Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_03g0043000 | OGI:03101320 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr03:38351017-38357867 | ||||||||
| Gene Symbol | THI30, OsTHI30, OsTHION30, THION30 | ||||||||||
| DNA seq | AAGGCAGGAAGGCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTCCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGCGATTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTCGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGTGCGTGTTTTGTGAATTTCTTCTTCTTCTTCTTCTTCCTCCTTTCGGATGCGGAATTGATTAGATTCATCGATCGATTTGGGGGTGTGGATGAACTGAACTGATCTGATGGATGCGTGCGATTCCAGGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGGTACGCACGCATCCTATACTTCTTCTTCTTCTTCTTCTCTTGATTGATAGATTGATTGATTGATGCTGAGCCAACGGAACGCAGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACGTATTCTCGCACTACTCGTAACAGAAAATCATCATCACAATCATGCCGGGTCCCAAAATCTCTAATGCTCTTGCCTCTGTTTTAGATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGGTAACTTTATTTTCTTCTTCCCCCCAGCAACCATCTCAAAGATTACCGTTCCTCATGAAAACTCTCGCCATTCAGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGTAATACCCTTCCATCTTCTCAAACTCCATTGGTTTATGTACCGCCTCTCACTTCTTACTCTCTGTCCAACCATTTTCAAGGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGTGAGTTAATTGCAATCACACAACTATTCTCTCTGTTTCTCTATGAGGAAAACAGATGGTAACCTTGGACTTTATGGAATAGGTGCATGACATTCCCATAAAAATCTGTTTTGTGTACAAGCGCTTTTTTTTTATGCCTAGTATTCTCAGATGGAAGATAAGCTTTAGCCCCAAAGTTCACACTTGGGGATTTCTTGATTTATTTGTAGCTAGTTAGCATGTGGCCATCAGCGTTTGATTAGCAATTCCAGTAAATGATGGAAGGCACATTTTTCCTTATAATTCTTTTGCTTCTACTTAGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTGAGTTTGCTGATATCCCTTTCCATATGCTTGCATACTTCTCTGGTTTCCTTGAAGAAAAGCTTACCTACTAGTTGCCTGCTGAAGGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGGTCAGTATGCAATCGGTCTGAGAAACTTTATTTAAGAGTTAATGACATGTCCAAACATAAGTTTGCATATCCATAATGACCTATGTTTTGCTTTCATATTATTCTACGGTTCTATCAATACATTCACCTGTTTCAATTAAGAACACTACGTTAGTGGTTCACTTTCTGTTCCTTGTTCTGTGTTATAATTACTCAGGATATTTTCTTTGATATTTGAATGGAAATTAAACTGGCCATTTTGTTTTATTTTGTAATAATATTACAGTTTTCCCTGCTTTGTATTTGACATTAGCTCTTTATCTTGTATTTTAAAAAAAAAATCTAAATCCGAATTTCAGTATTTTTTTTTGTTTTAACTTATGGACCCACCTCAAAATCAATGGCTTAGATATTCGCTTTCTCTGATAATGTGATAATTTCTAATTGAGAACAATTCTGGAGGTTCATTTTCACCTTGTTCTAGCAACACAATATATTCTATGGGTAATTATACTATTTTTGTCGTTTTTTAGTACTGTATGCATGTATTCATTAACTGCACACACTATTTTGCAATCCTATTAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGGTTGAATGAACTAATTAGCTTGTTACAAATAATATCAACTTTCCCTAACTCTATATGGGCGATACCTGAATGTTCCAATTATTCTTGATATCCAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGTGGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGTATGTGCTGTGCTCTTCCATCAACGTTATCAGTTTTTGGCAATCAGTTGGCTGTGCTTGAGTAACTTCTGTTATTGACAGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTAAATATTTCAAGTTCTTGATTTGTGTCATACATCTGTGAACAGAGAAAAATTTAGAATAAGTTCATTTTTGTGTAGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTTGCTTTGTTAAACTCTATTATATATTTTGAGGGGGTTTAATAATTTCTCTCGCAAGAAGTTGCTCTGTTGTGCCAGATCGTAAGAATATATATTCCTTGAAGATCATTGCTATTTCTTCTATAACTGCAATTCAACTAATAAAAGTAATTTTGATGTTTTCACACAGTTATAACTGGCAAAATCAAATTTGTGTTTCCAGTAATGACATTTCATCATTGTCTTCTCCGTACATCCTTTGCCCCACTTTTACATGCAGAATGATGTTATAATTTTCTTAGTGCCTTTTTCTTCTATTTGACTTGGGAAGAGAAGTAAAGATGTTTGTATATCTGGGGCATATTTGGTTCTAAAGAATTCTACAATGTTGCAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAAGTAATTTCTTTTTAGTCTTTTATCTATCTATTTTTCTCCTCTATAGTAATTTTCTTACTTAGGTAAGTTATACTTTCCTTTTTGGTTCATTTCAGAGCTGACTATTGACATTGCATCGTAAACTTTTATTTTCTGGCTGTGGCAAGAGAGCACCGCAAACCTATATCACCTACTATGTATATTACTGTTTTTAAGCTCGCTCTTGCAAACAAGGAATTTTTTGGGGAATTTTCTATCACAAACCTTTCTATGGGTGCTATTGTGGCACTCATCGCATAAGCTGCCAAATCAGATTTTTAAAAAAGAACAGGCTCTTTTAGTTACTGCCACATCTCTCTATATTGATCTATCTGAATCTTAACCGATGGCCCACATGGGAGTTACGTAGTAGTTGTTATGACCCAAGATTTGCTGTAGGTGATTTTATCTAGATATTTATACAACATTGTGAAGCACTTGAGGTCTGTCAGAGTACTATCGTATCTTTCATGCTGCACATGAACACCTTCTCTTGTGCATAACCCAACTTGATGATGTAAATCGTGCCTCATTTGTTACAGGGATACTGTTAGTTTTGAAAGTTGATATTGAAGCAGAAATCTCTAGTTGCTAAATGCAAAACTATATGCAAGAATCTGAAACAGTACTGCTGTAAGCTGTCATTTGATACTTCCCGTGGAATTTCTTATCATGTCATGGATTCCATAAGCTATCGCTCACGCATAGTAAATGCGCATGTGACGTCACTGTAGTTCTGTGCCAATCCATGTACTGTGAACAAATGCCTTGATTTTAATTTGTTTCATTTCATGATGCTAGTGGTTGACTATGAGGCAGTCAAATCACACTTTACTGTTTTGCTGGTAACCTAAGTCAAACATGTTCTCGATTTTTCCAGCGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGGTTGGTCCTTGGTTCCTTATCCTTTGAAATTTGTAAACCGTTCACACTTGGGCCAATTCAATGATATTTACTTGATGTCATTACAGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTAATACATATGGGATGCTTGATCTTATGCAGCTTTTGCAACGCAAGGTAATCAATCATTGTTTTGTTTGCTTGAGTTAGGTTCATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTACCAGGTAAATCCTTTACACATATAACTGCCTTTTGACATTCTGCGATTGCCAACATGCTAGATAGGAACACCTTTTGCCATGGTCATAAGAGCCTAGAGACTTGTTTATTTTCTCACATTCTTTTCTCTCCTATCATAACATGGAGGGGGGGGGGGAGGAGGCTGTGTGTTGGAGCGAGAGTGGGGGTATTAAGGGGAAGGGTGAGTGAGAGAGAGAGAGAGAGAGAACGTGATATTCTAGTACACTGACGAGTATTATATGGCTTCACTTATCCTAAAGACAAGTACACTATTTTCCTCTTGCTATTAAGTCACAAAGCATTGACCGCCCTGGTGGTATCAATGTAAATAGCCGAGCACATATTACATGTCTTAAGAAAGTGCTACCTATATTAATTTCTTAGACAAATTGCTCCTCCTCGATAATATGTCTTGTGTGTCCAAAAGACTTTTAACCGTCGGAATGGCAACTGATTGATGGTCTTTGGTGTCATTTGTGCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGGCAGTTTCCGCGCGCCGCCGTCGCCAGCAGCGCCCAGCACACCATCACCACCACCATCACCGGCTGCCTTTGCTGCCGCTGCCTCACCATCACCACCATCTTCTTCTTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTATATATATATAATATATTCCAGTTTCCAGATC
More
|
||||||||||
| CDS seq | ATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGTAATACCCTTCCATCTTCTCAAACTCCATTGGTTTATGTACCGCCTCTCACTTCTTACTCTCTGTCCAACCATTTTCAAGGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGGTCAGTATGCAATCGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTTCATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTACCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGA
More
|
||||||||||
| Protein seq | MHNTAKAFMTEGKVATDPVAIDAPGGFLFEWWSIFWDIFDARTRDKPPQPQPQPPPPIPIDIKSREQQMRLQLLQQQQNAHQQRRDPPLNAAMDALNSDVSAVLASKMMQDRMRNPNPTDSDASHQLLDANRIALLKPATNQTGQLVQGASVNMSALQQIHSRNQQPVIPFHLLKLHWFMYRLSLLTLCPTIFKDMKGDAAMSQRSMPTDPSTLYGSGMMQPKSGLVSTGLNQGVGSVPLKGWPLTVPGIDQLRSNLGVQKQLMASPNQFQLLSPQQQLIAQAQSQNDLARMGSPAPSGSPKVRPDESDYMMKVSMQSDNLDSFVDFDENVDSFLSNDDGDGRDIFASLKKGSSEQDSLKGLSLSEFGNNRTSNNKVVCCHFSTDGKLLASAGHEKKVFLWNMDNLNMDTKIEEHTNFITDIRFKPNSTQLATSSSDGTVRLWNAIERTGAVQTFHGHSSHVTSVDFHPKSTEVLCSCDDNGEICFWKIGQSKVSRISRMKQGGTGRVRFQPQIGQLLAVATGSIVNIVDVEKEASLHSLPKVHTNEVNCICWDEKGERVASVSQDTVKVWSVASGACIHELRSHGNQYQSCIFHPRYPNVLIVGGYQTMELWSLSDNHRNTVQAHEGLIAALAHSQFTGMIASASHDRSVKLWK |
||||||||||
| Function | Transcriptional corepressor LEUNIG_HOMOLOG [UniProtKB/Swiss-Prot:O48847] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0043000 | OsAzu_03g0043000.01 | Chr03 | 38351025 | 38357867 | + | NAM | ||
| CDS seq | ATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGTAATACCCTTCCATCTTCTCAAACTCCATTGGTTTATGTACCGCCTCTCACTTCTTACTCTCTGTCCAACCATTTTCAAGGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGGTCAGTATGCAATCGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTTCATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTACCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGA
