Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0027720 | OGI:04094470 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:30756235-30758462 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTTCTCTCAGGAGGACGTAGTGGAGCCTGGAGGGGACGAAGTAGCCGGCGGCACGGCGATGTCAGCGGTTGGGATGAAGACGGCGTGCGTGACCGGCGGGAACGGGTATATCGCTTCGGCGCTCATCAAGATGCTGCTTCAGAAGGGATATGCTGTCAACACGACAGTCAGAAACCCTGGTGAGATTCTTCCCCCTTTTTTGTTGTTCATGATTTCAGTTACAGGCTGTGATTAGTTTCATGCCAAAATTAGAAGTTCAATGAAATTAGAACGATGTAATGAAAAAGTTAGAAATTTATGTATGTAGGAAAGTTCGATGTGACGAAAAAGTTGAAAGTTTAAAGAAGAAAAATGAAATCTAAACAGGGCCACAGTCTTTCTCCCATTCAGATTCAAAAATCTTTTGGTCAGAGGTAGTTTATTTGCTGAACTGTCGTCATGAACAATAGAAAAAGTTCTTCTATCTGCACCATATAGAAAATCTTTATATGTTCCAACTGATATAGTGACATATGCTGGAAACGATGGATGCAAATCTTTATGATCTCAATTCTCAAGACAACGCTACGAATTTTCAGAGTTCAGTTTCACATCTGACGATCCTACTCTTGTGTATTCAGATGACATGAGGAAGAATTCCCATCTCAAGGGGTTGGAGGCACTAGGCACCTTGAAGGTCTTCCGTGCCGACCTTGACGAAGATGGCAGCTTCGATGAAGCCGTCAACGGCTGCGATTACGCCTTCCTCGTCGCCGCTCCGGTGAATCTCCAGTCAGAGAATCCTGAGGTGAACAGCTAGCTTAGCTAATTAATCCGGTTTTCTCTAATCGACGTCACAGTTGACAGTTGTCTTGTGTCATCTGATGATAAGCATGCTCTTTAGTCTCTAGTACTGAAATTAATTTGCTCTTAACTTCTACGATGACAAATTAAGCTGGGTTTCCTGCCAACGTTTGATGGCAGAAAGAGATGATTGAAGCCGGCGTCCAAGGAACCCTGAACGTGATGAGATCGTGCCTGAGAGCCGGCACGGTGAAGCGCGTGATTCTGACATCGTCGGCGGCCGCCGTCGCCCTCCGTCCGCTGCAAGGCGGCGTCGGCCATGTCCTGGACGAGTCGTCCTGGTCCGACGTCGACTACCTGACGAGAGAGAAGCCACCATCTTGGGTCACATTCTACTCCTTTCTTTTTTGGTCCTCCATCAAATCATTCATATACATTTTTTACCGGGCTGATGAAAATGACGGCTGGCTGATGCTAGCACACCCCATTGTTTTTGCGTTTGCGTTTTGCAGGCGTATGGTGTCTCGAAGGTGCTTTTGGAGAAGGCGGCGTGCAAATTCGCGGAGGAGAACGACATCAGCCTCATCACCGTGCTCCCGGTGTTCACCTTGGGCGCGGCGCCGACGCCGTTGACCACAACAAGCATCCCAACTACGCTCTCCTTGCTGTCTGGTGAGAGCCTGAGAAACATACGTCAAATTTAAGAAGCTACTCTTTTATTTGTTCAGATTCAAGATATATCACATTTTATATTTGATTTGTTTATTTTAGAATTAAGAGAGTATGTACTTCCATTATGTGTTACGATTGACGTTGTTTCTTTTTCAGGTGATGAGGCGCAGCTAAAAACCCTGAAAGGCCTGGCGGCCACCGGCTCCATTCCGGTGGTTCACGTGGACGACGTCTGCCGCGCCGAGATATTCCTCGCGGAGAAGGAGTCGGCGTCGGGGAGGTACATCTGCAGCAGCCTCAGCACCACCGTGATGGCGCTCGCACGTTTCGCGGCAGCAAAATACCCTCAGTACAACGTCCAAACCGACTGGTACATATACACGAACTGGCACTTTCAGTTTCAACTTTCAAGTGACTGATCGATCGACACATGCATTTCTTGAGAGAACCTGATGAGCCAGCGATAATCTTTGTTTGCTCGTAGTTTCGAAGGGTTCCCTGAGAAGCCGAGAGTGTGCTATTCGTCGGAGAAGCTGACGAGGGAAGGGTTCGAGTTCAAGTGGACGGATCTGGACGAGATATTCGGCGACCTCGTCGAGTACGGCAAGGCCCTGGGGATTCTACCGCACTGAATTGATGGTTGCTCCGTCAATTTGGAGTTTTGGACATAAAAATTCTCTTGTGAAATTGTTAGTCCTCTTGTCTTGTGAAATAAGTCATTGTTGTGTGTTACGGTATGGTAATCTCTTTATGATACGGACCCTTTCACTACC
