Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_06g0011220 | OGI:06026540 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr06:9396219-9398517 | ||||||||
| Gene Symbol | prx77, prx78, PRX78, OsPRX78 | ||||||||||
| DNA seq | AGTACTATCCAGCTTGCTTGAAGATTAGTGTTTTTTTTTCTTGTCAACGTACACAATAGTTGGTGCACCAACCAAAGATGTTGCTAAAACCTCATCACAATTCATAATCCATTCCTCATCATGTATATAAATAAAAAGTTTGTGCAAAACCCAGGAGTACCTTATCATGTGTATCTCCATGTAACATACTTGTAGAGTGATGACAAAATGACAACAACGCGTATTATATGTACCAGTACAAGGGCCTCATCATCAAAGCATTTCTTATTTCTAGGACAAGCCAGCCATCAAATTAAAAAGAACAAATGTGCAGTCCTTTTGATTGAGCATGCATATGATCATGTGTTGACAAATCTGCAGTTCTTCCTGACCTCACCACCTGCAGGGTTGGTGATGTTGCCCATCTTGACCATGGAGTCGGAGAACTGCTTGAAGAAGGCGTCGGCGTCGGCCCAGTACTTGCTGACGGTGTCGGCCGTGGAGTAGCCGAGGACGCTGGACCACATCTCCTGGTCGGAGTTGAGGAGGCCCTCGCCGTTGACGAGGGTCCCGAAGTAGGCGTTGTCGAAGGCGGCGGCGGTGTGGCTGTCCATGGCGCTGATGTTGTCGTCGCCGCCGTCCAGGGGGCAGATGTCCTTGAGCTTGCTCAGGTAGGGCTGGGAGATCGGGCTGTACTTGGTCGTCATCTCGTAGTCGCCGTAGATCCTGTCCCGGAAGTTGGCGCACCGGGCGAATCCGATTGTGTGGGATCCTTCGATCAAATTCACAAATTCAACAAGGTTTCAGTTCACAATTTGAGGATTTGATTCATACTTGGGGGTCATCTAATTTCACTGGCATGTAAGTCAGGAGGGTGAATTCTCCATTTCAATCTAAAAGGAGGGGATAGGAGGGTATATGATCAAATTTCACCCTGGATATCACTTAGCGCTTTTCTGTTGCGGGCATGTCGTTTTTTTAGACTAGCCCTGTATATACAGCTGTGTACTTTGTTTCCTCTCTATTAATATACGAGGCAAAGCTTTTGCCCTCCTTTAAAAAAAAACCCTGGATATAATGTCAACTTTTCGAAAGTATTTTTCATGTATAAGGCCACTGGCAGGTGCTAATTTGAATTGAACTAATGATAGAATTGTAGCATTGAAGAGAGAAGAAGAACATACCGACAAGGGCTACCATGTCAGTGGCATCGAGGCCCTTCTCCCAGAACTTGGCAATGAGGGTGACAAGGCCCTGTTGAGCAGTGGGAATGTCCCTGTTTGCTAGGTCCAGGCTTGCCTTCTTGGAGTCCAATCTTCCAACTGGGACATCCCAGTAAGGCCCACCAACCTGCAACACAAATTTCCATTCTGTAATAACATTGATGTGGAATATGCACCGTTCTTTGATTGCTTGCAAGTTCTACATGCTGGCATGATTGCAGGCAAAACAATATGCTAATGGAGACAATGATTTTATGAGGTAATAGATAGTTATTGTGAAACGGGTGCTTGAATTTCTCGATGGTGTATTGAGTTATTCCTGAAATGTATGTCTGCCTGTTCATGTTTTCTTGAATAGAATGTCTAATATGAACCTGATAATAGCGAAAATGAGCTAATGTGTTGCACAACACATGACAAACTCTGTCTGACATAAGTTACTGCTTATGAATCACAATTCTGAACATAGGTATCGTTAGGTTTACCAGCACAACTGCGTCCCTCGCTGCAATGGCAAGCAAGTCTGCACAGGAAACTGTTCCAGGGCACTCAGCTTCCAGCTTCTGCTTGATCTTGTCAACCAGCTCGAACCCCTTCAGCGAGTTGACATTCTGTTCTGCCTTCTTCTCTCCAATCAGGGTCGCAGTGTCGTCAAGCAGCACTGATCCATCGCAACCCTGCAACAGATATATTCACATTTTTTCAGAGAAAACTCTGCAACTCCCACTACGCACATTGAAGTTCAGATGAACAAGATTAGCATCTGTGCAAAGTAAAAGAGAGAAAATGGATTGAATGCTAACCTGAACGAAACAGTCATGGAAATGAAGACGAAGCATCAGAGCTGCATTGCGGGAATCCGCACGCACAGCACATTCCATCTCAGTCCGGACGACATGCTCATAATTCGGGCAGGTCTTTGAGTAGTGCTCCAAGCTCAGGCTTGAAGGGTCCTGAGCCACTAGCAATGGCACGGCCAGGAGCACACAAGCCAGGCAGAGAGCAAATTCCCTGGAGCACAGAACACCTGTAGCCATTTTCTGACCAAAAAAGTTGCAGCTGTTCCTTTCTTTGGATGATCCAGATGTTGTTGTGGG
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| CDS seq | ATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGACGACACTGCGACCCTGATTGGAGAGAAGAAGGCAGAACAGAATGTCAACTCGCTGAAGGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGTTTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCAGTTGTGCTGGTTGGTGGGCCTTACTGGGATGTCCCAGTTGGAAGATTGGACTCCAAGAAGGCAAGCCTGGACCTAGCAAACAGGGACATTCCCACTGCTCAACAGGGCCTTGTCACCCTCATTGCCAAGTTCTGGGAGAAGGGCCTCGATGCCACTGACATGGTAGCCCTTGTCGGATCCCACACAATCGGATTCGCCCGGTGCGCCAACTTCCGGGACAGGATCTACGGCGACTACGAGATGACGACCAAGTACAGCCCGATCTCCCAGCCCTACCTGAGCAAGCTCAAGGACATCTGCCCCCTGGACGGCGGCGACGACAACATCAGCGCCATGGACAGCCACACCGCCGCCGCCTTCGACAACGCCTACTTCGGGACCCTCGTCAACGGCGAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGGCTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAAGCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGA
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| Protein seq | MATGVLCSREFALCLACVLLAVPLLVAQDPSSLSLEHYSKTCPNYEHVVRTEMECAVRADSRNAALMLRLHFHDCFVQGCDGSVLLDDTATLIGEKKAEQNVNSLKGFELVDKIKQKLEAECPGTVSCADLLAIAARDAVVLVGGPYWDVPVGRLDSKKASLDLANRDIPTAQQGLVTLIAKFWEKGLDATDMVALVGSHTIGFARCANFRDRIYGDYEMTTKYSPISQPYLSKLKDICPLDGGDDNISAMDSHTAAAFDNAYFGTLVNGEGLLNSDQEMWSSVLGYSTADTVSKYWADADAFFKQFSDSMVKMGNITNPAGGEVRKNCRFVNT |
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| Function | Peroxidase 11 [UniProtKB/Swiss-Prot:Q96519] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_06g0011220 | OsAzu_06g0011220.01 | Chr06 | 9396219 | 9398517 | - | NAM | ||
| CDS seq | ATGGCTACAGGTGTTCTGTGCTCCAGGGAATTTGCTCTCTGCCTGGCTTGTGTGCTCCTGGCCGTGCCATTGCTAGTGGCTCAGGACCCTTCAAGCCTGAGCTTGGAGCACTACTCAAAGACCTGCCCGAATTATGAGCATGTCGTCCGGACTGAGATGGAATGTGCTGTGCGTGCGGATTCCCGCAATGCAGCTCTGATGCTTCGTCTTCATTTCCATGACTGTTTCGTTCAGGGTTGCGATGGATCAGTGCTGCTTGACGACACTGCGACCCTGATTGGAGAGAAGAAGGCAGAACAGAATGTCAACTCGCTGAAGGGGTTCGAGCTGGTTGACAAGATCAAGCAGAAGCTGGAAGCTGAGTGCCCTGGAACAGTTTCCTGTGCAGACTTGCTTGCCATTGCAGCGAGGGACGCAGTTGTGCTGGTTGGTGGGCCTTACTGGGATGTCCCAGTTGGAAGATTGGACTCCAAGAAGGCAAGCCTGGACCTAGCAAACAGGGACATTCCCACTGCTCAACAGGGCCTTGTCACCCTCATTGCCAAGTTCTGGGAGAAGGGCCTCGATGCCACTGACATGGTAGCCCTTGTCGGATCCCACACAATCGGATTCGCCCGGTGCGCCAACTTCCGGGACAGGATCTACGGCGACTACGAGATGACGACCAAGTACAGCCCGATCTCCCAGCCCTACCTGAGCAAGCTCAAGGACATCTGCCCCCTGGACGGCGGCGACGACAACATCAGCGCCATGGACAGCCACACCGCCGCCGCCTTCGACAACGCCTACTTCGGGACCCTCGTCAACGGCGAGGGCCTCCTCAACTCCGACCAGGAGATGTGGTCCAGCGTCCTCGGCTACTCCACGGCCGACACCGTCAGCAAGTACTGGGCCGACGCCGACGCCTTCTTCAAGCAGTTCTCCGACTCCATGGTCAAGATGGGCAACATCACCAACCCTGCAGGTGGTGAGGTCAGGAAGAACTGCAGATTTGTCAACACATGA
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| Protein seq | MATGVLCSREFALCLACVLLAVPLLVAQDPSSLSLEHYSKTCPNYEHVVRTEMECAVRADSRNAALMLRLHFHDCFVQGCDGSVLLDDTATLIGEKKAEQNVNSLKGFELVDKIKQKLEAECPGTVSCADLLAIAARDAVVLVGGPYWDVPVGRLDSKKASLDLANRDIPTAQQGLVTLIAKFWEKGLDATDMVALVGSHTIGFARCANFRDRIYGDYEMTTKYSPISQPYLSKLKDICPLDGGDDNISAMDSHTAAAFDNAYFGTLVNGEGLLNSDQEMWSSVLGYSTADTVSKYWADADAFFKQFSDSMVKMGNITNPAGGEVRKNCRFVNT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 12.974944 | 0.834863 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0274800 | RBH | 0.0 | 0.0 | 0.958228 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g16350 | RBH | 0.0 | 0.0 | 0.222856 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0274800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011140 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011130 | RBH | 0.0 | 13.208403 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011150 | RBH | 0.107693 | 0.144862 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0011250 | RBH | 1.583717 | 29.662357 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0154200 | RBH | 3.906516 | 2.9794875 | 0.0272515 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0010820 | RBH | 0.0 | 0.121698 | 0.187018 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0151400 | RBH | 2.2313825 | 1.7418775 | 0.0184365 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0011230 | RBH | 0.0 | 0.540549 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011080 | RBH | 0.181313 | 3.003022 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011110 | RBH | 0.0 | 19.204239 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0030990 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011020 | RBH | 0.0 | 2.108718 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G010920 | RBH | 0.000000 | 1.356692 | 1.076915 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011240 | RBH | 0.000000 | 21.161938 | 0.0 |
