Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0013560 | OGI:04065610 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:19819576-19823511 | ||||||||
| Gene Symbol | RLCK151, OsRLCK151 | ||||||||||
| DNA seq | CACCACCACCACCAACCACCCACACCACCTTCCTTTCTCTCCTCCCTCTAATCTTCTCCCCCTCTCCCCACCAAGAAAAATCCAGGCTTTGTATTAGGGACCAGATTAAGCAGAGAACCACCACCTTTTGCCTTTTTGCAGTTTGCTGTTTTCACCTCCTCAAAGAGAAGAAGAAGACACTCCAAATTCTTCACCCCCCACACAACACACATTGTTTCTTCCCAAAAATCCAATCTTTTGGTTTTGGGCCCAATTTGTCCTCCTCTTAAATCCCACTTTTCCATCACTCCATTCTGTCATAAATCCTCTCCTCTTCCCCTCTCAAAGTTCCAGCTTTTCCCACTAAGAAAATCCAATCTTGGCCACTCCATTTATTCGCTGAGCAAATTTCCAGCCTTTTTTGCGCCCAATTCCATTGGGAGATGGAGAAGTAGATTTTAGCGCAAAAAAAATCAGGTTTTTTTGGCACCCGATTTTGGTTGGGAGAGCTCGCCGGAGATCCGCCATTTGAGGTAAGGCGAGGAGCTCTCTCTCCCATGTCGGACTCGGAGCTGTCGCAGAGCACGGTGGTGTTCGGGCTCCACCTGTGGGAGCTCGTCGGCATCGGCGTCGGCGCGGCGTTCGTGCTCCTCCTCGTCCTCCTCTCGCTGCTCTGCCTCGTCGCCTCACGCCGCCGCCGCCGGCGGCGAGGGGTCGCCGTGGCGACCCCCGTGCTCCACCTCGCCACCGCCGTCGCGCCGCCCAAGCACCCCGGCAAGCCGCCCAAGGACATCCAGGAGGTGCCCTCCCGCGCCGCCGCCGCCGCCGCGGCGCCCAAGGCGCAGCCGGCGCAGGTAATCCAGGCGCCGCCGCCGCAGCCGCCGCCGTCGGAATCCATCCAGATCGAGACGGGCAAGGAGCACCGCATCACGTTCCGGGAGCAGCAGCATCAGCCGCCGCAGCCGCCGCCCTACCACCAGCGGAGCGGGGGCCCCTCGTCGCGCGGCGGCAGCGGGGAGAGCCGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGCGGAGCCCGGCGTGCCCGAGGTGTCCCACCTCGGGTGGGGCCACTGGTACACGCTCAAGGAGCTGGAGGACGCGACGGCCATGTTCGCCGACGAGAAGGTGATCGGCGAGGGCGGCTACGGCATCGTGTACCACGGCGTGCTCGAGGACGGCACGCAGGTCGCCGTCAAGAACCTGCTCAACAACAGGTAGTACCTACCACTCTTACCACCTGCTGCTGCTGCTGCTGCTGCTTCCCATGAACTCAAGCATAATAGGGCAAAATGCAGCAGCGTGCGTGTCGAATTGGGTCTCTTTTTTAAGAATGCGTAGGTTCAAGGTTAAGCATTAAGGAAAGGCTTGCTTAGTTTCGTGAGGGCATTAAGCATTACTTGAATGGAGATGTTGACAATTGTAGATGGTGACATTTTTGCTGAGAACTTGGGTAGTAGAGACGATCATGTCGTGTTCCGCACTGAACATTTTCTTATGGTTCACATGCTCTGTGTGGAAGCTGTCGATTTTAGAGGCCGAAATATATGTCGCGTGTGACGTGTGTTGGTTCGTTCTAGTGCTCTCTCTCTGTTGCCAAATTTAGTAAAATTTTGATGCTTGCTTTGTTAGGGGGCAGGCAGAGAGGGAGTTCAAGGTTGAGGTGGAAGCGATTGGGCGGGTGCGGCACAAGAACCTGGTTCGGCTGCTGGGATACTGCGCCGAGGGTAACCAAAGGTACCTTGAAATCAATGGATTCTATGACTGAGTAGCTTGCAATGTATAATATTTTCTGTACGAATCCTTTTCAGGATGCTTGTGTACGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTCCATGGTGATGTTGGTCCCGTAAGCCCTCTCACATGGGATATGAGAATGAAGATTATACTAGGAACAGCAAAAGGGTATGCATCTTTCAGTTCATTACCGTAGACTATAGACATATTGGTAACATTATTTACATTGTGCAGCTTAATGTATCTGCATGAGGGACTTGAGCCAAAGGTGGTTCATCGTGATGTCAAGTCGAGCAACATCCTCCTTGACAAGACCTGGAATGCTAAGCTTTCTGATTTTGGGCTAGCAAAGCTTTTGGGCTCAGAGAGGAGTTATGTAACAACCAGAGTTATGGGGACATTTGGGTTAGAAATTAGCACCCTTGTAATGTGATAATTGTACAAGACACATGAATATTTTGCTTATGCATCTTTTGTTCTTTGCAGGTACGTAGCTCCAGAGTATGCTGGTACTGGCATGTTAAATGAAACTAGTGATGTCTATAGTTTTGGAATTCTTATCATGGAAATAATATCTGGTCGGGTACCAGTGGATTACAACAGACCACCAGGGGAGGTTAGTTATTGTTTGCCTTGTTATAAGGATTCTAAATTAAGATCTTGTCGAATGCATCTATGAAATCAGCACATTAATCCTTTCAGGTTAATCTTGTTGAATGGCTGAAGACAATGGTGAGCAACCGAAACTCTGAAGGGGTTTTGGATCCAAAGATGACTGAGAAGCCTACTTCTAGGGCACTGAAGAAGGCTTTGTTAGTAGCTCTGCGATGTGTAGACCCAGAAGCCCGTAAGAGGCCAAAGATTGGGCATGTCATTCACATGCTTGAAGTTGATGATTTTCCCTACAGAGATGTAAGTTAACGTGGCATGTGGCTCCTTTTGTCTTATGTTCAGTACCCATCATTTTATATAGTGAAAATTGTGAGCATCATTTGCAATGCTTGTGTGGCCCCTAATTCCTCTCGCACAGTTATTTCCAAGGAAAAAATGACATCGTAGTGACCATGTTGAGTTCTGTACACACTATTTAGTTTTAGATTATTATACCAACCCATTTTTGTTTTTCACATATTTTTGAATGTCACCTTTTGGTTCATTGCTGTATTGGTGACTGTTTTTCTTGGACAACGGAAAACATGGTTCCAAAATCTTCATTCCCCAATTTTGAAATGCCCCATCATTCTCCCTGTAAATTATGCATATGAATGACGTGTTCCAAGTCAGTCTTTAAGAAATGACCAAAAAATATTTATTATAATGTGCTTAAATTCCATTTTTAATCTTTTCTGAAAAACAAAAGGCAGGAGCTTTGCCTATATATTAGTAGAGCAGGGAAAAATTCCACTTTTTAGTTGTTGTTATCGCACTGAAATCGTGTACATTATAAACATATATTGTTGTCACTCCTTTTGCCAGGAACGTCGCGGTGGCAAAGCTCCAGGTCAAGTGAAATCGGGAGAAATACCGCCAGTTGAAGCTGGTGATAGCAGCGGGAACAATACGCCAAAAGAAACACCAAAAGGTCAACCGAAAGATGAACCTTTCAAGTGGAGAAATCAAGCGGCGGCCTAGCTATTAGCAAGATGGTGATTCTTCTGAATTCAGTAAGACGACGATTTTTCTGAATTCTTACACCTGATCAAGAAACCGAATGCCGCAAACTTGCAAACAGCTCATTTGCTGCTCGTTAGTTGGGTTGGGGCACGGAAACATGGAACGCGCCGAGATCGTGAGAGCATCTGTACATTATTGGGTTAGTATGTTAGCCATAGCGATTTTTTGGTTGGTTTATTTGGTTATATTTATGTACTAAGTGATAATTCTTGTATGACAAATTCATGTTACTCTTGAGGTAAAAGTTGATGAGCGGTGCTTAGATAAAACCTTCCATGTAGCAATATATCCCCCAAATGCCAGTTTGCTCATCAGTCATCATACAATGCTCAGTTTCTTATACTTTTGAGATCCATACTTGTCACCTAAATTGTGATGATTCAATATACCAGACTGAATCCTCAGGTGTGTGCCCACATTTCTTTTTCCTGTATGTAACAAAATGAAATGAGCAGCACTACAGTAGTCTGAATTTTGCTGTTTCATCAACC
