Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsAzu_03g0001620 OGI:03002960 | 16/16 Azucena | AzucenaRS1 | Gramene(+IsoSeq) Chr03:1102344-1106900
Gene Symbol RIM1, ONAC054, ONAC54, NAC54, ONAC054alpha, ONAC054beta
DNA seq

GTTCTTCCTCTCTCATGTGCCATTAGCCAATAGCATCAAGGTCTCCTCTCTTCCTCCTCGATCCTCTTCATTTTGTCTTACTTGCATGACATTCTTGTTAACTCATCTGTGTGTTATTGTATGTTGCAGGTTTTTGTACATTGTAGCTGATTATAATTCATTCATATAGCTATTCAAACAAGTTCGGTGGCTGTCCACATTTTAGCTTTGGATAGCCGGCTTGCCAGCTGCCTGCCTAGCTCTAAGCATCTCTTGCTGTTGGAGTTTTGAGAGGAAGGCTAGAGGAAGCATATGGCGCCCGTGAGTTTGCCTCCAGGTTTCAGGTTCCACCCCACCGATGAAGAGCTAATCATCTACTACCTTAAGCGGAAGATCAACGGAAGACAGATAGAACTCGAAATCATTCCAGAGGTTGATCTTTACAAGTGTGAGCCTTGGGATCTGCCTGGTATGTTCTTAGTTTGCTTGTTCTAAAGATATCTATTCCTAGTTTTTATGTTGCTTGTTGGTGGTAGAAGTTAGAATGCTGTAGCCCATGCTAGGATATATATTTCAATCCAACCCTAGGCCCATGCAGCTATCACCAATTGGCGTTCTTATATATCATTCTCTTGCTATATAGGAGTAACAGTTTCTTTCTTTTTGTTTTAAGGGTAGGAATAGCAGTTTCATGATATATAATTTGTATGAGACTTTTGTATAAATGCTATAAGGACAAGTTTTAAGTTTATATGCATGTTAAAATTCAGGTTAACAATTAACTATAGGCAAGCATGCACCTTTATTGTTCTCCAAGGAAAGCACATATATAGGTCCAGTATGTTTATTGGATGCCGTGTTATGTAGACACTAAGCAATCTTATTCAATTCTTATACTATTATGCCCTCCCAAGAAACACCAGTGCCTACACTACTTGAGGAAAGAATAACCACATGTTCCCTTCTTGATGAGCACTTCATCTAGCTATTTGTAGTTGAAATGTATGTAATAATAATCACTAATTAATCCTGGCTATAAATGTGTAGCTCTATCTGTTGTTTTAGTTTTTCTTTTATTTCACATAAGTAGCTTTTATGTCATTTATGTCACAAAAGAAAAGGTTTCCATGATTAATTTGTAAATTTTGGTACATTTGAATTGCTAGTTATATCAAAGCATATTTGATTTTTTTTCTCTTTATATATAAAAAATCAAGCATTGTCAAAAGCGATGTTTCACTGTCATAGCTTTGTGTGAAAACAAGATTAATCATACTGTGAAATTTGCTTTACTTTCAAACATCTTATGCACACCGAAAGGAGGGATATTGATAGATCTTGATCCTTTTGTCAAAAGAAATTTACCTTCAAAAAGAAACGTCAAATTTCTGCCAAGTGTAAAGGTGACATTATATACGTCCATGCACTGAGATACTTGAAATGGAAAATAAATCTTTTATATCAGTAACATCAAAGTTAAAGTTTATATATTTTGGACCATGTCACAATCACAGAGAGATTTGAGGAAAAGATATATTCTCTCTTTATCCACTTGCTGTTTGCTTTCAAGCTTGACAGTTTACTACAAAAACACCATGTAGCATTCAACATTCTACGAAGCGAGTGCTGTAAAAATATCGAATAAAAAGAGAAAATAAAGATGAGCCTTTTTTCTTAGGGTGACAAAATAAAGCAAGAAACTAAGAAAGGAACTTGTGATGAACATATAGGTCAAGAAGATGAACAAAAGTCCGCACAGCCTCCAAGAGATATAAAGTGACCTTGGTCTAATTTTCTTTCAGCTATGGTGGGCTATCATGTTAAATAGCCATATCTTAACTCTGTCATTAGATCCAATCATGATAGTAGACAAGTACTTCAATGTTTATGCTGCATGCATGATTATGTATGACTTTTTGTTTGTATGACACCCCCTAACTGATCGTTCAATATTCAGAAAAATCCTTTCTTCCGAGTAAAGATCTCGAATGGTACTTCTTCAGCCCTAGAGACCGCAAGTACCCAAATGGATCAAGGACGAACCGTGCAACAAAAGCCGGATACTGGAAGGCAACTGGGAAAGATCGAAAAGTGAACTCACAGAGGCGTGCAGTTGGTATGAAGAAGACTCTTGTGTACTACCGTGGTCGAGCTCCACATGGTTCTCGCACCGATTGGGTCATGCACGAGTACCGCCTCGATGAGAGGGAATGCGAGACTGACACTGGCTTACAGGTGTGTTACTATTAATCTTGTTGCATTTTTAAATCTACAACCATAATATATGGATAAACCATATATGTTATATTTAGCCCTTCTTTTCTGAAATTATAAACCTAGAGTAAAATATGTTACTAGCTGCTTGACATGGACGCGGCCTCTGATATGCAACCTCTTTGCATTTGTGTGTCTATATGTAGGATGCATATGCTTTATGCCGGGTGTTCAAGAAGACAGCGCCCGGGCCAAAGATCATAGAGCATTATGGTGTGGTGCACCACCATGTCGAGCAACCTCAATGGATGACGAGCAGTATCGATCGCTCCCCAACGTTGGACGTGTCGTGTGATGGAAGAGGTGATGACTTTGAGAGCAGCAGCTTCTCTTTCCCAACAGAGACGCCAATGGACTCCATGCACGGTGGGTTTGGAATGCAGATGAGTGCACCTCACGAGGATGGCAAATGGATGCAGTTTCTGAGTGAAGATGCCTTCAACGCCACCAATCCATTCTTGACGAACCCAGTTTCTGCCAACTTCTCATGCCTTCCATCCAAGGTACATATACATATATAGTCAAAAATGAAGGTTACTTACTGGTACAGATGACATGTATATTCAGGCAATGAGTTCTTACCGGTGCAATGATATTCATATGCAGGTGGATGTTGCACTGGAATGTGCGAGGCTGCAGCACAGGCTCACCTTGCCTCCCTTGGAGGTGGAGGATTTCCCACAGGACGTCAGCCTTGACACGAAGATTGGCATACTTCGCAGTAACCCCAACGAAGTTGACATTCTCCAAGAATTCCTGTCAGTTGCGACTGCCTCTCAGGAGCTAATTAATGGCTCCACCAGTAGCTACCCTGAAATGTGGTTAGGAGCTAGCACAAGCAGTGCTAGCTACGTCAATGAACTGTCCTCTCTAGTTGAGATGGGCGGCGTTGGCACTTCTAACCACCACGAATCCGCAAGGCTACAGGTCGAGATCGCTGACATGGAGGTGTTCAAGGACGAGAAGAAGCGGGTGGAGAACCTTAGAGGAGTCAAGTTGGTGAACAATGACCTTGGGGAGGTAATTGTTTGCATCATACCTATACAAGTATATTCCCATCATTATATATATACTACATCTCATGAGACTGATTACTTTCATGCTTCATTTGTCTCAAGCAGATTGTTGTAGAAGGAGATGAAAGCAATCCAACAGAAGACATCATCGCGCAGTACCCTATAAAAGTCACTGCAGATAATTCAGGTATGTAATATTTAATTTTGGCTGTTTTACATGGGCTCCACAGAAGTAATTAGCAGTATTCCATATTCGATACAGACTGTATACAGATACAGTTCTTGCATGCACTAACTCAGAGCTAGATTGCAGGAGAAGCCGGTCATCGCATGACCGATCCCACTGACGTAGGCGGCATCGACACTGCCCCGATCTTCTCGCAATCTCAACCTGACGACTTTGCTGCTGGTTTCGACGACGTCAACCCTAATGCATCTTTCGATCTGTACGAGAAGGTTGACGTCAACCACAGGCTATTCGTTTCAAGGGTCGCTGCGGCGAAGACATTCTTCCACCGCATTGAGCCATCGAAGAAGGTCAGCTTCCACTCGAACCCGGCAGCAACCGCCGTCAGTAAGGCGACCGAGAAGTTCCATTTCCCCGTTACGACCAAAGTTAGTGGTAGGGTTTCCATTTTTAGCAAGTTCAAGGCACTCATAAGGGACAAGTTCTTGATGATGAGGCCATCACATTCATACCAAAGGTTGGGCAGCAAAGAAACCACAGTGAATGAGCTGCTGCAGATTGTGTCACTCCTTTTAGCACCGAAGCAAATCAATGGCTGCCCTACTGAGCAAGAGCTGGTCAAGAAGAAGGCGAAAGAAGTGATGAAGCCGGGATGGGGTCGTGAAGGGAGCAACAAATTGTGGCTTCCGCTCTCCAAAGGGAAGGGCATTTCCAGCATGTTTTTGAGTGGGAAATGGACGTTTCTAACCTCCGCGTTGGCCATCAGCACTCCAGCTGAGTGTGATCACTAAAAGGTCTTTTCCATGACTGTCAATTAATGACACTACTGTTATATAATCTGCTATAACCTCAGTAGCGCGAGCCTAGCTAGTGCATGAAGAGAAGGTTAACATTAATTAACTGTCTTCGTGTCTCTGTTATTAACTGGTGTATAACTGGAGAATGTATGTCAATTAATTATTATTTGTTCGTCGTCCATTCTAAGTCTAACCCTGTTGTATCAAAATACTATCGTTAATTTGTAAGTGCAAATACAGATGTATACATATATATACATGTAAACACACATAATGTTCAATATTAATTGTATTTGTTTCATTC