More
|
|||||||
| Protein seq | MHNTAKAFMTEGKVATDPVAIDAPGGFLFEWWSIFWDIFDARTRDKPPQPQPQPPPPIPIDIKSREQQMRLQLLQQQQNAHQQRRDPPLNAAMDALNSDVSAVLASKMMQDRMRNPNPTDSDASHQLLDANRIALLKPATNQTGQLVQGASVNMSALQQIHSRNQQPVIPFHLLKLHWFMYRLSLLTLCPTIFKDMKGDAAMSQRSMPTDPSTLYGSGMMQPKSGLVSTGLNQGVGSVPLKGWPLTVPGIDQLRSNLGVQKQLMASPNQFQLLSPQQQLIAQAQSQNDLARMGSPAPSGSPKVRPDESDYMMKVSMQSDNLDSFVDFDENVDSFLSNDDGDGRDIFASLKKGSSEQDSLKGLSLSEFGNNRTSNNKVVCCHFSTDGKLLASAGHEKKVFLWNMDNLNMDTKIEEHTNFITDIRFKPNSTQLATSSSDGTVRLWNAIERTGAVQTFHGHSSHVTSVDFHPKSTEVLCSCDDNGEICFWKIGQSKVSRISRMKQGGTGRVRFQPQIGQLLAVATGSIVNIVDVEKEASLHSLPKVHTNEVNCICWDEKGERVASVSQDTVKVWSVASGACIHELRSHGNQYQSCIFHPRYPNVLIVGGYQTMELWSLSDNHRNTVQAHEGLIAALAHSQFTGMIASASHDRSVKLWK
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0043000 | OsAzu_03g0043000.02 | Chr03 | 38351017 | 38357391 | + | IsoSeq | ||
| CDS seq | GGCAGGAAGGCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTCCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGCGATTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTCGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACAC
More
|
|||||||
| Protein seq | GRKASQFDRREEGWGPIVSDAWFHFFLLCCWIPVPGEASGKSKSAHERDCECERERERERFDWSWRPSRRRRRRRLFLLLLVDGAEQLGGRQDAGCVHLRLPGEAQHAQH |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr03 | 38352141 | 38352397 | + | OsAzu_03g0043000.01 | OsAzu_03g0043000.01,OsAzu_03g0043000.02 | All |
| A5 | Chr03 | 38351297 | 38351426 | + | OsAzu_03g0043000.01 | OsAzu_03g0043000.01,OsAzu_03g0043000.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.569257 | 16.792318 | 7.169548 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0860900 | RBH | 2.683527 | 2.016013 | 4.451800 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g64300 | RBH | 1.308799 | 1.294216 | 1.622619 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0860900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0042630 | RBH | 0.480186 | 2.916886 | 3.161838 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0042740 | RBH | 1.835885 | 9.302526 | 9.748507 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0042960 | RBH | 0.287068 | 0.285057 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0042490 | RBH | 5.374372 | 16.664757 | 19.120916 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0621200 | RBH | 4.5719155 | 11.570769 | 9.378128 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0042230 | RBH | 0.210392 | 0.597871 | 3.215214 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0622200 | RBH | 5.942985 | 12.4181195 | 16.33765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0042740 | RBH | 0.113822 | 0.167333 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0042710 | RBH | 0.412456 | 9.124255 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0042400 | RBH | 9.311798 | 13.952103 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0042440 | RBH | 0.611264 | 1.131388 | 1.178119 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0042520 | RBH | 0.233217 | 9.479305 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G042290 | RBH | 0.343045 | 2.331761 | 3.998225 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0041900 | RBH | 2.005997 | 23.070816 | 10.203368 |