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| CDS seq | ATGTCGGACTCGGAGCTGTCGCAGAGCACGGTGGTGTTCGGGCTCCACCTGTGGGAGCTCGTCGGCATCGGCGTCGGCGCGGCGTTCGTGCTCCTCCTCGTCCTCCTCTCGCTGCTCTGCCTCGTCGCCTCACGCCGCCGCCGCCGGCGGCGAGGGGTCGCCGTGGCGACCCCCGTGCTCCACCTCGCCACCGCCGTCGCGCCGCCCAAGCACCCCGGCAAGCCGCCCAAGGACATCCAGGAGGTGCCCTCCCGCGCCGCCGCCGCCGCCGCGGCGCCCAAGGCGCAGCCGGCGCAGGTAATCCAGGCGCCGCCGCCGCAGCCGCCGCCGTCGGAATCCATCCAGATCGAGACGGGCAAGGAGCACCGCATCACGTTCCGGGAGCAGCAGCATCAGCCGCCGCAGCCGCCGCCCTACCACCAGCGGAGCGGGGGCCCCTCGTCGCGCGGCGGCAGCGGGGAGAGCCGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGCGGAGCCCGGCGTGCCCGAGGTGTCCCACCTCGGGTGGGGCCACTGGTACACGCTCAAGGAGCTGGAGGACGCGACGGCCATGTTCGCCGACGAGAAGGTGATCGGCGAGGGCGGCTACGGCATCGTGTACCACGGCGTGCTCGAGGACGGCACGCAGGTCGCCGTCAAGAACCTGCTCAACAACAGGGGGCAGGCAGAGAGGGAGTTCAAGGTTGAGGTGGAAGCGATTGGGCGGGTGCGGCACAAGAACCTGGTTCGGCTGCTGGGATACTGCGCCGAGGGTAACCAAAGGATGCTTGTGTACGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTCCATGGTGATGTTGGTCCCGTAAGCCCTCTCACATGGGATATGAGAATGAAGATTATACTAGGAACAGCAAAAGGCTTAATGTATCTGCATGAGGGACTTGAGCCAAAGGTGGTTCATCGTGATGTCAAGTCGAGCAACATCCTCCTTGACAAGACCTGGAATGCTAAGCTTTCTGATTTTGGGCTAGCAAAGCTTTTGGGCTCAGAGAGGAGTTATGTAACAACCAGAGTTATGGGGACATTTGGGTACGTAGCTCCAGAGTATGCTGGTACTGGCATGTTAAATGAAACTAGTGATGTCTATAGTTTTGGAATTCTTATCATGGAAATAATATCTGGTCGGGTACCAGTGGATTACAACAGACCACCAGGGGAGGTTAATCTTGTTGAATGGCTGAAGACAATGGTGAGCAACCGAAACTCTGAAGGGGTTTTGGATCCAAAGATGACTGAGAAGCCTACTTCTAGGGCACTGAAGAAGGCTTTGTTAGTAGCTCTGCGATGTGTAGACCCAGAAGCCCGTAAGAGGCCAAAGATTGGGCATGTCATTCACATGCTTGAAGTTGATGATTTTCCCTACAGAGATGAACGTCGCGGTGGCAAAGCTCCAGGTCAAGTGAAATCGGGAGAAATACCGCCAGTTGAAGCTGGTGATAGCAGCGGGAACAATACGCCAAAAGAAACACCAAAAGGTCAACCGAAAGATGAACCTTTCAAGTGGAGAAATCAAGCGGCGGCCTAG
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| Protein seq | MSDSELSQSTVVFGLHLWELVGIGVGAAFVLLLVLLSLLCLVASRRRRRRRGVAVATPVLHLATAVAPPKHPGKPPKDIQEVPSRAAAAAAAPKAQPAQVIQAPPPQPPPSESIQIETGKEHRITFREQQHQPPQPPPYHQRSGGPSSRGGSGESRGGGGGGGGGGAEPGVPEVSHLGWGHWYTLKELEDATAMFADEKVIGEGGYGIVYHGVLEDGTQVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGNQRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDMRMKIILGTAKGLMYLHEGLEPKVVHRDVKSSNILLDKTWNAKLSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYAGTGMLNETSDVYSFGILIMEIISGRVPVDYNRPPGEVNLVEWLKTMVSNRNSEGVLDPKMTEKPTSRALKKALLVALRCVDPEARKRPKIGHVIHMLEVDDFPYRDERRGGKAPGQVKSGEIPPVEAGDSSGNNTPKETPKGQPKDEPFKWRNQAAA |
