Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0011160 | OGI:04060740 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:17441204-17441416 | ||||||||
| Gene Symbol | MADS64, OsMADS64, DLN110, OsDLN110 | ||||||||||
| DNA seq | ATGGGGAGGCGGGGGCGGGTGGTGCTGCGGCGGATCGAGGACCGGGTGCGGCGCGGGATCTGCTTCCGGAAGAGGCTCGCCGGGCTGGAGAAGAAGGCGGAGGAGCTCGCCGTGCTCTGCGACGCCCACGTCGGCTTCGTCGTCCTCTCCTGCTCCGACGACGACCGCCTCCACCATTTCGCCGCGCCCGCCACGTACGCTCTTTCCCCTTGA |
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| CDS seq | ATGGGGAGGCGGGGGCGGGTGGTGCTGCGGCGGATCGAGGACCGGGTGCGGCGCGGGATCTGCTTCCGGAAGAGGCTCGCCGGGCTGGAGAAGAAGGCGGAGGAGCTCGCCGTGCTCTGCGACGCCCACGTCGGCTTCGTCGTCCTCTCCTGCTCCGACGACGACCGCCTCCACCATTTCGCCGCGCCCGCCACGTACGCTCTTTCCCCTTGA |
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| Protein seq | MGRRGRVVLRRIEDRVRRGICFRKRLAGLEKKAEELAVLCDAHVGFVVLSCSDDDRLHHFAAPATYALSP |
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| Function | MADS-box transcription factor 30 [UniProtKB/Swiss-Prot:Q655V4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0011160 | OsAzu_04g0011160.01 | Chr04 | 17441204 | 17441416 | + | NAM | ||
| CDS seq | ATGGGGAGGCGGGGGCGGGTGGTGCTGCGGCGGATCGAGGACCGGGTGCGGCGCGGGATCTGCTTCCGGAAGAGGCTCGCCGGGCTGGAGAAGAAGGCGGAGGAGCTCGCCGTGCTCTGCGACGCCCACGTCGGCTTCGTCGTCCTCTCCTGCTCCGACGACGACCGCCTCCACCATTTCGCCGCGCCCGCCACGTACGCTCTTTCCCCTTGA
More
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| Protein seq | MGRRGRVVLRRIEDRVRRGICFRKRLAGLEKKAEELAVLCDAHVGFVVLSCSDDDRLHHFAAPATYALSP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.488750 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0387300 | RBH | 0.681965 | 0.698601 | 2.222408 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g31804 | SBH | 1.318544 | 1.730963 | 1.501827 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0387300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0045290 | SBH | 0.310900 | 7.583321 | 1.172813 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0011940 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0011640 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0011310 | RBH | 0.0 | 0.043099 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0011550 | RBH | 0.227836 | 11.326727 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0303300 | SBH | 0.877809 | 8.5304045 | 20.161587 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010500 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0221700 | SBH | 0.0715225 | 0.251807 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0011150 | RBH | 0.0 | 0.540509 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010740 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010780 | RBH | 0.0 | 10.061419 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0011270 | RBH | 0.0 | 0.276946 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0011480 | RBH | 0.420315 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G010640 | RBH | 0.0 | 0.0 | 0.832965 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0010710 | RBH | 0.0 | 0.0 | 0.0 |
