAFLHHSCVPHIIHRDMKSSNVLLDGNFDAYVSDFGMARLMNALDSHLTVSMLSGTPGYVPPEYCQDFRCTTKGDVYSYGVVLLELLTGKKPIDPTEFGDSNLVGWVKQMVEDRCSEIYDPTLMATTSSELELYQYLKIACRCLDDQPNRRPTMIQVMTMFKEFQVDSGSNFLDDFSLNSTNMEESSEKSV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_08g0012340 | OsAzu_08g0012340.02 | Chr08 | 15078184 | 15083054 | - | IsoSeq | ||
| CDS seq | ATGAACTTACCGGTGCAATTCCAGATGCATTCACTGGGCTCAAGGGGATTGGTGCACTTGATCTCTCACACAACCACCTCACCGGTGTCATCCCTCCGGGGTTTGGGTGTCTGCATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTCACTGGTGAAATCCCAACATCAGGGCAGCTCATCACATTTCCAGCATCCCGGTATGAGAACAACTCTGGACTCTGTGGTATTC
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| Protein seq | MNLPVQFQMHSLGSRGLVHLISHTTTSPVSSLRGLGVCISLQILMSPTTTSLVKSQHQGSSSHFQHPGMRTTLDSVVF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.152634 | 4.935353 | 2.464606 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0342300 | RBH | 0.167451 | 0.352093 | 0.802821 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g25380 | RBH | 0.103448 | 0.274333 | 0.228820 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0342300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0004410 | RBH | 0.000000 | 16.838720 | 1.860261 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0012460 | RBH | 0.0 | 1.883211 | 0.320162 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0012530 | RBH | 0.105656 | 2.196544 | 2.159375 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0012450 | RBH | 0.0 | 0.066494 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0012290 | RBH | 0.262430 | 5.188197 | 1.412653 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0237600 | RBH | 0.5617045 | 5.012293 | 0.962063 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0012390 | RBH | 0.024256 | 0.177084 | 0.185173 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0251900 | RBH | 0.9962085 | 14.033555 | 2.407668 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0011870 | RBH | 0.027576 | 0.121844 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0012060 | RBH | 0.091301 | 1.514681 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0011940 | RBH | 0.586647 | 8.706030 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0012720 | RBH | 0.092417 | 0.835274 | 0.227978 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0011940 | RBH | 0.059196 | 2.303288 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G012140 | RBH | 0.157086 | 0.668912 | 0.355232 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0012080 | RBH | 0.119139 | 5.929524 | 0.982547 |
