Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_03g0040090 | OGI:03096370 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr03:36569819-36574630 | ||||||||
| Gene Symbol | RLCK118, OsRLCK118 | ||||||||||
| DNA seq | ACCCTTTTCCCCGGAAGAAGCCACGCGGGAAGCAGCAGCAGCCAGCAGCAGCGGCGTGGCTGCGCGGGCCGCCTCGCTCCCTCTCCCTCTCCGCTTGGCCGCTTCCCTTGCCCCCGCCATTAACTCCTCACTCGCTCGCCTCACCTCACGCGCCGCACGCCACATCTCTCGCCAGCGAGCGCACCTCGTCCTCGTCGCTATATAGCCAACGCCTCCGCCTCCGCCTCCGCCTCGCGCTTGGTGTCCCCCAAAACCCTAGGTGGAGCTCTCCTCCCCCCTCACCCCATGCGGCGCCGCCGGGTCGGGACGGCGGGAGGGTTGGTTCGATCCTGACTGGGCTCGGCGCCGCGGGCGAGTCGCTTGTTGGAGGGGGATGGGGAATTGCTGTGGGTGGGGCGCGCGGATCAAGGATGGGAGCCCGCAACCGGGAGCCTCTGGTATGCTTCGCGATCCTTCCTCTCTCTCTCTCTCTTGCTGCCTGCGTGCGTGCTTGCTTTGCCTGGTTATGGTGCTGTTTTGTTTCATGATTCGATGGGTTGCCGGCTTCAATCGCGTAGATGCATGATTCCTTCAGTCCGTTTCCATTTTACTCGGATTGTTTATGCCACGAGATGTGATGGCATGTTCGATTAGTTTATGGTGATTCCGGTGGAGTTTCGAAGCCGTGGAGTCTTTGTTGCTGCGCAGAATTTAGCTTGTGTTGCAATCGTATGAACATTAGCATTCGGGTTATTTTCTTCTAGAAATTTTGATTTCCACAGTACAGGTGAATAAGCTACTTCGATCTTGTTTGGATGATTTGGCTTGTTAGATAGGCATACTCCTGATGATCCAATTGTTAATTTGACTAGATGATTTCAACCCTTTAGCTACACCGTGGCATCCTCAATATGTTAAGCTATGTGCCAACGTAAGACTTTACAATCACTTTTTTTTTAGAGAAGTTTAGTTCAAGCTTCGGCTGTGCTGTGCCTGTAAGGCTCTGTAGGTGGTTGTGCCATTGGAGCTAAGGCCTTAAATTATTAGGTGAGGGGGTACATTCTTATGTGTATTGATGGGGATATCCAGGCTTCATTCATTGCTTGATATCGTTAACTAGTACCATGTGTAGTAATGTTGTACTACCATCTACTGGATAGACCCAGTACTGGATTCCTCCAACCATGGCAGCTCGTAATTGGCATGACGATGTCTATAATATATTGTGTTGACGACGAAAGGTAACATTTGATTGAAGCAAGTCTGCTAGTAATGCGTATAGTAACCTTTTTATGGCATTCTGTTGTGAATATTTGCAGTTGACATATTATATGTTCTTGTTGCAAAATGTCTCAAAAGAATTTATGGGACAGCTTGTTAAGAAAAACAATACTGTTAGATTAGTTGTTTCTCTATTGCAATTGATTTTTTTTATGTGTTGTTAGTTCATAAATTATTGATAGAATGAGGAAAAATCTTAGATTCTTATTTAGTTTGAATTTGATGCTATGGTATGAGATTGGATCGTGTGTGTTTTTTACTCGTCCTGTCTATTTAATTTGGTTTGCCGCCCAGATTTAGCAATGTTCTGTCAATAATTGATTATGTACTTTACATGGCTTGAGGCGGTTAGACATAACATCACAAACCTTTTCTCTTTTCCAGTTACAACATACACTTTTTGGTTGTATCAAGATCGATTATTTGCTTAGTATTCAGTAATCTGAATATATGAAAATGACCGTGTATGCCTCATTAAAGTTCTATGTAATTACAAAGACTATAGCTCACTTCTATGTCAGGTGCTTCATTTTGATTTGAACTTAGTTGATTCATATCATAACGGCTACTTAAGAAATGTATTATTACTAAAGATAGAGTAGATAAATATGAGCTTTCTGGAGAGCCGCATGGTAGCGGATGTACTTCTGATGGAATAAGGTTACTAGCGCATATGATTGTTTCCAGTTTCTGGTTGGGTGGGAACTCCCCCTGTTCCCATTATATTCATGGCTACTACTCTATGCAAAATCGTCATTTTGTTATTTTAAACCAGAGCACATCATCATTCGTAAGCTGATAGCAAATCTAGTATATCTAGTAGTGCTACATGTAGGCGCGTGGCAATTGGCTGATAGCAAATCCTTCATCTGTCAGGACTCATACCAAATTTTAGCGAAGGATCAACTGATGATTGATTTAGTTGATTCCTAATTAATGTGCAAAGCTTCCTTTTAAAAATAGAATTGAACATTCAGAACATTATATACATTATTACTGTGCTATCATACTATGGACCTGGGAAAGATTAGTACTGGGACTTTTTTCTAGAGAACTTCTAGATTACAGCTAAATGCAGTCATGTGCTTTCTACTCATTATAACTGTACCAAATGTATGCAGGGATGTTCTCAAGGAGTGGTGCTAAAGATGGGAGTAGGCTTAGTGGCTGCAGTAGTCGAGCCTCTTCAGCTTCCATGCCTCCAACTGCGAAAACTGAATGTGAGATACTGCAGTCAGCCAATGTGAAGATCTTCAGTTTTAGTGATCTCAGGATAGCCACAAGGAACTTCCGTCCTGACAGTGTACTTGGTGAAGGAGGGTTTGGATCTGTCTATAAAGGATGGATTGATGAGAATACATTATCTGCTTGCAAGCCTGGCACTGGAATTGCTGTTGCTGTGAAAAGACTCAACCAGGAGAGTTTGCAAGGGCACCGAGAATGGTTGGTGAGTATGACTGCTATTCTATGTTGTGTTGCCTTCAAATCCATGCTTGTTTTAAGTATACCATTGGATACAGCTTTTGTCAATCATATACTTGTTTTTTTTATCCTTTTGAAAGGTTACTTGGATATTTTCTAACTTTGATGTATAAATATTCAATATGTAGGCAGAAGTTAATTACCTAGGTCAGTTTTGCCATCCCAACCTTGTGAAGCTATTTGGGTATTGCTTAGAGGATGAGCATCGACTGCTAGTGTATGAGTTCATGCCACGTGGGAGCTTGGAAAATCATCTGTTTAGGAGTAAGTTAAAACAAGACCTGTTCCACTGCTCATCTGGGGGCATTCTTTTCATATTGCATACACTATTGCCACGTGTTCCTTTTATCATAAATTGCTATCTGAATCATGTTGCAGGAGGTTCGCATTTCCAGCCTCTTTCATGGAACCTAAGAATGAAGGTTGCACTTGGAGCTGCAAAAGGACTAGCTTACCTTCACAGTTCAGAGGCAAAAGTTATTTATCGAGATTTCAAGACTTCCAATATTCTGCTTGACACAGTAAGTGAAAGTAAATCTTTGATAACCAACTTCACTTCAGTGCGCATGTATCCCTGCTGAAAGGAATGTATTATATTACTGTTCAGGACTATTCTGCAAAGCTATCTGATTTTGGATTGGCAAAGGATGGTCCTGTTGGTGAGAAGAGCCATGTATCCACGAGGGTGATGGGAACATATGGTTATGCTGCTCCAGAATATCTTTCAACAGGTAACCTGTGAAGTGTAGTTTTTGGTATTCAGTTTTCTCCATGTTTTCTGATCTTGGATTAGAAAATTCATACATTGGCAGGCCAGGTAGTTGTCTACAGTAAATTACATGAATTGTTATAGCTATAAGCATATTAATAACGTGGAATTGTTTTTTACGCATCCTCCACATCGGAAATGTCATTTTATGACATTCTTTGCATTGTTGACTTTGGGAATGTGATCTAGCTTAGAATCTAACTCATCTAAGCATGAACATATGAACACTCCAATGTATTGCTTTCCATGAATTTCATATACACCTTTTCTGCATGCGCACTCCTTGGGGAATGATATATATGGCTTGATGTTTAGTTTAATCTCAATTGCAAAATGTACATGGAAGGATGTTGGGAAACAAATCATTGTTTGCCATACGTTGTGAGCTTTTATTTACTGTGGACCTGTTGCAATTATGTGCATTTAGTGATTTACATCACCGTGTTATTTTTAGAACGATGTACCAGAAGTGCATGTACAATATGCCTTGAGCTTTGTTTTATTGTATCAATACTTTCAGGCCATTTAACTGCGAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTGCTGGAGATGATGTCAGGTCGTCGTGCCATTGACAAGAACCGGCCCCAGGGTGAACACAATCTTGTGGAATGGGCCCGACCATACCTCACACATAAGCGCAAGATATTCCGTGTCCTGGATACCAGGCTAGAAGGTCAATACTCTCACGTTGGAGCACAAACAGTTGCCACCCTTGCTCTTGAGTGCCTGTCGTACGAAGCTAAGATGAGGCCTTCTATGGAAGCTGTGGTCACTATTCTTGAAGAGCTTCAAGAATCCAGCCATGTGGACAGGAAACCAGCAGCAGAGAGGCGTCAAGAATCCACCACAGGTACAGGCAAAAAAGCCCCTACTGCAAATGCTAGCAAGAACAGCGGTAAGCCTCGTCGGAAAAGCTTGGGAGAAACTCGGGAAAAGATTGGTCCGAATCCAACAGCATTGGTCCGCTCCCATTAGCAAGGCAGAATGTGAGTGTCATTAGTTGGTATTTGGTAGTTTGTAAATATGTTGTGCATATTCCTTGTTGTCATCAGTCTTTTGGCAACAAGTCCTTTTTGTGCATTATCATGAGCTTCTTAACTTCAGCTAACTAGATGCTGTTGTATGTCGAAACTCATGGCATTAAAGTAGAGCTCATGTTACAAATCTGGCGTGGCTGTCTCAATGGGTTCAAGCTTTCCTGGTAGCTCATCGATCAGCATGCACCATAGGTACATTGTCATCAACACATCATTGGATCATACTGAGTGGTGTCT
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| CDS seq | ATGGGGAATTGCTGTGGGTGGGGCGCGCGGATCAAGGATGGGAGCCCGCAACCGGGAGCCTCTGGGATGTTCTCAAGGAGTGGTGCTAAAGATGGGAGTAGGCTTAGTGGCTGCAGTAGTCGAGCCTCTTCAGCTTCCATGCCTCCAACTGCGAAAACTGAATGTGAGATACTGCAGTCAGCCAATGTGAAGATCTTCAGTTTTAGTGATCTCAGGATAGCCACAAGGAACTTCCGTCCTGACAGTGTACTTGGTGAAGGAGGGTTTGGATCTGTCTATAAAGGATGGATTGATGAGAATACATTATCTGCTTGCAAGCCTGGCACTGGAATTGCTGTTGCTGTGAAAAGACTCAACCAGGAGAGTTTGCAAGGGCACCGAGAATGGTTGGCAGAAGTTAATTACCTAGGTCAGTTTTGCCATCCCAACCTTGTGAAGCTATTTGGGTATTGCTTAGAGGATGAGCATCGACTGCTAGTGTATGAGTTCATGCCACGTGGGAGCTTGGAAAATCATCTGTTTAGGAGAGGTTCGCATTTCCAGCCTCTTTCATGGAACCTAAGAATGAAGGTTGCACTTGGAGCTGCAAAAGGACTAGCTTACCTTCACAGTTCAGAGGCAAAAGTTATTTATCGAGATTTCAAGACTTCCAATATTCTGCTTGACACAGACTATTCTGCAAAGCTATCTGATTTTGGATTGGCAAAGGATGGTCCTGTTGGTGAGAAGAGCCATGTATCCACGAGGGTGATGGGAACATATGGTTATGCTGCTCCAGAATATCTTTCAACAGGCCATTTAACTGCGAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTGCTGGAGATGATGTCAGGTCGTCGTGCCATTGACAAGAACCGGCCCCAGGGTGAACACAATCTTGTGGAATGGGCCCGACCATACCTCACACATAAGCGCAAGATATTCCGTGTCCTGGATACCAGGCTAGAAGGTCAATACTCTCACGTTGGAGCACAAACAGTTGCCACCCTTGCTCTTGAGTGCCTGTCGTACGAAGCTAAGATGAGGCCTTCTATGGAAGCTGTGGTCACTATTCTTGAAGAGCTTCAAGAATCCAGCCATGTGGACAGGAAACCAGCAGCAGAGAGGCGTCAAGAATCCACCACAGGTACAGGCAAAAAAGCCCCTACTGCAAATGCTAGCAAGAACAGCGGTAAGCCTCGTCGGAAAAGCTTGGGAGAAACTCGGGAAAAGATTGGTCCGAATCCAACAGCATTGGTCCGCTCCCATTAG
