Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_08g0005870 | OGI:08013690 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr08:5387535-5392729 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CAAAACAATCATATATCATTCCATATAGAGTACCATACATGTATATAGTACAACCGTATATACTCGCACGGAGCATATTACTCTACATGATAACCGCACCCCGTGTACAAATTAAGCAGTTAACAATCCACAAAGACGCTCATACATGCAATTTACACATTGTCGTACAATGAATAGTGCAGATAGTTACATAGATAATATTGGGAAACAAATTTTAATCAGTGATATCCGCCCATATATTTTTTTTCTTTTAAATTCAATACAAATAATTATAAAAAATTTGAAAAAAAATGAATAGTCCATCATGTATTTTTTTTCTCCCAAATTCAATACAAATAGTTATAAAAAATTTGAAAAAAAATGAATAGTGACATTTATAGTCCAAAAATTAAAGTTTAAATTCAACATACCCATTGAGAAAAAAATAAAAATTCTATTAACACTGTCAATTTTTTTTGAAACTTTTCATAATTATTTAGATGATTTTAAATAAATAAGGGAGGTTCCCGCAAGATATCAAAATAGTTTCCCTACCAACGTTTATATATAATATCCTTATATTGTTTTTAATTTTCAGTACCCCATGTATTACCATCAGCATGATACCAGTACGACGGTCATGTACGATACCATACTGACGTCACCCATTTTTTTTCATTTTAAACCCAAGCAATACTTTATTATTGTACTTGCTCTGATTTTAGTACTCCCTCTATTTGGGGGCAGTCATCACCCTCCTCTTGGACATCTTGCCATGCACCACGTGGATGTGTTCGTTGTCTTGGTTGTCCATGAAATTCTTCAACTCCTCCGAATCATGGATGGTGAGGAGCTCCAGCTTCGGCGCCATCTTCACCGGGAACGTGTTCAGCTTCCCGCATTGGAAGACGGACACGTGCCGGAGCTGCGGCAGCGCGCCGCCGCCGTCTCCGACGACGTCTCCGGCCGCCGCCGCCGCCGCCGCGGTGCACTCTGTCAGCTTGTCTAGGCTGGTGAGCTGCAGCTTCCTCAGCTTGGGGAACCCGGCGGCGGGGAACCTCATGTAGGGCTTGACGTAGGACGCCTCGTCGAGCACGAGCTCGGCGAGGTTGGGGAGCTTGGCGATGGCGTCGATGAGGGGTTGGTCGCACTCTGATCTGTGCAGCTCGAGCTTGGTGAGGTTTGGGAGGAGGTAATGGTGGTGGTGGTGGCCTTGCAATGTCGGCGTCGTCGTCGTCGTCGTCGTCGTCTCCGGTGGCGGCGGGTTCCATGGCGCCACCCTGCCTCGTAGCGTGAGGTACTCGAGCTGCCTCAGGCCAAGCATGGTGAGGAGGTCCCAGAGCGGGAGCGTCGTCACGGCGTCGTCCGCCGCCTCGAGGTCCAGCGACCGCAGGCACTCCAGCCCGGCCAGAGCTGACGACAGCCACTCGCCGCCGCCGCCGGCGGCGGCGGCGGCGGAGACGTTCCACGCCATGAGCGACCGCAGGCTGGTCATCTTCCCGATGGCGCCGCCGCCGCCGCTCCGAGCCCACGGGCCCCACGCCACGCCGTGGAGCGTCTGCAGGTCCGGGAGCACGGCGCGGTCGTCCGGCGCGGACCAGGCGGCGAGCCGCCTCGCCATGACGTGGCGGAGCGAGGGGTTGCGCCAGAGCCGCCACGGCAGCACCTCGACGTCCGTGCGCGACACGTCCAGCGTCTGCAGGTTCCGGAGCCTCTTGACGGAGCTCGGGAGGTGCCTCATGGCGGTGTGCGAGAGGCCCAGGTACCTGAGGTGGATCAGCCACCCGATCTCCTCCGGCAGCGACTCCCGGTGCGGCAGCCGCACGCCCTTGAGATCCATCACGCGGAGGAACCTCGAGCCATGGACGGAGAAGGTGGGGGCGCGGCCATTGATGAGCTCGAGCGCTCTCTGCCACGCCGCGGCGCCGGCGGCGTCGTCGGCGGCGCGCTCCGGGATGTCGCAGAGGAGGGTGTGGAGCTTGGGCGCCTCGAGCATGTCGGCGAGGTCGGTGTCGTAGGTGTTCCGGAGCGCGAGGCGGCGGGCGGCGCCGTTGGAGAGGACCGCGGCGCCGCTGTGCACGTGGAGGAAGTTGGTGTCGCGCGCCTCCGCCTGGACGAAGTCGAGCACCGCCTGGTGGATGCTGACGGCGGCGACCCTGCCGCCGCCGGCGTCCGTCTCGACGAGCTGGACGAGGCACCGGGAGATGAGCTCCTTGAGGCACTCCTCGCCGTGCTCCTCCACCGTCTGCCCGTTCTTCGCCTGCATGAACCCCTCGGCGACCCACAGCCGGACCAGCTTCCCGGCGCAGATCGGCGTCTGCGCGGTGAACCCGGCGAAGTAGAGGAAGCACGGCTTCAGATGCGTCGGCAGGTCGTCCATGCACACCGTCAGTATCTTGTCCATCGATGTCGCCATCTGCTTCCTCTTCTTCGTCTTCTTCGTTTGCTCCGTCGATGTCGGCGCCGTCTCGCTATCATCGAGGCTGTCCTTCTTCGGCTCCGCCTCCGGCGGCGTCTGCTCCGGCGATGTCGGGGGTGGCGTATCATCGAGGCTATGGATCACGGCCTCCCATTCATCCTCCTTCTTGGACCTCAAGAGTCCGGCGAGCATGACGATGTTGAGCGGCAGGTTGGAGCCCTTCGTCATGGAGTCCACGAGGCTCTTGAGCTGCTCCATCTTCTTCGGCTCCGGCTCGCCGTGGCCGTACACCCTCCGGCGGAACAGCTCGGCGGCCTGCTCCGGCCGCAGCTTCCCGAGCTCCCTGGTGCGCACGACGCCGCCGCCGCCGGCCACGGGTTGCTCCGACTCCTCGCTGATCTTGACCTGCGTCGTGACGAGCACGCAGCTGCCGGCGAGGCCGCCGGGGAGCGCGGCGAGGAAGAAGGCCCACTCCTCCCTGCTCCGGACGTCGTCGAGCACCACGAGGTACCTCTTCCCCTGGAGCGCGGCGGCGAGGCGCGCCTTGACGAGCCTCTCCGCCTCCATCCCACCCCGGCGCCGCACGTCGTCGTCGGCGGCCTCGCCGCCGAGCTCGTCGTCGCCGGAGGAGGCGTTGGCCTGGCGGATGACGTCGTGGAGGAGGTCGGCGAAGCGGAACTTGCGGGGGACGTGGACCCACGCCGTGCAGGCGAAGTGCTTCCGGATGCTGTTCCTCCGGTAGAGGTAGCTCGCCAGCGTCGTCTTGCCGATGCCGCTCTTGCCGGTGAGGTTGATCACCGTCCTTTGCCGGCTCTGGTCGAGGACCAGCCTCTCGATTTCGTCGTAGTCGCCGATCTTGACCAGGTTGTCTTCGATCTCCAGCTCAGTCAGCGATGACCTGTACGAATGAATGTAATAGTCAAATAAAGTCAATTTACAGTGGATGCACTCCTATCGTCCTATAATCTATGTTATTATTTTCTAATTAAGATATAGATTTTACATTGTTTTTTATTACGTAAAATATAAATCGAGAGTCTCTTGATTTAGTCATAATGAGCTACCCCATCAACTATTATCCGGATATGTGTTAATCTTAAATAATCTTATTTGACTATAGTATAAGTTCATCAGGTAAGTAGAAAAAATATTCCTAACATCAATGCTTCAAATAAAACTTTTCTATTAAATTACTCTCGAAGGAGATCTATAGGTTGCTAATTAGGCAAACCGGTTCAGAATGATATGGATTCGACGATGGCACAATAACTATAGTGGGCCATGCGATGCCTACCCATGTGCTAAGGTCTCAGCCCAAGCATAGCCCAAGACTAGCATAGTTAAATCCTATATACTTATATAGTTTATCCTCATTAAATATAGTTAATGTTGTTTTTCTTTTCTCTCATTAAGCCACATCACCTTAATTATTTCTAGTCTTTGGATGATACATCTATGGTTCAAATTGATTTTTCTTCTTTTCTCATAAAACCATGCAATTTTAATTATTTTTAGGCTCAAAATTAGTTTTGAGCATAAAACCATGATAATCATATTACATATTATTTGTACATATTATACAACTTAATTTTCCGTATCAACGCGGCGGAGTATTCATCTAGTACTTTTACATAGTTATATACTTTTAATATTTAACATTAATATTATTATTGTAAAATGAAATGCATAAATGTTAAAGGCTGTCAATATTCTAAGCAACAGTTGCAAATTAAATAATGAAGTGAGTATATATATGTATATACTCGAACGTACAAGTTCTATAATTTTGAAAGCACATTAATTATTTGATCGAAATCTATTTTTAATTTCTGTTTCATTTTGAAATTTATGCTTGAATTTAAATATTCCCCCTTTTCCCTGTTTGAATTTAAATTTTGGTTTGATACATCCGTTTGGAATTTCCAAAGTTTGGTTTCTCTGATAGTCCGGAAAAAAACTATTCCCTCATTTTTATATTATAAGTCATTTTAACCCATTTTCTTCTAGTCAAACCTTTCTTTAGATTTGATCAAATTTATAGTAAAATTTAGCAGCATCTACGACACTAAATTAGTTTCATTAAATATATTTTGATAATATGTTTGTTTTGTGTTGAAAATATTGTTACTGAACTTAATCAAACTCAAAACGTTTGAACTGAAAAAAAGTCAAAACGATTTACATAAATCTTTATGTTAGTTTTATTTAATTATATATGAGCATATATATTTATACCAGTCAGTGTACTTCTTGCGGTGAGGTTTGGAGGCACAGGGCAGCTTCTCGAGGTTGCACTCCTTGCGCTGCTGCTTCATCTGCTCGATCCGCTTGTTGATGTCCTCGATGCCGTCGAAGATGGCGTGGCGGGCGAAGACGCCGGCGGCGGAGTGGCGGAGCCAGCGGAGGAAGGAGGGGACGTCGAAGCAGCCATGGCAGTGGAGCTCCCCCCGGTGGACGAACTCCTCCAGGAGGTCCTCCGCGTCGTGCGCCAGCTCCCGCGTCTGCCGCACCCACACCTCGATCAGCTCGTCGTAGGCGGCGGCGGCGTCGGCGCCGGTGCCGGAGGAGGAGGAGGAGCCGCGGCGCTTGCGGTCGGCGTCGCGGAGGAAGGTGCGGAGCCACTCGAGCTCGTGGCGGAGGTCGAGCACCTTCTTCCCGACCTCCGTCTGCAGCTTCAGCTCCTGCGCCGCCATCGACTCCAGCTTGTCCACGGCGAACTTCACCACGCCCTCCGTCATCTCCGGCGATCTATTATATTCTCTCTAGTGCTTGATCAATGCAAGTTCGATCTTGATGT
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| CDS seq | ATGACGGAGGGCGTGGTGAAGTTCGCCGTGGACAAGCTGGAGTCGATGGCGGCGCAGGAGCTGAAGCTGCAGACGGAGGTCGGGAAGAAGGTGCTCGACCTCCGCCACGAGCTCGAGTGGCTCCGCACCTTCCTCCGCGACGCCGACCGCAAGCGCCGCGGCTCCTCCTCCTCCTCCGGCACCGGCGCCGACGCCGCCGCCGCCTACGACGAGCTGATCGAGGTGTGGGTGCGGCAGACGCGGGAGCTGGCGCACGACGCGGAGGACCTCCTGGAGGAGTTCGTCCACCGGGGGGAGCTCCACTGCCATGGCTGCTTCGACGTCCCCTCCTTCCTCCGCTGGCTCCGCCACTCCGCCGCCGGCGTCTTCGCCCGCCACGCCATCTTCGACGGCATCGAGGACATCAACAAGCGGATCGAGCAGATGAAGCAGCAGCGCAAGGAGTGCAACCTCGAGAAGCTGCCCTGTGCCTCCAAACCTCACCGCAAGAAGTCATCGCTGACTGAGCTGGAGATCGAAGACAACCTGGTCAAGATCGGCGACTACGACGAAATCGAGAGGCTGGTCCTCGACCAGAGCCGGCAAAGGACGGTGATCAACCTCACCGGCAAGAGCGGCATCGGCAAGACGACGCTGGCGAGCTACCTCTACCGGAGGAACAGCATCCGGAAGCACTTCGCCTGCACGGCGTGGGTCCACGTCCCCCGCAAGTTCCGCTTCGCCGACCTCCTCCACGACGTCATCCGCCAGGCCAACGCCTCCTCCGGCGACGACGAGCTCGGCGGCGAGGCCGCCGACGACGACGTGCGGCGCCGGGGTGGGATGGAGGCGGAGAGGCTCGTCAAGGCGCGCCTCGCCGCCGCGCTCCAGGGGAAGAGGTACCTCGTGGTGCTCGACGACGTCCGGAGCAGGGAGGAGTGGGCCTTCTTCCTCGCCGCGCTCCCCGGCGGCCTCGCCGGCAGCTGCGTGCTCGTCACGACGCAGGTCAAGATCAGCGAGGAGTCGGAGCAACCCGTGGCCGGCGGCGGCGGCGTCGTGCGCACCAGGGAGCTCGGGAAGCTGCGGCCGGAGCAGGCCGCCGAGCTGTTCCGCCGGAGGGTGTACGGCCACGGCGAGCCGGAGCCGAAGAAGATGGAGCAGCTCAAGAGCCTCGTGGACTCCATGACGAAGGGCTCCAACCTGCCGCTCAACATCGTCATGCTCGCCGGACTCTTGAGGTCCAAGAAGGAGGATGAATGGGAGGCCGTGATCCATAGCCTCGATGATACGCCACCCCCGACATCGCCGGAGCAGACGCCGCCGGAGGCGGAGCCGAAGAAGGACAGCCTCGATGATAGCGAGACGGCGCCGACATCGACGGAGCAAACGAAGAAGACGAAGAAGAGGAAGCAGATGGCGACATCGATGGACAAGATACTGACGGTGTGCATGGACGACCTGCCGACGCATCTGAAGCCGTGCTTCCTCTACTTCGCCGGGTTCACCGCGCAGACGCCGATCTGCGCCGGGAAGCTGGTCCGGCTGTGGGTCGCCGAGGGGTTCATGCAGGCGAAGAACGGGCAGACGGTGGAGGAGCACGGCGAGGAGTGCCTCAAGGAGCTCATCTCCCGGTGCCTCGTCCAGCTCGTCGAGACGGACGCCGGCGGCGGCAGGGTCGCCGCCGTCAGCATCCACCAGGCGGTGCTCGACTTCGTCCAGGCGGAGGCGCGCGACACCAACTTCCTCCACGTGCACAGCGGCGCCGCGGTCCTCTCCAACGGCGCCGCCCGCCGCCTCGCGCTCCGGAACACCTACGACACCGACCTCGCCGACATGCTCGAGGCGCCCAAGCTCCACACCCTCCTCTGCGACATCCCGGAGCGCGCCGCCGACGACGCCGCCGGCGCCGCGGCGTGGCAGAGAGCGCTCGAGCTCATCAATGGCCGCGCCCCCACCTTCTCCGTCCATGGCTCGAGGTTCCTCCGCGTGATGGATCTCAAGGGCGTGCGGCTGCCGCACCGGGAGTCGCTGCCGGAGGAGATCGGGTGGCTGATCCACCTCAGGTACCTGGGCCTCTCGCACACCGCCATGAGGCACCTCCCGAGCTCCGTCAAGAGGCTCCGGAACCTGCAGACGCTGGACGTGTCGCGCACGGACGTCGAGGTGCTGCCGTGGCGGCTCTGGCGCAACCCCTCGCTCCGCCACGTCATGGCGAGGCGGCTCGCCGCCTGGTCCGCGCCGGACGACCGCGCCGTGCTCCCGGACCTGCAGACGCTCCACGGCGTGGCGTGGGGCCCGTGGGCTCGGAGCGGCGGCGGCGGCGCCATCGGGAAGATGACCAGCCTGCGGTCGCTCATGGCGTGGAACGTCTCCGCCGCCGCCGCCGCCGGCGGCGGCGGCGAGTGGCTGTCGTCAGCTCTGGCCGGGCTGGAGTGCCTGCGGTCGCTGGACCTCGAGGCGGCGGACGACGCCGTGACGACGCTCCCGCTCTGGGACCTCCTCACCATGCTTGGCCTGAGGCAGCTCGAGTACCTCACGCTACGAGGCAGGGTGGCGCCATGGAACCCGCCGCCACCGGAGACGACGACGACGACGACGACGACGCCGACATTGCAAGGCCACCACCACCACCATTACCTCCTCCCAAACCTCACCAAGCTCGAGCTGCACAGATCAGAGTGCGACCAACCCCTCATCGACGCCATCGCCAAGCTCCCCAACCTCGCCGAGCTCGTGCTCGACGAGGCGTCCTACGTCAAGCCCTACATGAGGTTCCCCGCCGCCGGGTTCCCCAAGCTGAGGAAGCTGCAGCTCACCAGCCTAGACAAGCTGACAGAGTGCACCGCGGCGGCGGCGGCGGCGGCCGGAGACGTCGTCGGAGACGGCGGCGGCGCGCTGCCGCAGCTCCGGCACGTGTCCGTCTTCCAATGCGGGAAGCTGAACACGTTCCCGGTGAAGATGGCGCCGAAGCTGGAGCTCCTCACCATCCATGATTCGGAGGAGTTGAAGAATTTCATGGACAACCAAGACAACGAACACATCCACGTGGTGCATGGCAAGATGTCCAAGAGGAGGGTGATGACTGCCCCCAAATAG
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| Protein seq | MTEGVVKFAVDKLESMAAQELKLQTEVGKKVLDLRHELEWLRTFLRDADRKRRGSSSSSGTGADAAAAYDELIEVWVRQTRELAHDAEDLLEEFVHRGELHCHGCFDVPSFLRWLRHSAAGVFARHAIFDGIEDINKRIEQMKQQRKECNLEKLPCASKPHRKKSSLTELEIEDNLVKIGDYDEIERLVLDQSRQRTVINLTGKSGIGKTTLASYLYRRNSIRKHFACTAWVHVPRKFRFADLLHDVIRQANASSGDDELGGEAADDDVRRRGGMEAERLVKARLAAALQGKRYLVVLDDVRSREEWAFFLAALPGGLAGSCVLVTTQVKISEESEQPVAGGGGVVRTRELGKLRPEQAAELFRRRVYGHGEPEPKKMEQLKSLVDSMTKGSNLPLNIVMLAGLLRSKKEDEWEAVIHSLDDTPPPTSPEQTPPEAEPKKDSLDDSETAPTSTEQTKKTKKRKQMATSMDKILTVCMDDLPTHLKPCFLYFAGFTAQTPICAGKLVRLWVAEGFMQAKNGQTVEEHGEECLKELISRCLVQLVETDAGGGRVAAVSIHQAVLDFVQAEARDTNFLHVHSGAAVLSNGAARRLALRNTYDTDLADMLEAPKLHTLLCDIPERAADDAAGAAAWQRALELINGRAPTFSVHGSRFLRVMDLKGVRLPHRESLPEEIGWLIHLRYLGLSHTAMRHLPSSVKRLRNLQTLDVSRTDVEVLPWRLWRNPSLRHVMARRLAAWSAPDDRAVLPDLQTLHGVAWGPWARSGGGGAIGKMTSLRSLMAWNVSAAAAAGGGGEWLSSALAGLECLRSLDLEAADDAVTTLPLWDLLTMLGLRQLEYLTLRGRVAPWNPPPPETTTTTTTTPTLQGHHHHHYLLPNLTKLELHRSECDQPLIDAIAKLPNLAELVLDEASYVKPYMRFPAAGFPKLRKLQLTSLDKLTECTAAAAAAAGDVVGDGGGALPQLRHVSVFQCGKLNTFPVKMAPKLELLTIHDSEELKNFMDNQDNEHIHVVHGKMSKRRVMTAPK |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_08g0005870 | OsAzu_08g0005870.01 | Chr08 | 5388142 | 5392670 | - | NAM | ||
| CDS seq | ATGACGGAGGGCGTGGTGAAGTTCGCCGTGGACAAGCTGGAGTCGATGGCGGCGCAGGAGCTGAAGCTGCAGACGGAGGTCGGGAAGAAGGTGCTCGACCTCCGCCACGAGCTCGAGTGGCTCCGCACCTTCCTCCGCGACGCCGACCGCAAGCGCCGCGGCTCCTCCTCCTCCTCCGGCACCGGCGCCGACGCCGCCGCCGCCTACGACGAGCTGATCGAGGTGTGGGTGCGGCAGACGCGGGAGCTGGCGCACGACGCGGAGGACCTCCTGGAGGAGTTCGTCCACCGGGGGGAGCTCCACTGCCATGGCTGCTTCGACGTCCCCTCCTTCCTCCGCTGGCTCCGCCACTCCGCCGCCGGCGTCTTCGCCCGCCACGCCATCTTCGACGGCATCGAGGACATCAACAAGCGGATCGAGCAGATGAAGCAGCAGCGCAAGGAGTGCAACCTCGAGAAGCTGCCCTGTGCCTCCAAACCTCACCGCAAGAAGTCATCGCTGACTGAGCTGGAGATCGAAGACAACCTGGTCAAGATCGGCGACTACGACGAAATCGAGAGGCTGGTCCTCGACCAGAGCCGGCAAAGGACGGTGATCAACCTCACCGGCAAGAGCGGCATCGGCAAGACGACGCTGGCGAGCTACCTCTACCGGAGGAACAGCATCCGGAAGCACTTCGCCTGCACGGCGTGGGTCCACGTCCCCCGCAAGTTCCGCTTCGCCGACCTCCTCCACGACGTCATCCGCCAGGCCAACGCCTCCTCCGGCGACGACGAGCTCGGCGGCGAGGCCGCCGACGACGACGTGCGGCGCCGGGGTGGGATGGAGGCGGAGAGGCTCGTCAAGGCGCGCCTCGCCGCCGCGCTCCAGGGGAAGAGGTACCTCGTGGTGCTCGACGACGTCCGGAGCAGGGAGGAGTGGGCCTTCTTCCTCGCCGCGCTCCCCGGCGGCCTCGCCGGCAGCTGCGTGCTCGTCACGACGCAGGTCAAGATCAGCGAGGAGTCGGAGCAACCCGTGGCCGGCGGCGGCGGCGTCGTGCGCACCAGGGAGCTCGGGAAGCTGCGGCCGGAGCAGGCCGCCGAGCTGTTCCGCCGGAGGGTGTACGGCCACGGCGAGCCGGAGCCGAAGAAGATGGAGCAGCTCAAGAGCCTCGTGGACTCCATGACGAAGGGCTCCAACCTGCCGCTCAACATCGTCATGCTCGCCGGACTCTTGAGGTCCAAGAAGGAGGATGAATGGGAGGCCGTGATCCATAGCCTCGATGATACGCCACCCCCGACATCGCCGGAGCAGACGCCGCCGGAGGCGGAGCCGAAGAAGGACAGCCTCGATGATAGCGAGACGGCGCCGACATCGACGGAGCAAACGAAGAAGACGAAGAAGAGGAAGCAGATGGCGACATCGATGGACAAGATACTGACGGTGTGCATGGACGACCTGCCGACGCATCTGAAGCCGTGCTTCCTCTACTTCGCCGGGTTCACCGCGCAGACGCCGATCTGCGCCGGGAAGCTGGTCCGGCTGTGGGTCGCCGAGGGGTTCATGCAGGCGAAGAACGGGCAGACGGTGGAGGAGCACGGCGAGGAGTGCCTCAAGGAGCTCATCTCCCGGTGCCTCGTCCAGCTCGTCGAGACGGACGCCGGCGGCGGCAGGGTCGCCGCCGTCAGCATCCACCAGGCGGTGCTCGACTTCGTCCAGGCGGAGGCGCGCGACACCAACTTCCTCCACGTGCACAGCGGCGCCGCGGTCCTCTCCAACGGCGCCGCCCGCCGCCTCGCGCTCCGGAACACCTACGACACCGACCTCGCCGACATGCTCGAGGCGCCCAAGCTCCACACCCTCCTCTGCGACATCCCGGAGCGCGCCGCCGACGACGCCGCCGGCGCCGCGGCGTGGCAGAGAGCGCTCGAGCTCATCAATGGCCGCGCCCCCACCTTCTCCGTCCATGGCTCGAGGTTCCTCCGCGTGATGGATCTCAAGGGCGTGCGGCTGCCGCACCGGGAGTCGCTGCCGGAGGAGATCGGGTGGCTGATCCACCTCAGGTACCTGGGCCTCTCGCACACCGCCATGAGGCACCTCCCGAGCTCCGTCAAGAGGCTCCGGAACCTGCAGACGCTGGACGTGTCGCGCACGGACGTCGAGGTGCTGCCGTGGCGGCTCTGGCGCAACCCCTCGCTCCGCCACGTCATGGCGAGGCGGCTCGCCGCCTGGTCCGCGCCGGACGACCGCGCCGTGCTCCCGGACCTGCAGACGCTCCACGGCGTGGCGTGGGGCCCGTGGGCTCGGAGCGGCGGCGGCGGCGCCATCGGGAAGATGACCAGCCTGCGGTCGCTCATGGCGTGGAACGTCTCCGCCGCCGCCGCCGCCGGCGGCGGCGGCGAGTGGCTGTCGTCAGCTCTGGCCGGGCTGGAGTGCCTGCGGTCGCTGGACCTCGAGGCGGCGGACGACGCCGTGACGACGCTCCCGCTCTGGGACCTCCTCACCATGCTTGGCCTGAGGCAGCTCGAGTACCTCACGCTACGAGGCAGGGTGGCGCCATGGAACCCGCCGCCACCGGAGACGACGACGACGACGACGACGACGCCGACATTGCAAGGCCACCACCACCACCATTACCTCCTCCCAAACCTCACCAAGCTCGAGCTGCACAGATCAGAGTGCGACCAACCCCTCATCGACGCCATCGCCAAGCTCCCCAACCTCGCCGAGCTCGTGCTCGACGAGGCGTCCTACGTCAAGCCCTACATGAGGTTCCCCGCCGCCGGGTTCCCCAAGCTGAGGAAGCTGCAGCTCACCAGCCTAGACAAGCTGACAGAGTGCACCGCGGCGGCGGCGGCGGCGGCCGGAGACGTCGTCGGAGACGGCGGCGGCGCGCTGCCGCAGCTCCGGCACGTGTCCGTCTTCCAATGCGGGAAGCTGAACACGTTCCCGGTGAAGATGGCGCCGAAGCTGGAGCTCCTCACCATCCATGATTCGGAGGAGTTGAAGAATTTCATGGACAACCAAGACAACGAACACATCCACGTGGTGCATGGCAAGATGTCCAAGAGGAGGGTGATGACTGCCCCCAAATAG
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| Protein seq | MTEGVVKFAVDKLESMAAQELKLQTEVGKKVLDLRHELEWLRTFLRDADRKRRGSSSSSGTGADAAAAYDELIEVWVRQTRELAHDAEDLLEEFVHRGELHCHGCFDVPSFLRWLRHSAAGVFARHAIFDGIEDINKRIEQMKQQRKECNLEKLPCASKPHRKKSSLTELEIEDNLVKIGDYDEIERLVLDQSRQRTVINLTGKSGIGKTTLASYLYRRNSIRKHFACTAWVHVPRKFRFADLLHDVIRQANASSGDDELGGEAADDDVRRRGGMEAERLVKARLAAALQGKRYLVVLDDVRSREEWAFFLAALPGGLAGSCVLVTTQVKISEESEQPVAGGGGVVRTRELGKLRPEQAAELFRRRVYGHGEPEPKKMEQLKSLVDSMTKGSNLPLNIVMLAGLLRSKKEDEWEAVIHSLDDTPPPTSPEQTPPEAEPKKDSLDDSETAPTSTEQTKKTKKRKQMATSMDKILTVCMDDLPTHLKPCFLYFAGFTAQTPICAGKLVRLWVAEGFMQAKNGQTVEEHGEECLKELISRCLVQLVETDAGGGRVAAVSIHQAVLDFVQAEARDTNFLHVHSGAAVLSNGAARRLALRNTYDTDLADMLEAPKLHTLLCDIPERAADDAAGAAAWQRALELINGRAPTFSVHGSRFLRVMDLKGVRLPHRESLPEEIGWLIHLRYLGLSHTAMRHLPSSVKRLRNLQTLDVSRTDVEVLPWRLWRNPSLRHVMARRLAAWSAPDDRAVLPDLQTLHGVAWGPWARSGGGGAIGKMTSLRSLMAWNVSAAAAAGGGGEWLSSALAGLECLRSLDLEAADDAVTTLPLWDLLTMLGLRQLEYLTLRGRVAPWNPPPPETTTTTTTTPTLQGHHHHHYLLPNLTKLELHRSECDQPLIDAIAKLPNLAELVLDEASYVKPYMRFPAAGFPKLRKLQLTSLDKLTECTAAAAAAAGDVVGDGGGALPQLRHVSVFQCGKLNTFPVKMAPKLELLTIHDSEELKNFMDNQDNEHIHVVHGKMSKRRVMTAPK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_08g0005870 | OsAzu_08g0005870.02 | Chr08 | 5387535 | 5392729 | - | IsoSeq | ||