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CDS seq

ATGGCGCCCGTGAGTTTGCCTCCAGGTTTCAGGTTCCACCCCACCGATGAAGAGCTAATCATCTACTACCTTAAGCGGAAGATCAACGGAAGACAGATAGAACTCGAAATCATTCCAGAGGTTGATCTTTACAAGTGTGAGCCTTGGGATCTGCCTGAAAAATCCTTTCTTCCGAGTAAAGATCTCGAATGGTACTTCTTCAGCCCTAGAGACCGCAAGTACCCAAATGGATCAAGGACGAACCGTGCAACAAAAGCCGGATACTGGAAGGCAACTGGGAAAGATCGAAAAGTGAACTCACAGAGGCGTGCAGTTGGTATGAAGAAGACTCTTGTGTACTACCGTGGTCGAGCTCCACATGGTTCTCGCACCGATTGGGTCATGCACGAGTACCGCCTCGATGAGAGGGAATGCGAGACTGACACTGGCTTACAGGATGCATATGCTTTATGCCGGGTGTTCAAGAAGACAGCGCCCGGGCCAAAGATCATAGAGCATTATGGTGTGGTGCACCACCATGTCGAGCAACCTCAATGGATGACGAGCAGTATCGATCGCTCCCCAACGTTGGACGTGTCGTGTGATGGAAGAGGTGATGACTTTGAGAGCAGCAGCTTCTCTTTCCCAACAGAGACGCCAATGGACTCCATGCACGGTGGGTTTGGAATGCAGATGAGTGCACCTCACGAGGATGGCAAATGGATGCAGTTTCTGAGTGAAGATGCCTTCAACGCCACCAATCCATTCTTGACGAACCCAGTTTCTGCCAACTTCTCATGCCTTCCATCCAAGGTGGATGTTGCACTGGAATGTGCGAGGCTGCAGCACAGGCTCACCTTGCCTCCCTTGGAGGTGGAGGATTTCCCACAGGACGTCAGCCTTGACACGAAGATTGGCATACTTCGCAGTAACCCCAACGAAGTTGACATTCTCCAAGAATTCCTGTCAGTTGCGACTGCCTCTCAGGAGCTAATTAATGGCTCCACCAGTAGCTACCCTGAAATGTGGTTAGGAGCTAGCACAAGCAGTGCTAGCTACGTCAATGAACTGTCCTCTCTAGTTGAGATGGGCGGCGTTGGCACTTCTAACCACCACGAATCCGCAAGGCTACAGGTCGAGATCGCTGACATGGAGGTGTTCAAGGACGAGAAGAAGCGGGTGGAGAACCTTAGAGGAGTCAAGTTGGTGAACAATGACCTTGGGGAGATTGTTGTAGAAGGAGATGAAAGCAATCCAACAGAAGACATCATCGCGCAGTACCCTATAAAAGTCACTGCAGATAATTCAGGAGAAGCCGGTCATCGCATGACCGATCCCACTGACGTAGGCGGCATCGACACTGCCCCGATCTTCTCGCAATCTCAACCTGACGACTTTGCTGCTGGTTTCGACGACGTCAACCCTAATGCATCTTTCGATCTGTACGAGAAGGTTGACGTCAACCACAGGCTATTCGTTTCAAGGGTCGCTGCGGCGAAGACATTCTTCCACCGCATTGAGCCATCGAAGAAGGTCAGCTTCCACTCGAACCCGGCAGCAACCGCCGTCAGTAAGGCGACCGAGAAGTTCCATTTCCCCGTTACGACCAAAGTTAGTGGTAGGGTTTCCATTTTTAGCAAGTTCAAGGCACTCATAAGGGACAAGTTCTTGATGATGAGGCCATCACATTCATACCAAAGGTTGGGCAGCAAAGAAACCACAGTGAATGAGCTGCTGCAGATTGTGTCACTCCTTTTAGCACCGAAGCAAATCAATGGCTGCCCTACTGAGCAAGAGCTGGTCAAGAAGAAGGCGAAAGAAGTGATGAAGCCGGGATGGGGTCGTGAAGGGAGCAACAAATTGTGGCTTCCGCTCTCCAAAGGGAAGGGCATTTCCAGCATGTTTTTGAGTGGGAAATGGACGTTTCTAACCTCCGCGTTGGCCATCAGCACTCCAGCTGAGTGTGATCACTAA