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| Protein seq | MGNCCGWGARIKDGSPQPGASGMFSRSGAKDGSRLSGCSSRASSASMPPTAKTECEILQSANVKIFSFSDLRIATRNFRPDSVLGEGGFGSVYKGWIDENTLSACKPGTGIAVAVKRLNQESLQGHREWLAEVNYLGQFCHPNLVKLFGYCLEDEHRLLVYEFMPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAYLHSSEAKVIYRDFKTSNILLDTDYSAKLSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYLSTGHLTAKSDVYSFGVVLLEMMSGRRAIDKNRPQGEHNLVEWARPYLTHKRKIFRVLDTRLEGQYSHVGAQTVATLALECLSYEAKMRPSMEAVVTILEELQESSHVDRKPAAERRQESTTGTGKKAPTANASKNSGKPRRKSLGETREKIGPNPTALVRSH |
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| Function | Receptor-like cytoplasmic kinase 176 [UniProtKB/Swiss-Prot:Q65XV8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_03g0040090 | OsAzu_03g0040090.01 | Chr03 | 36569819 | 36574630 | + | NAM | ||
| CDS seq | ATGGGGAATTGCTGTGGGTGGGGCGCGCGGATCAAGGATGGGAGCCCGCAACCGGGAGCCTCTGGGATGTTCTCAAGGAGTGGTGCTAAAGATGGGAGTAGGCTTAGTGGCTGCAGTAGTCGAGCCTCTTCAGCTTCCATGCCTCCAACTGCGAAAACTGAATGTGAGATACTGCAGTCAGCCAATGTGAAGATCTTCAGTTTTAGTGATCTCAGGATAGCCACAAGGAACTTCCGTCCTGACAGTGTACTTGGTGAAGGAGGGTTTGGATCTGTCTATAAAGGATGGATTGATGAGAATACATTATCTGCTTGCAAGCCTGGCACTGGAATTGCTGTTGCTGTGAAAAGACTCAACCAGGAGAGTTTGCAAGGGCACCGAGAATGGTTGGCAGAAGTTAATTACCTAGGTCAGTTTTGCCATCCCAACCTTGTGAAGCTATTTGGGTATTGCTTAGAGGATGAGCATCGACTGCTAGTGTATGAGTTCATGCCACGTGGGAGCTTGGAAAATCATCTGTTTAGGAGAGGTTCGCATTTCCAGCCTCTTTCATGGAACCTAAGAATGAAGGTTGCACTTGGAGCTGCAAAAGGACTAGCTTACCTTCACAGTTCAGAGGCAAAAGTTATTTATCGAGATTTCAAGACTTCCAATATTCTGCTTGACACAGACTATTCTGCAAAGCTATCTGATTTTGGATTGGCAAAGGATGGTCCTGTTGGTGAGAAGAGCCATGTATCCACGAGGGTGATGGGAACATATGGTTATGCTGCTCCAGAATATCTTTCAACAGGCCATTTAACTGCGAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTGCTGGAGATGATGTCAGGTCGTCGTGCCATTGACAAGAACCGGCCCCAGGGTGAACACAATCTTGTGGAATGGGCCCGACCATACCTCACACATAAGCGCAAGATATTCCGTGTCCTGGATACCAGGCTAGAAGGTCAATACTCTCACGTTGGAGCACAAACAGTTGCCACCCTTGCTCTTGAGTGCCTGTCGTACGAAGCTAAGATGAGGCCTTCTATGGAAGCTGTGGTCACTATTCTTGAAGAGCTTCAAGAATCCAGCCATGTGGACAGGAAACCAGCAGCAGAGAGGCGTCAAGAATCCACCACAGGTACAGGCAAAAAAGCCCCTACTGCAAATGCTAGCAAGAACAGCGGTAAGCCTCGTCGGAAAAGCTTGGGAGAAACTCGGGAAAAGATTGGTCCGAATCCAACAGCATTGGTCCGCTCCCATTAG
