Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_12g0010970 | OGI:12036400 | 15/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr12:12955549-12955833 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGCAACTCCATCGCCGAGAACACACGCCCACGCTGCCCCTGCCACCGAAGCCGTTCGCCACCGCCATGTTGCCTTCGGGGTTGCACATGTTGCTACTCTCCAAGCTCGGGAACGCCATGAACTCCGGCGACTGCAGGGCGCGGCCGTGGTGATGCGGGAACGCCAGGTTGGGGTCCTGCGCACCCTTGTGCATCAGCTTCAGGTTCTTAGCCGCCAGTCCCACGGGGACCGAGCCAGGCACCGTTGCGGAGGTGGAGGCCGACGTGGCCGCTGTCGACACCAT |
||||||||||
| CDS seq | ATGGTGTCGACAGCGGCCACGTCGGCCTCCACCTCCGCAACGGTGCCTGGCTCGGTCCCCGTGGGACTGGCGGCTAAGAACCTGAAGCTGATGCACAAGGGTGCGCAGGACCCCAACCTGGCGTTCCCGCATCACCACGGCCGCGCCCTGCAGTCGCCGGAGTTCATGGCGTTCCCGAGCTTGGAGAGTAGCAACATGTGCAACCCCGAAGGCAACATGGCGGTGGCGAACGGCTTCGGTGGCAGGGGCAGCGTGGGCGTGTGTTCTCGGCGATGGAGTTGCTGA |
||||||||||
| Protein seq | MVSTAATSASTSATVPGSVPVGLAAKNLKLMHKGAQDPNLAFPHHHGRALQSPEFMAFPSLESSNMCNPEGNMAVANGFGGRGSVGVCSRRWSC |
||||||||||
| Function | Dof zinc finger protein 2 [UniProtKB/Swiss-Prot:B9F1L8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_12g0010970 | OsARC_12g0010970.01 | Chr12 | 12955549 | 12955833 | - | NAM | ||
| CDS seq | ATGGTGTCGACAGCGGCCACGTCGGCCTCCACCTCCGCAACGGTGCCTGGCTCGGTCCCCGTGGGACTGGCGGCTAAGAACCTGAAGCTGATGCACAAGGGTGCGCAGGACCCCAACCTGGCGTTCCCGCATCACCACGGCCGCGCCCTGCAGTCGCCGGAGTTCATGGCGTTCCCGAGCTTGGAGAGTAGCAACATGTGCAACCCCGAAGGCAACATGGCGGTGGCGAACGGCTTCGGTGGCAGGGGCAGCGTGGGCGTGTGTTCTCGGCGATGGAGTTGCTGA
More
|
|||||||
| Protein seq | MVSTAATSASTSATVPGSVPVGLAAKNLKLMHKGAQDPNLAFPHHHGRALQSPEFMAFPSLESSNMCNPEGNMAVANGFGGRGSVGVCSRRWSC |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0011010 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0011210 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0011160 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0010710 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0184300 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0010920 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0207900 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0010770 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0011120 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0011020 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0010950 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0011100 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G010880 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0010660 | RBH | 0.0 | 0.0 | 0.0 |