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Protein seq

MAPVSLPPGFRFHPTDEELIIYYLKRKINGRQIELEIIPEVDLYKCEPWDLPEKSFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNSQRRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDERECETDTGLQDAYALCRVFKKTAPGPKIIEHYGVVHHHVEQPQWMTSSIDRSPTLDVSCDGRGDDFESSSFSFPTETPMDSMHGGFGMQMSAPHEDGKWMQFLSEDAFNATNPFLTNPVSANFSCLPSKVDVALECARLQHRLTLPPLEVEDFPQDVSLDTKIGILRSNPNEVDILQEFLSVATASQELINGSTSSYPEMWLGASTSSASYVNELSSLVEMGGVGTSNHHESARLQVEIADMEVFKDEKKRVENLRGVKLVNNDLGEIVVEGDESNPTEDIIAQYPIKVTADNSGEAGHRMTDPTDVGGIDTAPIFSQSQPDDFAAGFDDVNPNASFDLYEKVDVNHRLFVSRVAAAKTFFHRIEPSKKVSFHSNPAATAVSKATEKFHFPVTTKVSGRVSIFSKFKALIRDKFLMMRPSHSYQRLGSKETTVNELLQIVSLLLAPKQINGCPTEQELVKKKAKEVMKPGWGREGSNKLWLPLSKGKGISSMFLSGKWTFLTSALAISTPAECDH

Function NAC domain-containing protein 86 [UniProtKB/Swiss-Prot:Q9FFI5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsAzu_03g0001620 OsAzu_03g0001620.01 Chr03 1102344 1106900 + NAM
CDS seq

