Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_12g0015130 OGI:12051290 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr12:19649477-19652191
Gene Symbol -
DNA seq

TCAAACACATTCAATGCTGGCAATGTGCTCGACGAAGGTCCGGCAATCTCCCTCCAGCTTCTCCACGAAGTCCTTCGGCATTTTTTGGGCGTACAAGTGCTCAAGTGACCTAAGATGTTTGATGCCCTCAGGCACTTCTTTCAGATTCCAAAGCTCACGAAGCTGCAGGTATGTTAAGCTTGCCATGGAATCTTCACTTATCTGAATTGAGCTCAAATTCCTGAGGTTCAATAGGTACAGCTGCTTGAGCTTTGGGAACCATCCAGAAGAGAACACCAAGGATTCCCCATCATATGCACACTGAAGGTTAAGGTAAACGAGGTTTACCATTTGACATAAGGAGCCTAGGGGATCTTGCACTAGCCCAGACCGGCACATGGTCAGTACCTTGAGCTTCTGAAAGCCATCAGACACCGGAAAAAGCATCCCTTCTGCCAACCTTCCAGTCAAGTACAACTTCTCTAGATTCCTCAGTGGTCTCAGCTTTTGCAAGCTAAGGAACTCGTTGTCACCACGAGTTGCAACTGCCAGTTTCGTAAGGATAGTCATCTTCTTGATGGAAACCCAGAGATCATCATTGTGGTTTTGTTGGACCCCGGTGATGCCCAAGCTCCTCAGCTGCGTAAGGTACCCAAGGTTTTGTGCCAAATCTTTGTTTGCTTTCACCTCTCTGAGAGTCTGCAGGTGCTTCAGGCTGCTGATATTAGCAGGAATTGATGTGCCATACAAGTCGTTACTCACAGACAGGTGCCGGAGCCTTGTGAGCATTGTGATCTCGCGTGGCAACTCCCTCACATAAGCAAACCTGAGATGCAACGTCTGCAGCTTTTTCAGACTCGCTACTGATTTCGGGATCTTCCTCACTCTAGTACGCGAGAAATCGAGATAGTGGAGATTGAACAAGCTGGTTATTGCGTCTGGAATGTCTTCAAGGAGGGAGTATCTGAGACACAGGACTCGCAACAGTCTGAAGTTTGACGAGGCCGTGTAGATCCATGGGATCGGCACATGTTTGTCGAAGAGCAAAAACGACCGCAGATGCTGTGAAGCTAGGCTTGGCTGGAAGACTTGGCCTCCAACATGCACTGACACACGTTTTGTTACGTCATCCCCAATGTCTGTCACGTCTGACTGGTTACAGACAAGAGCAAAACTCTCTCTTCTTGATATGGCAAGTGCCATTTCTCTCACAAGATCATGCACTTGGAATCTCTTTGGCCTTCCAAACTCATTCCTCTCAGTTACTTGAATCAACGATCGCTGAGTAAGTTCCTTGAGGTAGTCCTCGGCTACTTCCTCCAGTGTTGTCTCTGTTCCTCGATCTTCCACGAATCCTTCTGCCACCCACAATCTGATTATCCACTTCCGCCGGATTTGGTAATCTTCAGGAAATAAGCCACAGTACAGGAAACAATTCCTTAAGTGGCTTGGAAGATCATCTAAGCTCAACTTTAGTACATTGGAGACCCAGTTGAGCTCTGGGTTATTTGTTAGTTGCCAGTTAAGTTGGTAATAGAAGACCCTCCAGTCTTGTTCCTCCATTTCTCTGTAAGATAAAAGACTCCCTATAGCTACAATAGCCAGGGGCAAGCCTTGGCATCTCTCCAGAATTTTGTTTGCCCAGGGAACAAGACCTTCAGGAATTGTTGATATACCTTTGTTTTGCTTTGAGCATGCCTTTTTGCTGAACAGCTTCCAAGATTCTCTCTGTGGAAGAAGGCCAATTTTTATAGTGTGGTTTTCCCGAGCTAATGACGCAACTGTTTCTATACGAGTGGTGATGATGACTTTACTTCCAAACCTGTTCTTCACAAATGCTCGATCAAAGAATAACCAAGAATCTCTATTCCACATGTCATCCAGAACAATAAGGTATCTCTTGTCCCTGAGGTTACTATTAACCTTATCCATCAAATGTGTAGCATCAGTAGTGCCATCTGAGATACCAAGTTGCATCATGACCTTAGTCAATAGGTCTTCAATGTGGTAATTTGGTGATACTGTGACCCAGGCATAACAATCAAATTTCTTCCTTATTTCCTTCTTTCTGCATATGCTGCTAGCGAGAGTTGTTTTACCTGAACCTCCCATTCCCCATATGGATATAATTGTGCGATCCTCACCAACACCATCTTCAGTTATGAAATGTGTCAACTTCTGCACTTCAGCTTCATTACCTATGATTGCCTCATCGTCTTCATCACTTAGGTAGGAAGAATCAGACAGGTAAACCTGACGAGTAATACTATTGCTCGATGATCCACCACCAAGTTCAGCTACCTTGATGCCATATCTCTTTTTCATAGTTGTTAGATGCTGGATACGTGCCTTTACTTGATTAAGCTGTGCTGAAATATCCTTCCAAGATGTGACGTTTTTCGAATGGTAGAATGTTTTCTTCATGAAGTTTTCTGAATCGTCCATTTTTCCAACAAGAAATGCATATTCGTCGATGATATCCTCAACTTCAGAGGCAATCTTTCTTACGTGCTTCAGCCAAGACTTGAGAATTTTGTCATTTTCACTGTATGGATCCACTTGACTTATGAAGGCTTGCATTACTTCAAATTCACTCTCAATTTCTTTCATGCTGTTCTCTGCTTCAAGAAAAATACCAGCTTCTTTCCCTAGCTTCGACTTGATTGCATTCAGTGCAGCTCCTCCTAAGGTAGCTGTAATTTTCTGAAGCACAACTAGTATCAAACCTTCTGCCAT

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CDS seq

ATGGCAGAAGGTTTGATACTAGTTGTGCTTCAGAAAATTACAGCTACCTTAGGAGGAGCTGCACTGAATGCAATCAAGTCGAAGCTAGGGAAAGAAGCTGGTATTTTTCTTGAAGCAGAGAACAGCATGAAAGAAATTGAGAGTGAATTTGAAGTAATGCAAGCCTTCATAAGTCAAGTGGATCCATACAGTGAAAATGACAAAATTCTCAAGTCTTGGCTGAAGCACGTAAGAAAGATTGCCTCTGAAGTTGAGGATATCATCGACGAATATGCATTTCTTGTTGGAAAAATGGACGATTCAGAAAACTTCATGAAGAAAACATTCTACCATTCGAAAAACGTCACATCTTGGAAGGATATTTCAGCACAGCTTAATCAAGTAAAGGCACGTATCCAGCATCTAACAACTATGAAAAAGAGATATGGCATCAAGGTAGCTGAACTTGGTGGTGGATCATCGAGCAATAGTATTACTCGTCAGGTTTACCTGTCTGATTCTTCCTACCTAAGTGATGAAGACGATGAGGCAATCATAGGTAATGAAGCTGAAGTGCAGAAGTTGACACATTTCATAACTGAAGATGGTGTTGGTGAGGATCGCACAATTATATCCATATGGGGAATGGGAGGTTCAGGTAAAACAACTCTCGCTAGCAGCATATGCAGAAAGAAGGAAATAAGGAAGAAATTTGATTGTTATGCCTGGGTCACAGTATCACCAAATTACCACATTGAAGACCTATTGACTAAGGTCATGATGCAACTTGGTATCTCAGATGGCACTACTGATGCTACACATTTGATGGATAAGGTTAATAGTAACCTCAGGGACAAGAGATACCTTATTGTTCTGGATGACATGTGGAATAGAGATTCTTGGTTATTCTTTGATCGAGCATTTGTGAAGAACAGGTTTGGAAGTAAAGTCATCATCACCACTCGTATAGAAACAGTTGCGTCATTAGCTCGGGAAAACCACACTATAAAAATTGGCCTTCTTCCACAGAGAGAATCTTGGAAGCTGTTCAGCAAAAAGGCATGCTCAAAGCAAAACAAAGGTATATCAACAATTCCTGAAGGTCTTGTTCCCTGGGCAAACAAAATTCTGGAGAGATGCCAAGGCTTGCCCCTGGCTATTGTAGCTATAGGGAGTCTTTTATCTTACAGAGAAATGGAGGAACAAGACTGGAGGGTCTTCTATTACCAACTTAACTGGCAACTAACAAATAACCCAGAGCTCAACTGGGTCTCCAATGTACTAAAGTTGAGCTTAGATGATCTTCCAAGCCACTTAAGGAATTGTTTCCTGTACTGTGGCTTATTTCCTGAAGATTACCAAATCCGGCGGAAGTGGATAATCAGATTGTGGGTGGCAGAAGGATTCGTGGAAGATCGAGGAACAGAGACAACACTGGAGGAAGTAGCCGAGGACTACCTCAAGGAACTTACTCAGCGATCGTTGATTCAAGTAACTGAGAGGAATGAGTTTGGAAGGCCAAAGAGATTCCAAGTGCATGATCTTGTGAGAGAAATGGCACTTGCCATATCAAGAAGAGAGAGTTTTGCTCTTGTCTGTAACCAGTCAGACGTGACAGACATTGGGGATGACGTAACAAAACGTGTGTCAGTGCATGTTGGAGGCCAAGTCTTCCAGCCAAGCCTAGCTTCACAGCATCTGCGGTCGTTTTTGCTCTTCGACAAACATGTGCCGATCCCATGGATCTACACGGCCTCGTCAAACTTCAGACTGTTGCGAGTCCTGTGTCTCAGATACTCCCTCCTTGAAGACATTCCAGACGCAATAACCAGCTTGTTCAATCTCCACTATCTCGATTTCTCGCGTACTAGAGTGAGGAAGATCCCGAAATCAGTAGCGAGTCTGAAAAAGCTGCAGACGTTGCATCTCAGGTTTGCTTATGTGAGGGAGTTGCCACGCGAGATCACAATGCTCACAAGGCTCCGGCACCTGTCTGTGAGTAACGACTTGTATGGCACATCAATTCCTGCTAATATCAGCAGCCTGAAGCACCTGCAGACTCTCAGAGAGGTGAAAGCAAACAAAGATTTGGCACAAAACCTTGGGTACCTTACGCAGCTGAGGAGCTTGGGCATCACCGGGGTCCAACAAAACCACAATGATGATCTCTGGGTTTCCATCAAGAAGATGACTATCCTTACGAAACTGGCAGTTGCAACTCGTGGTGACAACGAGTTCCTTAGCTTGCAAAAGCTGAGACCACTGAGGAATCTAGAGAAGTTGTACTTGACTGGAAGGTTGGCAGAAGGGATGCTTTTTCCGGTGTCTGATGGCTTTCAGAAGCTCAAGGTACTGACCATGTGCCGGTCTGGGCTAGTGCAAGATCCCCTAGGCTCCTTATGTCAAATGGTAAACCTCGTTTACCTTAACCTTCAGTGTGCATATGATGGGGAATCCTTGGTGTTCTCTTCTGGATGGTTCCCAAAGCTCAAGCAGCTGTACCTATTGAACCTCAGGAATTTGAGCTCAATTCAGATAAGTGAAGATTCCATGGCAAGCTTAACATACCTGCAGCTTCGTGAGCTTTGGAATCTGAAAGAAGTGCCTGAGGGCATCAAACATCTTAGGTCACTTGAGCACTTGTACGCCCAAAAAATGCCGAAGGACTTCGTGGAGAAGCTGGAGGGAGATTGCCGGACCTTCGTCGAGCACATTGCCAGCATTGAATGTGTTTGA

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Protein seq

