Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_05g0002020 OGI:05004670 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr05:1519145-1522001
Gene Symbol OsCRR3, CCR3, SDRLK-36
DNA seq

AATCCGCGCCTTCCTCTCACAAGTCTCCTCTTCTTCTACGTACTCCTCTCCTTCCCCCGCGCAGCCGTACACGACTCCCGATGAGATGACGGCCACCGCCGCCGTCGTCGCCGCCCGCCTCATCCAATGACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGACGTCATCTGCAGAAGGTTCTGTGACACGTCGCCGCCGCCGCCGCCGCCGTCTCCTCGTACGCCGTCGCCGCCGGCGACCCCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCGTTCGCCGTCGTCGGCGCGGTGGGCTGCTTCGCGGGGCTCTGCTCCATCGTCTACTGCCTCCTCTTCGGCTTCTGCAGCCACAAGAAGGTGCACAACTCTGTCCAGCCCAACATCGCCAGCAACAACAACGGCGGCGGCGGCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACGGGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGCCGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCAAGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCAAGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCAAGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACCACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCTACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGTCCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAGTTGAGTAGGATGGATTGATTGAGATTAGTAGCTTCCCTAATTCAAATCCAGAGTTTCAAATTGTGATTAGCCCCGGAAGGAGATTTTAAAATTTGTTGCTTCACTTCATTTTTTTTAGAGGAGAACATCATTTGTGTGATTCTCTCACACATTTTGTTCATGGTGGCTGTACATGATTTTGTATTGAACTGATTTCTCTTTTCATAGATGAGAAAATTTCTCTCTTTTTTTTTCTACTACAAACATTCAACAAGAAACCAACCACATTGATTTCATTCAATTCTTTCGATAATGGAAGCATAAGTGCATAACTAATTCTTTCGATAATGGAAGCATAACTTCTTGCCTCTGC

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CDS seq

ATGACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGACGTCATCTGCAGAAGGTTCTGTGACACGTCGCCGCCGCCGCCGCCGCCGTCTCCTCGTACGCCGTCGCCGCCGGCGACCCCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCGTTCGCCGTCGTCGGCGCGGTGGGCTGCTTCGCGGGGCTCTGCTCCATCGTCTACTGCCTCCTCTTCGGCTTCTGCAGCCACAAGAAGGTGCACAACTCTGTCCAGCCCAACATCGCCAGCAACAACAACGGCGGCGGCGGCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACGGGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGCCGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCAAGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCAAGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCAAGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACCACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCTACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGTCCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAGTTGAGTAGGATGGATTGA

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Protein seq

MTPLLLLLLLPLLLLAPASASTVAIAAGPTACAVAEGNSTVYCASATNSSSSAAVAPFVSFSQVSGGGGAFVCGLQVGGRALFCWPAAAPGQLRRVYNGPGQLSQLAVGGGHVAAYDAAARVIRWWRGGDRFPLWFGGGFASLVSGDDFTCAVETSTSAVRCWGPRGGAVEAGFLNASVSALAAGGSRACGVRRNDGGVLCSGGGVLAPREDLYVDGLAVGDSHACGLLRPNHTAACWSLGGATTTLYYPAVGTAFELLVAGGNLTCGLVSANFSLLCWSRDGLVAAEVNLPPILPGVCVSDNSSCKCGPLPDSGRFCKVSGDVICRRFCDTSPPPPPPSPRTPSPPATPSSRRGVSKGWIAFAVVGAVGCFAGLCSIVYCLLFGFCSHKKVHNSVQPNIASNNNGGGGGGAAAAVGSGAPSPYGSPNGSLGRLRRQLSRVMTRQRSGPSSFKDPAEEFTFAQLAAATKDFAAEAKIGEGSFGTVYRGKLPDGREVAIKRGESGPRARKFQEKETAFRSELAFLSRLHHKHLVGFVGYCEESDERLLVYEYMKNGALYDHLHPKPNGSSSPSPSPVATSWKLRIKILLDASRGIDYLHSYAVPPIIHRDIKSSNILLDGSWVARVSDFGLSLMGPETEEVKHLSMKAAGTVGYMDPEYYGLHHLTVKSDVYGFGVVMLEALTGKRAIFKEAEGGSPVSVVDYAVPSIVAGELSKVLDARAPEPSAHEAEAVELVAYTAVHCVRLEGKDRPAMADIVANLETAVALCEDSATGGGAAGHGNSSSSASLSITSMELSRMD