ATGGCGCCCGTGAGTTTGCCTCCAGGTTTCAGGTTCCACCCCACCGATGAAGAGCTAATCATCTACTACCTTAAGCGGAAGATCAACGGAAGACAGATAGAACTCGAAATCATTCCAGAGGTTGATCTTTACAAGTGTGAGCCTTGGGATCTGCCTGAAAAATCCTTTCTTCCGAGTAAAGATCTCGAATGGTACTTCTTCAGCCCTAGAGACCGCAAGTACCCAAATGGATCAAGGACGAACCGTGCAACAAAAGCCGGATACTGGAAGGCAACTGGGAAAGATCGAAAAGTGAACTCACAGAGGCGTGCAGTTGGTATGAAGAAGACTCTTGTGTACTACCGTGGTCGAGCTCCACATGGTTCTCGCACCGATTGGGTCATGCACGAGTACCGCCTCGATGAGAGGGAATGCGAGACTGACACTGGCTTACAGGATGCATATGCTTTATGCCGGGTGTTCAAGAAGACAGCGCCCGGGCCAAAGATCATAGAGCATTATGGTGTGGTGCACCACCATGTCGAGCAACCTCAATGGATGACGAGCAGTATCGATCGCTCCCCAACGTTGGACGTGTCGTGTGATGGAAGAGGTGATGACTTTGAGAGCAGCAGCTTCTCTTTCCCAACAGAGACGCCAATGGACTCCATGCACGGTGGGTTTGGAATGCAGATGAGTGCACCTCACGAGGATGGCAAATGGATGCAGTTTCTGAGTGAAGATGCCTTCAACGCCACCAATCCATTCTTGACGAACCCAGTTTCTGCCAACTTCTCATGCCTTCCATCCAAGGTGGATGTTGCACTGGAATGTGCGAGGCTGCAGCACAGGCTCACCTTGCCTCCCTTGGAGGTGGAGGATTTCCCACAGGACGTCAGCCTTGACACGAAGATTGGCATACTTCGCAGTAACCCCAACGAAGTTGACATTCTCCAAGAATTCCTGTCAGTTGCGACTGCCTCTCAGGAGCTAATTAATGGCTCCACCAGTAGCTACCCTGAAATGTGGTTAGGAGCTAGCACAAGCAGTGCTAGCTACGTCAATGAACTGTCCTCTCTAGTTGAGATGGGCGGCGTTGGCACTTCTAACCACCACGAATCCGCAAGGCTACAGGTCGAGATCGCTGACATGGAGGTGTTCAAGGACGAGAAGAAGCGGGTGGAGAACCTTAGAGGAGTCAAGTTGGTGAACAATGACCTTGGGGAGATTGTTGTAGAAGGAGATGAAAGCAATCCAACAGAAGACATCATCGCGCAGTACCCTATAAAAGTCACTGCAGATAATTCAGGAGAAGCCGGTCATCGCATGACCGATCCCACTGACGTAGGCGGCATCGACACTGCCCCGATCTTCTCGCAATCTCAACCTGACGACTTTGCTGCTGGTTTCGACGACGTCAACCCTAATGCATCTTTCGATCTGTACGAGAAGGTTGACGTCAACCACAGGCTATTCGTTTCAAGGGTCGCTGCGGCGAAGACATTCTTCCACCGCATTGAGCCATCGAAGAAGGTCAGCTTCCACTCGAACCCGGCAGCAACCGCCGTCAGTAAGGCGACCGAGAAGTTCCATTTCCCCGTTACGACCAAAGTTAGTGGTAGGGTTTCCATTTTTAGCAAGTTCAAGGCACTCATAAGGGACAAGTTCTTGATGATGAGGCCATCACATTCATACCAAAGGTTGGGCAGCAAAGAAACCACAGTGAATGAGCTGCTGCAGATTGTGTCACTCCTTTTAGCACCGAAGCAAATCAATGGCTGCCCTACTGAGCAAGAGCTGGTCAAGAAGAAGGCGAAAGAAGTGATGAAGCCGGGATGGGGTCGTGAAGGGAGCAACAAATTGTGGCTTCCGCTCTCCAAAGGGAAGGGCATTTCCAGCATGTTTTTGAGTGGGAAATGGACGTTTCTAACCTCCGCGTTGGCCATCAGCACTCCAGCTGAGTGTGATCACTAA

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Protein seq

MAPVSLPPGFRFHPTDEELIIYYLKRKINGRQIELEIIPEVDLYKCEPWDLPEKSFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNSQRRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDERECETDTGLQDAYALCRVFKKTAPGPKIIEHYGVVHHHVEQPQWMTSSIDRSPTLDVSCDGRGDDFESSSFSFPTETPMDSMHGGFGMQMSAPHEDGKWMQFLSEDAFNATNPFLTNPVSANFSCLPSKVDVALECARLQHRLTLPPLEVEDFPQDVSLDTKIGILRSNPNEVDILQEFLSVATASQELINGSTSSYPEMWLGASTSSASYVNELSSLVEMGGVGTSNHHESARLQVEIADMEVFKDEKKRVENLRGVKLVNNDLGEIVVEGDESNPTEDIIAQYPIKVTADNSGEAGHRMTDPTDVGGIDTAPIFSQSQPDDFAAGFDDVNPNASFDLYEKVDVNHRLFVSRVAAAKTFFHRIEPSKKVSFHSNPAATAVSKATEKFHFPVTTKVSGRVSIFSKFKALIRDKFLMMRPSHSYQRLGSKETTVNELLQIVSLLLAPKQINGCPTEQELVKKKAKEVMKPGWGREGSNKLWLPLSKGKGISSMFLSGKWTFLTSALAISTPAECDH

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 1.064556 0.385928

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0119966 RBH 0.0 0.0 0.916616
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g02800 RBH 0.0 0.0 0.241658
Nipponbare | IRGSP 1.0 | RAP-db Os03g0119966 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0018040 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0001610 RBH 0.104231 0.000000 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0001630 RBH 0.000000 3.165563 0.669721
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0001620 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0001660 RBH 1.274041 0.000000 2.020214
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0017800 RBH 1.682967 5.1787125 1.667639
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0001610 RBH 0.058228 0.194995 0.397414
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0017500 RBH 1.5309 1.84797 4.339428
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0001680 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0001700 RBH 0.0 1.225571 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0001650 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0001680 RBH 0.000000 0.407235 0.186782
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0001690 RBH 0.047897 0.562542 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G001690 RBH 0.063604 0.0 0.286475
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0001530 RBH 0.192798 7.205901 1.114483
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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