Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0000200 | OGI:04000760 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:351985-359966 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTTTTGCTCCGCTGAAAGCCCTGAAACCACACGAACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGCAAGAACTAACTACTCCTCCATTCTTCCTCCTGCTCTACTACTAGTTTTTTCATCGTTCTTTCTTGTTTTACCACTGTCTACTCCAACTAGTACAAAATTCTCACACTCTTTCGATTATATCTTCCTGTTTTGCACCAACAGATATTGGTTCAGAATGAGTTTAGTTGATAAGCTCTAGAATCGAAACTATTGATCAACACATGATTCAAGTCCTTACAGCTGATATCACTTGAGTTAGCTTGGTCCAAAAGTCCTTTGACAAGCAAGAAAGTAACTTTTCATCACCTTAGCTTAGTCTGGTATTTTTGTATAGGTTGAAATAGATTACTATACGTCGCACCATTATATTATTTTAAGATAAGAGCATCTCAAATACATTGAACAAGTAACTTTTCAAATTGGTGAGATTATAATAAGTTTATCTGTTTTGCAACATGTGGATGTGGCTATGATGACATTAAAATGAAGGTATGCCATGGTATATTGGTCATCTCGTAATGTTGTGTCATTTTGATTCATAGAAACTTGAATGGATGAATTGCATTTTTTAAAAAAAAAGTCAAACCTTGATGTTTGTTAATAGATTATGACATGAACACATGACACATGGAAGTACACTGTTTGAGATTTTGAGTAATACTGGAATCATTGATCCAGTCATAAATACCTTAATACAAGTCATCCCAATAATTCCTGTATACCAGTGATTCTACCTAAAATTCGAATCCGAGTAGCTGGTTAGATGATAGCATGAACCAAATTATTCCATTCAGCATACTCCAATTAATGCATGCTTGTACTTGTAGTAAGTATACATGAACGATGGAATTCTTTTGCATTACGTCCCTCAACTCTTGTTGATATTGTGGACAAATAGAAGCATGGTCAAATATTGGAAGCTTGTCTCAAAGCTTCATCTTGCTCTCCCAGATATAAATTCAACTTTTCTTGCACTAATGCTGAAATACTACTGCTTGGTTCAACCTTGAGTTATTGAAAAATGTGCGATGTTCGAAAATAATTCAGAAACTAGGACTATAATTTTTAGGGTTATGATAATTAATTTTGAGAAATCTTTATCAAGGTCTGACATGGTCAATACTAAAAGAGAATCGGTTTAGTTTACAGATATTTCACAATGGAAAGGAGTTTTTTTCGTAATTTTAAGTTGTGTGGTATGCATATTTATTTAGAGGCTTCTGAAATCTGTACTTGTTTCATTTCTTTTGTACAAATACACTTGATTAGTTTGGCTAGTCTTTTATAAATATATAACAGTACTTACAGTATCCCTAGTGCTAGGAAAGAAATCATCTTCAGTACCTTTATGAAGCACATTTAGAAGTAATGGATTAAGGGACAAAGAGGTGATGATAATAACCATGCAGATATCATGTTTATCTGGTTTGTAAAAATATTGAAAAAGTAAACTCCCAATTTTGGCTTTTTAAAAAAACTTAGAATTGCATGCTTATCTTGTGTAATACTCCTTCCATTTTACTATTTTTTGTCCAAGGCTTTCATGCCCATTATGCACATAGACCAAGCAGTGGTAGTCTACTAGATTTAAAATAAAGTGGGATTGTATAAACCAATCAAATGACATATGGAATCTGCTCAATCGTTTGGCTCTTTTTCAGCACTAAAGTAGTAGAGAGTGCAAAAACTATAAATATTTGGATAGCTTCATTTTTTATTTTCTCAGTAGACGAATGTGAAATGACACTTTCCAAGGAAATAGTCACTTGCAAGACAGAGGGAACATATTTTCATTCCTAGAAAGAAGCATGCAGTTTGCAGCTTTAAATCATGTTAGATTATGCCAACCTAAATGCTGTAACTTCATTGATGGTGATGCAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCTGAAGAATGCTATCGAGGTAATTATTGGTATGTTCATATTGGAACGTGTTTGAGCAACTGGGAAGTGACAATGACTCTTGCATATTAACTTGAGTAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTGTAAGATCAAAACCATAATCTTCTTCTACCTTTTTGTTTGCTTGAATCATTAGTAACTTTTCTTGTTATCTACTTCCGCAGACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTAGCCTCCTACTCTCATTATGTTGTGTTTGATATAACTAAGATATGCTTAGTAATTGTGGCTCTAAACACATGTTCTGTGATAAGATTGTTTGGGTAGAACACGATAATTTTATGTACTATTTATTCTTCTGGTGGCTAATAGGAAAAGTGCCAAAATTGTAGTGGGGATTTGGATGATCCAAATGCATAAATTTTCTTATAATTTCCAACCTAATAACAGTTAAAACTAGTATTATATATGGCAGGTTTTTAGTTAAAGACTTAAAGTTAGTAAAATTTCATAATGCAAGTTCTAGTTAAATGAAAGTGCTATGCTCCTCACTTATAGGGGAATGAGTATATGTATTTGATTAGGAGTTTAATACCTTCTGTCCAAGCATTTGTACATTTCATTTATTCCATTTTTCCTCTTTAGTTTGTCATGATTATATTTTAAATCATGCAGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGTTGGTTTCCCTATTTGTTTTCTGTTTGTTGTTCGTGCTCAGCACTAATGATTGACAAAACAAAATCCAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTTGATAATTGTGGATTTTGGCGTCAATTCACAGTATGATCTCTCAAAGCTTTTCAACTCTTTCAGTGGGTGCTTATATGTTCATTTCCTGTTGGTATATTATACACTTTATTTGAACTATTTTAGTTCTGGGATAATAATTTCTCAGACTATGGCTGCTGTATAGGTTCGGGAGGGAAGATGTCGAGCTCAAGCTGTTGCACAGAATGCAGAAACCCAAATATCAGAAGTCATGCTTATTGTTCAGGTAGTACCTCATTCTCAAATAGATGGTGCTTTAGAATGTGCTCTATCAAACCTCATAAACTTTTGGTGGAGAATATAAAAAATTAATACATTAAGACTTCTCATGTCAAAATGACATTAGTAGATCTGTGACATCTGTCATGAAAAATATATTTTTAGTAGTTTTGAAAAACATAATACTATAATAAGTACTGGTTCAAAGGTGCGTGACAAGGGAACAGAAGGATTATAACATCAAGAATCAAAATGCATTGTATACTACGAGTCCTGTAGATCACATCAGTGCAATACATGTTCCTACTGGCAGTATTGTCTGACTTCCTATGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGTAAGTTTGAGTTCTTTGTCTGGAAGTAAGACTTCTATTTATAGTTTCCTCCATTGCCTCAACATTTCAGCTTGTCTAAACTGACCACTCTTATAAGTTTTATTACTTTATACTGTAGATGTCTTGCTGTCCTGTAACTCAATATGCTACCCACTAATATCTAGGAGTTACCATTGTACTAAAAATGTATAAAACATGGTTGATAGGAGTTCAGAAAGTGCATTTATCTGGGTACATCCGATCACTGGTAGAATATGTTACCACTTGAACCAAACTTTATGTAATTTATAATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTTAGCTAAAACTGCAGACAGCTTTGTCCATTGGCTATCACGGTTCAATTTGGTAATGACTCACTATTACACAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTGATTTCCTCCATTCATTTCATGTGATTGTGCATGATACTTCTTATTACCCGTATAATGCTCAGCCACAGCTGGGCTCTTTATTAACTTATGTAGAATTTTGGAAATGTCATGGTAGAGAAGTCAATGAATGATTTAGCGAATTCCTTGTCAAATGTGCAGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGTGAGGCTTATGCCCTTGTATTCCTAGAAGTTTCTATCATTCTATTGTCACTGACTCACTGTAGCCACCATGGTGTCAATCCTATTCAGTTTTTCTTATGTCCTACTTTATATACTCACCACATCAGGCTCATCTGAATTTTACATCTTGGGATTAAACAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAAGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCAAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGAGTAAATTTCAATATCTTAGTCCATTCTTGTTACAATTGTTTGCCCCTTTATATTCCAAATGCTTCCATGCAAACTTCAAAACATGCCCACAAAATTGATATCCTTTATTTTTATTGTCCATTATTCTAATCTACATATCCTAATAAATTTAACCAAAACTATGGATTTTATGTGTATGTTCTTTAATTATGCAATAAAATTAGTGGTTTTGTGTTTTTTGTGTGAGATTTATACCTAACTTTTACTGATTCCTACTGGTTAAAGTTGAGCATATATGCCTGAGTAGGTATAACATGGTTCAAAGCAGGCAATGGAAGAACCATGACCTAAACTGGCCTAGATCCTTTTCTGGTCCATTTTTTTACTAGTTAAACAGCCAATCCATTCCCACTTCGCATGATTTTGATCTTCAATAGAGATATCACTAAAGTGAAGAAATGAAGAATCTAGAGAAAATCAAGACAACATGCAACTAACAGATAATGTAAATATAATGAGCTTCCTGTGACTTTTCACTGTCTGCATACTGTGAAGCATTAAACCACATTTTTTGTCACTTACAATGAAACTAGATTTGTATCCCATATGCATATGAACCTATCCATACACATACATGTGCTGCCAATAAATGCATTTCTGGTCAATTCCAAATATATTGATTCATTGTATGTGTCCTATACCTTTCTTTCTTATGTATGGTGTTGAGTATTTTAATTGAACTATCGACTCCCATGGAGGATCAAGCTTACACACTGAATTTGATAGGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTAAGTATCTTGTGTACCTGATTTCTGCTACACTGGTCTATTATACAAAATGAAATCTTAGTGATGGTCGAAATTGTAAGAAACACCGTTTGTTCTCTTGAAGCTAGTAGAGAAAGTTAGACATCTTTTGCATCAATGCTGGCCAGTTGCAATTTAATTTACAGTACTGGCAATAAGTGGTCCTGTTCCTGAAAGATGAGGGCAGCATTCTCTCAAGAGTATTGGCAAATAAAAACAGCATGTCTTGCTGTGTTACTGCTCTGAAACTGATTTTCCTCTTATTTGTTTTTACCAGGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTAGAACATCAATTTTTCATGTTAAATGAATTGCACTCAAAAAGGACCACAACCACAAAGTAGGCACACTGGAAGCTGAAACTTAACATGTGACATGCATCTGTCTTATTTTTAGGTAAACCCCAAAAGAGGACAGGGAGTTCCTGTTTTCATTTAAGAAGAAGAGAGTGACCCGCATCTGTCATAACTAGAGCTTTGATGTATTGGCAATCTTGTCAGGGAAAAACCGTACTTTGGTACAGGATCCAGTGTTTGCCCCATCCATGGCAAACAACAGTGCTGGTAGTACTAATATTTGTGCTCAGATTGTAATATTGTCAATAGGGTGATAAAAAAGAGGTTCAGTTCCTTGCTACTCATTGGCTGCATCTGGTAAAGGATGGCCTAACATAGACTAATAAATATCTAAATGCATGGAGATGGAGTC
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| CDS seq | ATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGCAAGAACTAACTACTCCTCCATTCTTCCTCCTGCTCTACTACTAGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCTGAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTTGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCGAGCTCAAGCTGTTGCACAGAATGCAGAAACCCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAAGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCAAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGA
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| Protein seq | MEMEMEDNKAPSPPSPMESDVAGEKRKREDDASSSAVLAAANNTGGAQHPMWKTSLCSFFRRRAASSADGCSHGDSCRYAHSEEELRPRPDGTWDPTSDRAKKLRKVAADEVEEEVVTIDDKALDKCLVGLPRGWANDRLKTFLQDKARTNYSSILPPALLLGISYATAKKKKGMTVGFVTFENIEQLKNAIEVLTENQSGGKEIKIADANRRSHQKLHTEKPVSDNGVTTENGTSVDVPPGETSAPEAAISNKKSVRDAVTPLAHMSYNDQLEHKKNSVAQILKRLTRNARKACPTGIPLPDWVFKSKEIGGLPCKLEGILESPVINGYRNKCEFSVGFSLEGKKTVGFMLGNFREGVTAVEEPVDCPNVSEISCKYALMFQDFLQSSSLPVWNRVDNCGFWRQFTVREGRCRAQAVAQNAETQISEVMLIVQVCSTGVDDAVMKDEFDKLTVALQQGAATCSPPLPLTTIVVQDHKGISNAAPADCPLIPLLVPKVDQSEGTVDKTRIHDHIGNLWFSISPTAFFQVNTLAAERLYTLAGDWANLNSGTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNESAVSDAERNALINGVSNCRFVCGKAEDVMGSLLTEYLGSPQQDIPVSEGAVSGTVKDEEVIDSSKNSGENLDSSMQKNDNGKSQQLGDAPADSSSSAIDEIKGNSNDRVGNGLEGSHDEYNEVAGEDIHGEASLINESVDLKVSDCLEDRKTSDDGSSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKALRTHPRIRRLVYISCNPDSLVANAIELCTPSSEKQEKNKGNRGWRTMSSAGLARQRTKSMPNSEPFVPKRAMAVDLFPHTSHCEMVMLFER |
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| Function | Zinc finger CCCH domain-containing protein 24 [UniProtKB/Swiss-Prot:Q8L7S3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0000200 | OsAzu_04g0000200.03 | Chr04 | 352072 | 359703 | + | NAM | ||
| CDS seq | ATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGCAAGAACTAACTACTCCTCCATTCTTCCTCCTGCTCTACTACTAGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCTGAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTTGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCGAGCTCAAGCTGTTGCACAGAATGCAGAAACCCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAAGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCAAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGA
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| Protein seq | MEMEMEDNKAPSPPSPMESDVAGEKRKREDDASSSAVLAAANNTGGAQHPMWKTSLCSFFRRRAASSADGCSHGDSCRYAHSEEELRPRPDGTWDPTSDRAKKLRKVAADEVEEEVVTIDDKALDKCLVGLPRGWANDRLKTFLQDKARTNYSSILPPALLLGISYATAKKKKGMTVGFVTFENIEQLKNAIEVLTENQSGGKEIKIADANRRSHQKLHTEKPVSDNGVTTENGTSVDVPPGETSAPEAAISNKKSVRDAVTPLAHMSYNDQLEHKKNSVAQILKRLTRNARKACPTGIPLPDWVFKSKEIGGLPCKLEGILESPVINGYRNKCEFSVGFSLEGKKTVGFMLGNFREGVTAVEEPVDCPNVSEISCKYALMFQDFLQSSSLPVWNRVDNCGFWRQFTVREGRCRAQAVAQNAETQISEVMLIVQVCSTGVDDAVMKDEFDKLTVALQQGAATCSPPLPLTTIVVQDHKGISNAAPADCPLIPLLVPKVDQSEGTVDKTRIHDHIGNLWFSISPTAFFQVNTLAAERLYTLAGDWANLNSGTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNESAVSDAERNALINGVSNCRFVCGKAEDVMGSLLTEYLGSPQQDIPVSEGAVSGTVKDEEVIDSSKNSGENLDSSMQKNDNGKSQQLGDAPADSSSSAIDEIKGNSNDRVGNGLEGSHDEYNEVAGEDIHGEASLINESVDLKVSDCLEDRKTSDDGSSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKALRTHPRIRRLVYISCNPDSLVANAIELCTPSSEKQEKNKGNRGWRTMSSAGLARQRTKSMPNSEPFVPKRAMAVDLFPHTSHCEMVMLFER
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0000200 | OsAzu_04g0000200.01 | Chr04 | 351985 | 359966 | + | NAM | ||
| CDS seq | ATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCTGAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTTGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCGAGCTCAAGCTGTTGCACAGAATGCAGAAACCCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAAGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCAAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGA
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| Protein seq | MEMEMEDNKAPSPPSPMESDVAGEKRKREDDASSSAVLAAANNTGGAQHPMWKTSLCSFFRRRAASSADGCSHGDSCRYAHSEEELRPRPDGTWDPTSDRAKKLRKVAADEVEEEVVTIDDKALDKCLVGLPRGWANDRLKTFLQDKGISYATAKKKKGMTVGFVTFENIEQLKNAIEVLTENQSGGKEIKIADANRRSHQKLHTEKPVSDNGVTTENGTSVDVPPGETSAPEAAISNKKSVRDAVTPLAHMSYNDQLEHKKNSVAQILKRLTRNARKACPTGIPLPDWVFKSKEIGGLPCKLEGILESPVINGYRNKCEFSVGFSLEGKKTVGFMLGNFREGVTAVEEPVDCPNVSEISCKYALMFQDFLQSSSLPVWNRVDNCGFWRQFTVREGRCRAQAVAQNAETQISEVMLIVQVCSTGVDDAVMKDEFDKLTVALQQGAATCSPPLPLTTIVVQDHKGISNAAPADCPLIPLLVPKVDQSEGTVDKTRIHDHIGNLWFSISPTAFFQVNTLAAERLYTLAGDWANLNSGTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNESAVSDAERNALINGVSNCRFVCGKAEDVMGSLLTEYLGSPQQDIPVSEGAVSGTVKDEEVIDSSKNSGENLDSSMQKNDNGKSQQLGDAPADSSSSAIDEIKGNSNDRVGNGLEGSHDEYNEVAGEDIHGEASLINESVDLKVSDCLEDRKTSDDGSSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKALRTHPRIRRLVYISCNPDSLVANAIELCTPSSEKQEKNKGNRGWRTMSSAGLARQRTKSMPNSEPFVPKRAMAVDLFPHTSHCEMVMLFER
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0000200 | OsAzu_04g0000200.02 | Chr04 | 351985 | 359703 | + | NAM | ||
| CDS seq | ATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAAGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCAAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGA