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| Protein seq | MGNCCGWGARIKDGSPQPGASGMFSRSGAKDGSRLSGCSSRASSASMPPTAKTECEILQSANVKIFSFSDLRIATRNFRPDSVLGEGGFGSVYKGWIDENTLSACKPGTGIAVAVKRLNQESLQGHREWLAEVNYLGQFCHPNLVKLFGYCLEDEHRLLVYEFMPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAYLHSSEAKVIYRDFKTSNILLDTDYSAKLSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYLSTGHLTAKSDVYSFGVVLLEMMSGRRAIDKNRPQGEHNLVEWARPYLTHKRKIFRVLDTRLEGQYSHVGAQTVATLALECLSYEAKMRPSMEAVVTILEELQESSHVDRKPAAERRQESTTGTGKKAPTANASKNSGKPRRKSLGETREKIGPNPTALVRSH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.774772 | 10.985415 | 5.876186 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0821900 | RBH | 3.243985 | 2.598295 | 5.081176 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g60710 | RBH | 1.690131 | 1.499068 | 0.954251 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0821900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0012680 | RBH | 0.571890 | 19.860991 | 4.072548 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0039760 | RBH | 0.293761 | 2.796451 | 2.507864 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0039830 | RBH | 1.796791 | 9.574681 | 6.759548 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0040070 | RBH | 0.284595 | 0.165309 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0039640 | RBH | 6.861488 | 1.757500 | 10.008482 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0588500 | RBH | 5.7831345 | 28.3841915 | 18.4335185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0039390 | RBH | 0.713557 | 0.735793 | 0.716921 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0591000 | RBH | 6.868743 | 25.963416 | 13.3325315 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0039960 | RBH | 0.261587 | 0.127750 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0039890 | RBH | 0.542509 | 4.539670 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0039530 | RBH | 6.204145 | 9.935760 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0039630 | RBH | 1.308573 | 0.588365 | 1.680159 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0039680 | RBH | 0.457415 | 5.712908 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G039440 | RBH | 0.435959 | 2.284097 | 4.885780 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0039190 | RBH | 1.705413 | 10.151644 | 10.361513 |