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| Function | Probable serine/threonine-protein kinase At1g01540 [UniProtKB/Swiss-Prot:Q3EDL4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0013560 | OsAzu_04g0013560.01 | Chr04 | 19819576 | 19823511 | + | NAM | ||
| CDS seq | ATGTCGGACTCGGAGCTGTCGCAGAGCACGGTGGTGTTCGGGCTCCACCTGTGGGAGCTCGTCGGCATCGGCGTCGGCGCGGCGTTCGTGCTCCTCCTCGTCCTCCTCTCGCTGCTCTGCCTCGTCGCCTCACGCCGCCGCCGCCGGCGGCGAGGGGTCGCCGTGGCGACCCCCGTGCTCCACCTCGCCACCGCCGTCGCGCCGCCCAAGCACCCCGGCAAGCCGCCCAAGGACATCCAGGAGGTGCCCTCCCGCGCCGCCGCCGCCGCCGCGGCGCCCAAGGCGCAGCCGGCGCAGGTAATCCAGGCGCCGCCGCCGCAGCCGCCGCCGTCGGAATCCATCCAGATCGAGACGGGCAAGGAGCACCGCATCACGTTCCGGGAGCAGCAGCATCAGCCGCCGCAGCCGCCGCCCTACCACCAGCGGAGCGGGGGCCCCTCGTCGCGCGGCGGCAGCGGGGAGAGCCGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGCGGAGCCCGGCGTGCCCGAGGTGTCCCACCTCGGGTGGGGCCACTGGTACACGCTCAAGGAGCTGGAGGACGCGACGGCCATGTTCGCCGACGAGAAGGTGATCGGCGAGGGCGGCTACGGCATCGTGTACCACGGCGTGCTCGAGGACGGCACGCAGGTCGCCGTCAAGAACCTGCTCAACAACAGGGGGCAGGCAGAGAGGGAGTTCAAGGTTGAGGTGGAAGCGATTGGGCGGGTGCGGCACAAGAACCTGGTTCGGCTGCTGGGATACTGCGCCGAGGGTAACCAAAGGATGCTTGTGTACGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTCCATGGTGATGTTGGTCCCGTAAGCCCTCTCACATGGGATATGAGAATGAAGATTATACTAGGAACAGCAAAAGGCTTAATGTATCTGCATGAGGGACTTGAGCCAAAGGTGGTTCATCGTGATGTCAAGTCGAGCAACATCCTCCTTGACAAGACCTGGAATGCTAAGCTTTCTGATTTTGGGCTAGCAAAGCTTTTGGGCTCAGAGAGGAGTTATGTAACAACCAGAGTTATGGGGACATTTGGGTACGTAGCTCCAGAGTATGCTGGTACTGGCATGTTAAATGAAACTAGTGATGTCTATAGTTTTGGAATTCTTATCATGGAAATAATATCTGGTCGGGTACCAGTGGATTACAACAGACCACCAGGGGAGGTTAATCTTGTTGAATGGCTGAAGACAATGGTGAGCAACCGAAACTCTGAAGGGGTTTTGGATCCAAAGATGACTGAGAAGCCTACTTCTAGGGCACTGAAGAAGGCTTTGTTAGTAGCTCTGCGATGTGTAGACCCAGAAGCCCGTAAGAGGCCAAAGATTGGGCATGTCATTCACATGCTTGAAGTTGATGATTTTCCCTACAGAGATGAACGTCGCGGTGGCAAAGCTCCAGGTCAAGTGAAATCGGGAGAAATACCGCCAGTTGAAGCTGGTGATAGCAGCGGGAACAATACGCCAAAAGAAACACCAAAAGGTCAACCGAAAGATGAACCTTTCAAGTGGAGAAATCAAGCGGCGGCCTAG