Function Putative serine/threonine-protein kinase-like protein CCR3 [UniProtKB/Swiss-Prot:Q9LY50]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_05g0002020 OsAzu_05g0002020.01 Chr05 1519145 1522001 + NAM
CDS seq

ATGACCCCGCTCCTCCTCCTCCTCCTCCTCCCCCTTCTCCTCCTCGCCCCGGCCTCCGCCTCCACCGTCGCCATCGCCGCCGGCCCCACCGCCTGCGCCGTCGCGGAGGGAAACTCCACCGTCTACTGCGCCTCCGCCACCAACTCGTCCTCCTCCGCCGCCGTCGCGCCGTTCGTCAGCTTCTCCCAGGTGTCCGGCGGCGGGGGGGCGTTCGTCTGCGGGCTGCAGGTCGGGGGGCGCGCGCTCTTCTGCTGGCCCGCCGCGGCGCCGGGTCAGCTCAGGCGGGTGTACAACGGCCCGGGCCAGCTGTCACAGCTCGCCGTCGGGGGCGGCCATGTCGCGGCGTACGACGCCGCGGCGCGGGTGATACGGTGGTGGCGTGGCGGGGACCGGTTCCCTCTCTGGTTCGGCGGTGGGTTCGCCTCCCTCGTCTCCGGCGACGACTTCACCTGCGCCGTGGAGACGAGCACCTCCGCCGTCCGGTGCTGGGGCCCGCGCGGCGGCGCCGTGGAGGCGGGTTTTCTCAACGCCTCCGTCTCCGCCCTCGCCGCGGGAGGTTCCCGCGCGTGCGGGGTGAGGAGGAACGACGGCGGCGTGCTCTGCTCCGGCGGTGGCGTGCTCGCGCCGCGCGAGGACCTGTACGTGGACGGCCTGGCCGTCGGCGACTCCCACGCGTGCGGCCTCCTCCGGCCGAACCACACCGCCGCGTGCTGGAGCCTCGGGGGCGCCACCACCACGCTCTACTACCCGGCGGTCGGCACGGCGTTCGAGCTCCTCGTCGCCGGCGGTAACCTCACGTGCGGCCTCGTGTCGGCCAACTTCAGCCTGCTCTGCTGGTCGAGGGATGGGTTGGTGGCGGCGGAGGTGAACCTGCCGCCGATCCTCCCCGGCGTCTGCGTCTCCGACAACAGCTCGTGCAAATGCGGCCCGCTCCCGGACTCCGGGAGGTTCTGCAAGGTCTCCGGCGACGTCATCTGCAGAAGGTTCTGTGACACGTCGCCGCCGCCGCCGCCGCCGTCTCCTCGTACGCCGTCGCCGCCGGCGACCCCGAGCTCGAGACGCGGCGTGTCCAAAGGCTGGATCGCGTTCGCCGTCGTCGGCGCGGTGGGCTGCTTCGCGGGGCTCTGCTCCATCGTCTACTGCCTCCTCTTCGGCTTCTGCAGCCACAAGAAGGTGCACAACTCTGTCCAGCCCAACATCGCCAGCAACAACAACGGCGGCGGCGGCGGCGGCGCCGCCGCAGCTGTCGGCAGTGGCGCGCCGAGCCCGTACGGGTCGCCGAACGGGTCGCTCGGCCGCCTGCGGCGGCAGCTGTCGCGCGTGATGACGCGGCAGCGGAGCGGGCCGTCGTCGTTCAAGGACCCCGCCGAGGAGTTCACCTTCGCGCAGCTCGCGGCGGCGACCAAGGACTTCGCGGCGGAGGCCAAGATCGGGGAGGGGAGCTTCGGGACGGTGTACCGCGGCAAGCTCCCCGACGGGCGGGAGGTGGCCATCAAGCGCGGCGAGTCGGGGCCGCGCGCGCGCAAGTTCCAGGAGAAGGAGACGGCGTTCCGGTCGGAGCTGGCCTTCCTCTCGCGGCTCCACCACAAGCACCTCGTCGGCTTCGTCGGCTACTGCGAGGAGAGCGACGAGCGGCTGCTGGTCTACGAGTACATGAAGAACGGCGCGCTCTACGACCACCTCCACCCCAAGCCCAACGGCTCGTCCTCGCCGTCCCCGTCGCCGGTGGCCACGTCGTGGAAGCTGCGCATCAAGATCCTGCTCGACGCGTCGCGCGGCATCGACTACCTCCACTCGTACGCCGTGCCGCCGATCATCCACCGCGACATCAAGTCGTCGAACATCCTGCTCGACGGCAGCTGGGTGGCGCGCGTGTCGGACTTCGGGCTGTCGCTGATGGGGCCGGAGACGGAGGAGGTGAAGCACCTGTCGATGAAGGCCGCCGGGACGGTGGGGTACATGGACCCGGAGTACTACGGCCTCCACCACCTCACCGTCAAGAGCGACGTCTACGGCTTCGGCGTCGTCATGCTCGAGGCGCTCACCGGGAAGCGCGCCATCTTCAAGGAGGCCGAGGGCGGGAGCCCCGTCAGCGTGGTGGACTACGCCGTCCCCAGCATCGTCGCCGGCGAGCTCAGCAAGGTGCTCGACGCCCGCGCGCCGGAGCCGAGCGCGCACGAGGCCGAGGCCGTCGAGCTGGTCGCCTACACGGCGGTGCACTGCGTCCGGCTGGAGGGGAAGGACCGGCCGGCGATGGCGGACATCGTGGCCAACCTCGAGACGGCGGTGGCGCTCTGCGAGGACAGCGCCACCGGCGGCGGCGCCGCCGGCCATGGCAACAGCTCGTCCAGCGCCAGCCTCTCCATCACGTCCATGGAGTTGAGTAGGATGGATTGA