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| CDS seq | ATGAGGAAGAATTCCCATCTCAAGGGGTTGGAGGCACTAGGCACCTTGAAGGTCTTCCGTGCCGACCTTGACGAAGATGGCAGCTTCGATGAAGCCGTCAACGGCTGCGATTACGCCTTCCTCGTCGCCGCTCCGGTGAATCTCCAGTCAGAGAATCCTGAGAAAGAGATGATTGAAGCCGGCGTCCAAGGAACCCTGAACGTGATGAGATCGTGCCTGAGAGCCGGCACGGTGAAGCGCGTGATTCTGACATCGTCGGCGGCCGCCGTCGCCCTCCGTCCGCTGCAAGGCGGCGTCGGCCATGTCCTGGACGAGTCGTCCTGGTCCGACGTCGACTACCTGACGAGAGAGAAGCCACCATCTTGGGCGTATGGTGTCTCGAAGGTGCTTTTGGAGAAGGCGGCGTGCAAATTCGCGGAGGAGAACGACATCAGCCTCATCACCGTGCTCCCGGCGCAGCTAAAAACCCTGAAAGGCCTGGCGGCCACCGGCTCCATTCCGGTGGTTCACGTGGACGACGTCTGCCGCGCCGAGATATTCCTCGCGGAGAAGGAGTCGGCGTCGGGGAGGTACATCTGCAGCAGCCTCAGCACCACCGTGATGGCGCTCGCACGTTTCGCGGCAGCAAAATACCCTCAGTACAACGTCCAAACCGACTGTTTCGAAGGGTTCCCTGAGAAGCCGAGAGTGTGCTATTCGTCGGAGAAGCTGACGAGGGAAGGGTTCGAGTTCAAGTGGACGGATCTGGACGAGATATTCGGCGACCTCGTCGAGTACGGCAAGGCCCTGGGGATTCTACCGCACTGA
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| Protein seq | MRKNSHLKGLEALGTLKVFRADLDEDGSFDEAVNGCDYAFLVAAPVNLQSENPEKEMIEAGVQGTLNVMRSCLRAGTVKRVILTSSAAAVALRPLQGGVGHVLDESSWSDVDYLTREKPPSWAYGVSKVLLEKAACKFAEENDISLITVLPAQLKTLKGLAATGSIPVVHVDDVCRAEIFLAEKESASGRYICSSLSTTVMALARFAAAKYPQYNVQTDCFEGFPEKPRVCYSSEKLTREGFEFKWTDLDEIFGDLVEYGKALGILPH |
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| Function | Anthocyanidin reductase ((2S)-flavan-3-ol-forming) [UniProtKB/Swiss-Prot:Q5FB34] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0027720 | OsAzu_04g0027720.01 | Chr04 | 30756860 | 30758321 | + | NAM | ||
| CDS seq | ATGAGGAAGAATTCCCATCTCAAGGGGTTGGAGGCACTAGGCACCTTGAAGGTCTTCCGTGCCGACCTTGACGAAGATGGCAGCTTCGATGAAGCCGTCAACGGCTGCGATTACGCCTTCCTCGTCGCCGCTCCGGTGAATCTCCAGTCAGAGAATCCTGAGAAAGAGATGATTGAAGCCGGCGTCCAAGGAACCCTGAACGTGATGAGATCGTGCCTGAGAGCCGGCACGGTGAAGCGCGTGATTCTGACATCGTCGGCGGCCGCCGTCGCCCTCCGTCCGCTGCAAGGCGGCGTCGGCCATGTCCTGGACGAGTCGTCCTGGTCCGACGTCGACTACCTGACGAGAGAGAAGCCACCATCTTGGGCGTATGGTGTCTCGAAGGTGCTTTTGGAGAAGGCGGCGTGCAAATTCGCGGAGGAGAACGACATCAGCCTCATCACCGTGCTCCCGGCGCAGCTAAAAACCCTGAAAGGCCTGGCGGCCACCGGCTCCATTCCGGTGGTTCACGTGGACGACGTCTGCCGCGCCGAGATATTCCTCGCGGAGAAGGAGTCGGCGTCGGGGAGGTACATCTGCAGCAGCCTCAGCACCACCGTGATGGCGCTCGCACGTTTCGCGGCAGCAAAATACCCTCAGTACAACGTCCAAACCGACTGTTTCGAAGGGTTCCCTGAGAAGCCGAGAGTGTGCTATTCGTCGGAGAAGCTGACGAGGGAAGGGTTCGAGTTCAAGTGGACGGATCTGGACGAGATATTCGGCGACCTCGTCGAGTACGGCAAGGCCCTGGGGATTCTACCGCACTGA
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| Protein seq | MRKNSHLKGLEALGTLKVFRADLDEDGSFDEAVNGCDYAFLVAAPVNLQSENPEKEMIEAGVQGTLNVMRSCLRAGTVKRVILTSSAAAVALRPLQGGVGHVLDESSWSDVDYLTREKPPSWAYGVSKVLLEKAACKFAEENDISLITVLPAQLKTLKGLAATGSIPVVHVDDVCRAEIFLAEKESASGRYICSSLSTTVMALARFAAAKYPQYNVQTDCFEGFPEKPRVCYSSEKLTREGFEFKWTDLDEIFGDLVEYGKALGILPH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0027720 | OsAzu_04g0027720.02 | Chr04 | 30756235 | 30758462 | + | IsoSeq | ||
| CDS seq | TTTCTCTCAGGAGGACGTAGTGGAGCCTGGAGGGGACGAAGTAGCCGGCGGCACGGCGATGTCAGCGGTTGGGATGAAGACGGCGTGCGTGACCGGCGGGAACGGGTATATCGCTTCGGCGCTCATCAAGATGCTGCTTCAGAAGGGATATGCTGTCAACACGACAGTCAGAAA |
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| Protein seq | FLSGGRSGAWRGRSSRRHGDVSGWDEDGVRDRRERVYRFGAHQDAASEGICCQHDSQK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.156616 | 17.306736 | 4.177543 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0631000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g53920 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0631000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028500 | RBH | 0.000000 | 0.760544 | 4.581150 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028190 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0027980 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028230 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0506200 | RBH | 11.1147975 | 40.342945 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026920 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0510100 | SBH | 0.01568 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027310 | SBH | 0.0 | 0.064770 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027140 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027200 | RBH | 0.0 | 27.686531 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027780 | SBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027830 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G027120 | SBH | 0.0 | 0.0 | 0.700998 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0027070 | RBH | 0.0 | 0.000000 | 8.159698 |
