Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0023600 | OGI:04085330 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:27437249-27437869 | ||||||||
| Gene Symbol | ERF23, OsERF#023, OsERF023, OsERF23, AP2/EREBP#144, AP2/EREBP144 | ||||||||||
| DNA seq | ATGTCTGACCACGGGCCGCCGCCGCCGCGGTCGTCGGGGAAGCACCCCTTCTACCGAGGGATCAGGAGCCGGAGCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGCGGAAGGCTCGCCGCATCTGGCTCGGCACGTTCCCGACGGCCGAGATGGCCGCCGTCGCCTACGACGTGGCGGCGCGCGCGCTGCGTGGGCCCGACGCGGCGCTCAACTTCCCCGATCTGGCCGCCTCGCGCACCGCGCCACCCGCGTCCAGCTCAGCGGACGACATCCGCGCAGCGGCTGCCGCCGCGGCCGCCTCGCTGCAGCACGACCGTGCCGGCGGCGGCATTGCCCCTGCCGCCTCTGGATCAGCGCACCAGCAGCGCGGCGGGAGCAGTGCCGCCGCGCGCACCACGGCGGGCAGCGGCGGCGCGCAGCAGGAAGGCAGCAGCGGCGCCGGCGCCGGGAGCCACCAGTATTTCTTGGACGAGGAGGCCCTCTTCGAGACGCCGCAGTTCCTGCGGAACATGGCCGCCGGGATGATGATGAGCCCCCCGAGGCTCAGCCCCAGCTCCTCCGACGATTCGCCGGACCCGTCGGAGGCCGGGGGCAGCCTCTGGAGCTACCGTGACCCATAG
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| CDS seq | ATGTCTGACCACGGGCCGCCGCCGCCGCGGTCGTCGGGGAAGCACCCCTTCTACCGAGGGATCAGGAGCCGGAGCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGCGGAAGGCTCGCCGCATCTGGCTCGGCACGTTCCCGACGGCCGAGATGGCCGCCGTCGCCTACGACGTGGCGGCGCGCGCGCTGCGTGGGCCCGACGCGGCGCTCAACTTCCCCGATCTGGCCGCCTCGCGCACCGCGCCACCCGCGTCCAGCTCAGCGGACGACATCCGCGCAGCGGCTGCCGCCGCGGCCGCCTCGCTGCAGCACGACCGTGCCGGCGGCGGCATTGCCCCTGCCGCCTCTGGATCAGCGCACCAGCAGCGCGGCGGGAGCAGTGCCGCCGCGCGCACCACGGCGGGCAGCGGCGGCGCGCAGCAGGAAGGCAGCAGCGGCGCCGGCGCCGGGAGCCACCAGTATTTCTTGGACGAGGAGGCCCTCTTCGAGACGCCGCAGTTCCTGCGGAACATGGCCGCCGGGATGATGATGAGCCCCCCGAGGCTCAGCCCCAGCTCCTCCGACGATTCGCCGGACCCGTCGGAGGCCGGGGGCAGCCTCTGGAGCTACCGTGACCCATAG
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| Protein seq | MSDHGPPPPRSSGKHPFYRGIRSRSGKWVSEIREPRKARRIWLGTFPTAEMAAVAYDVAARALRGPDAALNFPDLAASRTAPPASSSADDIRAAAAAAAASLQHDRAGGGIAPAASGSAHQQRGGSSAAARTTAGSGGAQQEGSSGAGAGSHQYFLDEEALFETPQFLRNMAAGMMMSPPRLSPSSSDDSPDPSEAGGSLWSYRDP |
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| Function | Ethylene-responsive transcription factor ERF025 [UniProtKB/Swiss-Prot:Q9FJ90] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0023600 | OsAzu_04g0023600.01 | Chr04 | 27437249 | 27437869 | + | NAM | ||
| CDS seq | ATGTCTGACCACGGGCCGCCGCCGCCGCGGTCGTCGGGGAAGCACCCCTTCTACCGAGGGATCAGGAGCCGGAGCGGCAAGTGGGTGTCGGAGATCCGGGAGCCGCGGAAGGCTCGCCGCATCTGGCTCGGCACGTTCCCGACGGCCGAGATGGCCGCCGTCGCCTACGACGTGGCGGCGCGCGCGCTGCGTGGGCCCGACGCGGCGCTCAACTTCCCCGATCTGGCCGCCTCGCGCACCGCGCCACCCGCGTCCAGCTCAGCGGACGACATCCGCGCAGCGGCTGCCGCCGCGGCCGCCTCGCTGCAGCACGACCGTGCCGGCGGCGGCATTGCCCCTGCCGCCTCTGGATCAGCGCACCAGCAGCGCGGCGGGAGCAGTGCCGCCGCGCGCACCACGGCGGGCAGCGGCGGCGCGCAGCAGGAAGGCAGCAGCGGCGCCGGCGCCGGGAGCCACCAGTATTTCTTGGACGAGGAGGCCCTCTTCGAGACGCCGCAGTTCCTGCGGAACATGGCCGCCGGGATGATGATGAGCCCCCCGAGGCTCAGCCCCAGCTCCTCCGACGATTCGCCGGACCCGTCGGAGGCCGGGGGCAGCCTCTGGAGCTACCGTGACCCATAG
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| Protein seq | MSDHGPPPPRSSGKHPFYRGIRSRSGKWVSEIREPRKARRIWLGTFPTAEMAAVAYDVAARALRGPDAALNFPDLAASRTAPPASSSADDIRAAAAAAAASLQHDRAGGGIAPAASGSAHQQRGGSSAAARTTAGSGGAQQEGSSGAGAGSHQYFLDEEALFETPQFLRNMAAGMMMSPPRLSPSSSDDSPDPSEAGGSLWSYRDP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0572200 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g48330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0572200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0028850 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0024330 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0024060 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0023820 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0023950 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0451000 | RBH | 0.389241 | 1.3690065 | 0.026422 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022720 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0455000 | RBH | 0.5980705 | 0.1107555 | 0.2034015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0023220 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0023050 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023170 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023570 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0023770 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G023020 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0022910 | RBH | 0.0 | 0.0 | 0.0 |