| CDS seq | ATGATACGCCACCCCCGACATCGCCGGAGCAGACGCCGCCGGAGGCGGAGCCGAAGAAGGACAGCCTCGATGATAGCGAGACGGCGCCGACATCGACGGAGCAAACGAAGAAGACGAAGAAGAGGAAGCAGATGGCGACATCGATGGACAAGA |
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| Protein seq | MIRHPRHRRSRRRRRRSRRRTASMIARRRRHRRSKRRRRRRGSRWRHRWTR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr08 | 5390830 | 5392180 | - | OsAzu_08g0005870.02 | OsAzu_08g0005870.01,OsAzu_08g0005870.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.196316 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0190300 | RBH | 0.212151 | 0.360446 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g09110 | RBH | 0.814926 | 0.933673 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0190300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0006120 | RBH | 0.0 | 0.0 | 0.216380 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0005870 | RBH | 0.354143 | 0.0 | 0.250111 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005930 | RBH | 1.173187 | 0.0 | 0.382677 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0005810 | RBH | 0.243371 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0005670 | RBH | 1.498660 | 0.0 | 1.077612 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0079100 | RBH | 2.585649 | 0.035202 | 0.0298145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0005500 | RBH | 0.133472 | 0.0 | 0.317579 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0082600 | RBH | 4.356904 | 0.1305365 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0005560 | RBH | 0.329531 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0005630 | RBH | 0.414301 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0005490 | RBH | 5.587996 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0005790 | RBH | 0.093829 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0005610 | RBH | 0.263677 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G005600 | RBH | 0.522127 | 0.0 | 0.183172 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005480 | RBH | 1.742984 | 0.0 | 0.133760 |