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| Protein seq | MVYLQLRNLLLLMQDHKGISNAAPADCPLIPLLVPKVDQSEGTVDKTRIHDHIGNLWFSISPTAFFQVNTLAAERLYTLAGDWANLNSGTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNESAVSDAERNALINGVSNCRFVCGKAEDVMGSLLTEYLGSPQQDIPVSEGAVSGTVKDEEVIDSSKNSGENLDSSMQKNDNGKSQQLGDAPADSSSSAIDEIKGNSNDRVGNGLEGSHDEYNEVAGEDIHGEASLINESVDLKVSDCLEDRKTSDDGSSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKALRTHPRIRRLVYISCNPDSLVANAIELCTPSSEKQEKNKGNRGWRTMSSAGLARQRTKSMPNSEPFVPKRAMAVDLFPHTSHCEMVMLFER
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0000200 | OsAzu_04g0000200.04 | Chr04 | 352017 | 359593 | + | IsoSeq | ||
| CDS seq | ACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGG
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| Protein seq | TRGFASVSLPLRRRRRHPWRWRWRTTRRPRRHHLWSPTSLGRSARGRTMHPPPLYLPPPTTPAVPSTPCGRPASAPSSAAAPPPPPTAAATATPAATRTPRRSSARAPTAPGTPPPTAPRSSARSPPTRWRKRWSPLTTRPWTSASSASRGDGPTTGSRLSSKTRESRMQQRRRRR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr04 | 356332 | 356945 | + | OsAzu_04g0000200.02 | OsAzu_04g0000200.01,OsAzu_04g0000200.02,OsAzu_04g0000200.03 | All |
| A5 | Chr04 | 352512 | 354375 | + | OsAzu_04g0000200.03 | OsAzu_04g0000200.04,OsAzu_04g0000200.01,OsAzu_04g0000200.02,OsAzu_04g0000200.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.360906 | 2.821648 | 2.555140 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0105000 | RBH | 1.546259 | 2.448919 | 1.968701 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g01480 | RBH | 0.931667 | 1.590003 | 0.501085 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0105000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0000210 | RBH | 0.080072 | 1.705569 | 0.558111 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0000180 | RBH | 0.898577 | 7.466829 | 4.832755 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0000210 | RBH | 0.089731 | 0.298070 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0000170 | RBH | 2.608715 | 6.698309 | 9.828269 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0004300 | RBH | 4.7504805 | 10.2965825 | 3.8290275 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0000200 | RBH | 0.360740 | 0.542245 | 1.066669 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0005300 | RBH | 5.701549 | 8.86459 | 14.6891135 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0000190 | RBH | 0.146022 | 0.076648 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0000200 | RBH | 0.684037 | 19.182091 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0000200 | RBH | 0.395388 | 7.809825 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0000180 | RBH | 0.435792 | 0.686108 | 0.448155 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0000180 | RBH | 0.041268 | 10.021112 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G000220 | RBH | 0.365213 | 3.265890 | 1.733331 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0000150 | RBH | 0.437533 | 12.445749 | 2.984651 |