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| Protein seq | MSDSELSQSTVVFGLHLWELVGIGVGAAFVLLLVLLSLLCLVASRRRRRRRGVAVATPVLHLATAVAPPKHPGKPPKDIQEVPSRAAAAAAAPKAQPAQVIQAPPPQPPPSESIQIETGKEHRITFREQQHQPPQPPPYHQRSGGPSSRGGSGESRGGGGGGGGGGAEPGVPEVSHLGWGHWYTLKELEDATAMFADEKVIGEGGYGIVYHGVLEDGTQVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGNQRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDMRMKIILGTAKGLMYLHEGLEPKVVHRDVKSSNILLDKTWNAKLSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYAGTGMLNETSDVYSFGILIMEIISGRVPVDYNRPPGEVNLVEWLKTMVSNRNSEGVLDPKMTEKPTSRALKKALLVALRCVDPEARKRPKIGHVIHMLEVDDFPYRDERRGGKAPGQVKSGEIPPVEAGDSSGNNTPKETPKGQPKDEPFKWRNQAAA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.071689 | 9.895835 | 7.583899 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0430000 | RBH | 0.175264 | 0.718953 | 3.771973 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g35080 | RBH | 0.125584 | 0.256607 | 0.728069 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0430000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0020690 | RBH | 0.000000 | 23.696850 | 5.517277 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0014410 | RBH | 0.248883 | 4.146139 | 1.912463 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014150 | RBH | 0.652666 | 23.751076 | 8.403256 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0013740 | RBH | 0.000000 | 0.696557 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014070 | RBH | 0.761982 | 12.876013 | 19.546053 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0334100 | RBH | 7.9915995 | 10.3876945 | 10.419488 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0012980 | RBH | 0.041475 | 0.997256 | 1.472669 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0331200 | RBH | 8.638163 | 4.008613 | 20.9100685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0013530 | RBH | 0.032223 | 0.328795 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0013210 | RBH | 0.160158 | 5.213892 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013230 | RBH | 2.756595 | 13.921953 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0013850 | RBH | 0.000000 | 1.326560 | 1.329997 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014030 | RBH | 0.0 | 9.482938 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013120 | RBH | 0.129889 | 2.537696 | 6.976368 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0013020 | RBH | 0.357759 | 5.175526 | 7.287759 |