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Protein seq

MTPLLLLLLLPLLLLAPASASTVAIAAGPTACAVAEGNSTVYCASATNSSSSAAVAPFVSFSQVSGGGGAFVCGLQVGGRALFCWPAAAPGQLRRVYNGPGQLSQLAVGGGHVAAYDAAARVIRWWRGGDRFPLWFGGGFASLVSGDDFTCAVETSTSAVRCWGPRGGAVEAGFLNASVSALAAGGSRACGVRRNDGGVLCSGGGVLAPREDLYVDGLAVGDSHACGLLRPNHTAACWSLGGATTTLYYPAVGTAFELLVAGGNLTCGLVSANFSLLCWSRDGLVAAEVNLPPILPGVCVSDNSSCKCGPLPDSGRFCKVSGDVICRRFCDTSPPPPPPSPRTPSPPATPSSRRGVSKGWIAFAVVGAVGCFAGLCSIVYCLLFGFCSHKKVHNSVQPNIASNNNGGGGGGAAAAVGSGAPSPYGSPNGSLGRLRRQLSRVMTRQRSGPSSFKDPAEEFTFAQLAAATKDFAAEAKIGEGSFGTVYRGKLPDGREVAIKRGESGPRARKFQEKETAFRSELAFLSRLHHKHLVGFVGYCEESDERLLVYEYMKNGALYDHLHPKPNGSSSPSPSPVATSWKLRIKILLDASRGIDYLHSYAVPPIIHRDIKSSNILLDGSWVARVSDFGLSLMGPETEEVKHLSMKAAGTVGYMDPEYYGLHHLTVKSDVYGFGVVMLEALTGKRAIFKEAEGGSPVSVVDYAVPSIVAGELSKVLDARAPEPSAHEAEAVELVAYTAVHCVRLEGKDRPAMADIVANLETAVALCEDSATGGGAAGHGNSSSSASLSITSMELSRMD

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.918490 0.664481

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0127300 RBH 0.306755 0.718168 0.341413
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g03620 RBH 0.221802 0.308105 0.056059
Nipponbare | IRGSP 1.0 | RAP-db Os05g0127300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0021690 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0002040 RBH 0.0 3.739183 0.111670
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0002100 RBH 0.0 0.0 0.465795
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0001970 RBH 0.0 0.103199 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0002060 RBH 0.0 11.397996 1.585157
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0024700 RBH 1.496299 69.89349 2.5693555
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0002020 RBH 0.0 0.054956 0.043229
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0025600 RBH 3.9072055 80.702934 2.4674545
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0002010 RBH 0.0 0.158342 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0001950 RBH 0.063978 2.119278 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0002050 RBH 0.0 2.178081 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0002060 RBH 0.0 0.334383 0.079678
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0002070 RBH 0.041412 4.126173 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G001930 RBH 0.0 0.934830 0.123769
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0002080 RBH 0.0 6.498908 0.819937
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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