MAEGLILVVLQKITATLGGAALNAIKSKLGKEAGIFLEAENSMKEIESEFEVMQAFISQVDPYSENDKILKSWLKHVRKIASEVEDIIDEYAFLVGKMDDSENFMKKTFYHSKNVTSWKDISAQLNQVKARIQHLTTMKKRYGIKVAELGGGSSSNSITRQVYLSDSSYLSDEDDEAIIGNEAEVQKLTHFITEDGVGEDRTIISIWGMGGSGKTTLASSICRKKEIRKKFDCYAWVTVSPNYHIEDLLTKVMMQLGISDGTTDATHLMDKVNSNLRDKRYLIVLDDMWNRDSWLFFDRAFVKNRFGSKVIITTRIETVASLARENHTIKIGLLPQRESWKLFSKKACSKQNKGISTIPEGLVPWANKILERCQGLPLAIVAIGSLLSYREMEEQDWRVFYYQLNWQLTNNPELNWVSNVLKLSLDDLPSHLRNCFLYCGLFPEDYQIRRKWIIRLWVAEGFVEDRGTETTLEEVAEDYLKELTQRSLIQVTERNEFGRPKRFQVHDLVREMALAISRRESFALVCNQSDVTDIGDDVTKRVSVHVGGQVFQPSLASQHLRSFLLFDKHVPIPWIYTASSNFRLLRVLCLRYSLLEDIPDAITSLFNLHYLDFSRTRVRKIPKSVASLKKLQTLHLRFAYVRELPREITMLTRLRHLSVSNDLYGTSIPANISSLKHLQTLREVKANKDLAQNLGYLTQLRSLGITGVQQNHNDDLWVSIKKMTILTKLAVATRGDNEFLSLQKLRPLRNLEKLYLTGRLAEGMLFPVSDGFQKLKVLTMCRSGLVQDPLGSLCQMVNLVYLNLQCAYDGESLVFSSGWFPKLKQLYLLNLRNLSSIQISEDSMASLTYLQLRELWNLKEVPEGIKHLRSLEHLYAQKMPKDFVEKLEGDCRTFVEHIASIECV

Function Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_12g0015130 OsARC_12g0015130.01 Chr12 19649477 19652191 - NAM
CDS seq

ATGGCAGAAGGTTTGATACTAGTTGTGCTTCAGAAAATTACAGCTACCTTAGGAGGAGCTGCACTGAATGCAATCAAGTCGAAGCTAGGGAAAGAAGCTGGTATTTTTCTTGAAGCAGAGAACAGCATGAAAGAAATTGAGAGTGAATTTGAAGTAATGCAAGCCTTCATAAGTCAAGTGGATCCATACAGTGAAAATGACAAAATTCTCAAGTCTTGGCTGAAGCACGTAAGAAAGATTGCCTCTGAAGTTGAGGATATCATCGACGAATATGCATTTCTTGTTGGAAAAATGGACGATTCAGAAAACTTCATGAAGAAAACATTCTACCATTCGAAAAACGTCACATCTTGGAAGGATATTTCAGCACAGCTTAATCAAGTAAAGGCACGTATCCAGCATCTAACAACTATGAAAAAGAGATATGGCATCAAGGTAGCTGAACTTGGTGGTGGATCATCGAGCAATAGTATTACTCGTCAGGTTTACCTGTCTGATTCTTCCTACCTAAGTGATGAAGACGATGAGGCAATCATAGGTAATGAAGCTGAAGTGCAGAAGTTGACACATTTCATAACTGAAGATGGTGTTGGTGAGGATCGCACAATTATATCCATATGGGGAATGGGAGGTTCAGGTAAAACAACTCTCGCTAGCAGCATATGCAGAAAGAAGGAAATAAGGAAGAAATTTGATTGTTATGCCTGGGTCACAGTATCACCAAATTACCACATTGAAGACCTATTGACTAAGGTCATGATGCAACTTGGTATCTCAGATGGCACTACTGATGCTACACATTTGATGGATAAGGTTAATAGTAACCTCAGGGACAAGAGATACCTTATTGTTCTGGATGACATGTGGAATAGAGATTCTTGGTTATTCTTTGATCGAGCATTTGTGAAGAACAGGTTTGGAAGTAAAGTCATCATCACCACTCGTATAGAAACAGTTGCGTCATTAGCTCGGGAAAACCACACTATAAAAATTGGCCTTCTTCCACAGAGAGAATCTTGGAAGCTGTTCAGCAAAAAGGCATGCTCAAAGCAAAACAAAGGTATATCAACAATTCCTGAAGGTCTTGTTCCCTGGGCAAACAAAATTCTGGAGAGATGCCAAGGCTTGCCCCTGGCTATTGTAGCTATAGGGAGTCTTTTATCTTACAGAGAAATGGAGGAACAAGACTGGAGGGTCTTCTATTACCAACTTAACTGGCAACTAACAAATAACCCAGAGCTCAACTGGGTCTCCAATGTACTAAAGTTGAGCTTAGATGATCTTCCAAGCCACTTAAGGAATTGTTTCCTGTACTGTGGCTTATTTCCTGAAGATTACCAAATCCGGCGGAAGTGGATAATCAGATTGTGGGTGGCAGAAGGATTCGTGGAAGATCGAGGAACAGAGACAACACTGGAGGAAGTAGCCGAGGACTACCTCAAGGAACTTACTCAGCGATCGTTGATTCAAGTAACTGAGAGGAATGAGTTTGGAAGGCCAAAGAGATTCCAAGTGCATGATCTTGTGAGAGAAATGGCACTTGCCATATCAAGAAGAGAGAGTTTTGCTCTTGTCTGTAACCAGTCAGACGTGACAGACATTGGGGATGACGTAACAAAACGTGTGTCAGTGCATGTTGGAGGCCAAGTCTTCCAGCCAAGCCTAGCTTCACAGCATCTGCGGTCGTTTTTGCTCTTCGACAAACATGTGCCGATCCCATGGATCTACACGGCCTCGTCAAACTTCAGACTGTTGCGAGTCCTGTGTCTCAGATACTCCCTCCTTGAAGACATTCCAGACGCAATAACCAGCTTGTTCAATCTCCACTATCTCGATTTCTCGCGTACTAGAGTGAGGAAGATCCCGAAATCAGTAGCGAGTCTGAAAAAGCTGCAGACGTTGCATCTCAGGTTTGCTTATGTGAGGGAGTTGCCACGCGAGATCACAATGCTCACAAGGCTCCGGCACCTGTCTGTGAGTAACGACTTGTATGGCACATCAATTCCTGCTAATATCAGCAGCCTGAAGCACCTGCAGACTCTCAGAGAGGTGAAAGCAAACAAAGATTTGGCACAAAACCTTGGGTACCTTACGCAGCTGAGGAGCTTGGGCATCACCGGGGTCCAACAAAACCACAATGATGATCTCTGGGTTTCCATCAAGAAGATGACTATCCTTACGAAACTGGCAGTTGCAACTCGTGGTGACAACGAGTTCCTTAGCTTGCAAAAGCTGAGACCACTGAGGAATCTAGAGAAGTTGTACTTGACTGGAAGGTTGGCAGAAGGGATGCTTTTTCCGGTGTCTGATGGCTTTCAGAAGCTCAAGGTACTGACCATGTGCCGGTCTGGGCTAGTGCAAGATCCCCTAGGCTCCTTATGTCAAATGGTAAACCTCGTTTACCTTAACCTTCAGTGTGCATATGATGGGGAATCCTTGGTGTTCTCTTCTGGATGGTTCCCAAAGCTCAAGCAGCTGTACCTATTGAACCTCAGGAATTTGAGCTCAATTCAGATAAGTGAAGATTCCATGGCAAGCTTAACATACCTGCAGCTTCGTGAGCTTTGGAATCTGAAAGAAGTGCCTGAGGGCATCAAACATCTTAGGTCACTTGAGCACTTGTACGCCCAAAAAATGCCGAAGGACTTCGTGGAGAAGCTGGAGGGAGATTGCCGGACCTTCGTCGAGCACATTGCCAGCATTGAATGTGTTTGA

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Protein seq

MAEGLILVVLQKITATLGGAALNAIKSKLGKEAGIFLEAENSMKEIESEFEVMQAFISQVDPYSENDKILKSWLKHVRKIASEVEDIIDEYAFLVGKMDDSENFMKKTFYHSKNVTSWKDISAQLNQVKARIQHLTTMKKRYGIKVAELGGGSSSNSITRQVYLSDSSYLSDEDDEAIIGNEAEVQKLTHFITEDGVGEDRTIISIWGMGGSGKTTLASSICRKKEIRKKFDCYAWVTVSPNYHIEDLLTKVMMQLGISDGTTDATHLMDKVNSNLRDKRYLIVLDDMWNRDSWLFFDRAFVKNRFGSKVIITTRIETVASLARENHTIKIGLLPQRESWKLFSKKACSKQNKGISTIPEGLVPWANKILERCQGLPLAIVAIGSLLSYREMEEQDWRVFYYQLNWQLTNNPELNWVSNVLKLSLDDLPSHLRNCFLYCGLFPEDYQIRRKWIIRLWVAEGFVEDRGTETTLEEVAEDYLKELTQRSLIQVTERNEFGRPKRFQVHDLVREMALAISRRESFALVCNQSDVTDIGDDVTKRVSVHVGGQVFQPSLASQHLRSFLLFDKHVPIPWIYTASSNFRLLRVLCLRYSLLEDIPDAITSLFNLHYLDFSRTRVRKIPKSVASLKKLQTLHLRFAYVRELPREITMLTRLRHLSVSNDLYGTSIPANISSLKHLQTLREVKANKDLAQNLGYLTQLRSLGITGVQQNHNDDLWVSIKKMTILTKLAVATRGDNEFLSLQKLRPLRNLEKLYLTGRLAEGMLFPVSDGFQKLKVLTMCRSGLVQDPLGSLCQMVNLVYLNLQCAYDGESLVFSSGWFPKLKQLYLLNLRNLSSIQISEDSMASLTYLQLRELWNLKEVPEGIKHLRSLEHLYAQKMPKDFVEKLEGDCRTFVEHIASIECV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.021726 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0500500 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g31620 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os12g0500500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0015280 RBH 0.176322 3.494877 0.461000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0015420 RBH 0.047317 1.110912 0.356812
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0014200 SBH 0.320572 2.539342 1.735354
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0013630 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0257300 SBH 0.004694 3.4090505 0.0447675
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0014830 RBH 0.0 0.323757 0.113335
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0300700 SBH 10.2455155 11.7344715 12.761187
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0015020 RBH 0.061027 0.044458 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0015220 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0014070 SBH 0.0 4.838511 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0015070 RBH 0.297868 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0015230 RBH 0.043487 2.552025 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G014000 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0013810 SBH 0.0 1.865107 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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