Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsARC_12g0002130 | OGI:12004510 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr12:1492393-1498694 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TTAACATAATGTAGAAATTCTTACCTCTATGGTCTTGATAATGTCATTGGGATCGATTTGTACACCATGAACAGTAGTTGTCGTTGAAGCCAACAATATGCTTTGCTGCAAAGAATGCAAGAAGAGACATCATTCTCTAGGAGTCGATCTTCAGGACAGTCGAGGATCATACCGTTGGCAAACAAGATAATATGGAGGCTTTATATAGAGGTGTTTGTGGTGCATCGATAAGATAATTATGTATTAATCCATTGCTATCATTTTTACATTACTACACGGAAATAAGGAAAGGAGGAATAATGCTTCCTTGTATTCTGTAAAATTCATGATTGATTAATTAAATACCATAAGTAGGTCTGCTGGTAAAATTCAAATTTCGAATGCAAGTGTACTAACCATATTTTGGTGGAGAAAGTCCATTTTTCTCCCTCAACTATAGGGCGGTTTTGGGTCGTGTCCATCAATCCTAAAATCAGGTATAAAGACCCCCTCAATCGTTAAAACCAGATCAATTTAACTCCCTAGGCGATGCTAATGGTGAGGTTTCCTCCTCTGTGGTGTTGAGTTTATATGACGTGGCACTTACCTACCATTCCAATAATAAAATAAAATAAAATGTTAAAAATAGGCAGGACCCAATGTAAGTCTCCTGGAAAAAAAATGGGATCCTCCCCTCTTATCTCCCTCCTACTCCTCTCTCTCACCCTGCGAGTATAGAGAGAGATTGCCACCGCCACTCCACTACAAGTGTACTCCTCCGTTGCAAAAAAAAAACTAAACATAGGAGGGGATGTGACATTTTCTAATACATCGAATCTGGACAAAGGGCTATCCAGATTCATTGTATTAGAAGATGTCACATGCTTGCCTAGGTTGTGTTTTTTGGGACGGAGGGAGTACACAAGCGTATAGGGGAGGGCCGCCATGGATCATCTCCGAGTGGTACATGGCCCCGTGTTTTATGCTACTGCTAGGAGCATGCCTCCTAGGGTGTAACCTCCGCCACCTGGAAGCCAACCCTAGCTCGCCAACCGTCACCAGAGGCATGCCACCGAATCATGCTGGCAGTTGGAACGGAGAGGGCCAAGGAGGGTTGGCTCACTTCGGAGGAAGAGTCACTCGAGTTCGACGTGGTGATGGCAAGCGTGGGGCTCGAGCTCGAGCGAGATGTTGCCAAGGACTTAAGGCTCGGGGAGCTGAGGCACCTTGCCATGATGTCGATGGTGCAACTCGACACAAGGAGTAGCGCGGGGACAGAGCAACTGCTTGGAGGTGGCCATCGAGTCAAGGGAGTATAGTATGGTGTCCAGTTCCCACTGGCACCTCTATCACCTTCTCCTCAATCACATCCAAAGATGTCGTCGTTGTCCTGGTTAACCACCGTTTGAGCTCAACTACCAAACCGAACCCCATCACTTCCCTATCTTTGAGAAGATGCCACCACCACACAGGCTGCCTTCACAGTTTGGCGAGGGAACCGAGAGAAAAAAGAGTGGGAAGGGAGGAGAGATGTAGTCACTTACATGTGGACCCTATATTTATTTTGTTAATTTCTTTGATCAACAAAAAGCCACCATAGTTGAGGGAGTCATTTTGCATCAGCTTTAGGCCATCTTTGTTTAGGCTTAGGCTTATTGGCTTAGACTTTTAAGTCAGCTTATTGGCTTATATGATTTATAAGCCAGTGAATTTAATGTCCTAAGTTTAGTGGTGAAGTCATACATCTATCTTATATAAGCAAAAAAAAGCTTCTCCAACCTAGCTTTTGGCTTAATAGTGTAAGAGTGGCTTATAGCTTTAAAAAAGCCAAACGAAAAAGCTGTTTGTTTGTTTAGGCTTAAACTTTTTGGCTTATAAGCCAAAAAGAGGACCATACTCTCGAGCTACTAGCCCTACCTACCTTGCAAATGTATGAGCTAGTTCATCGACCTCGCGTCGTCATAGGATCTCGCCACGAAGAAGAAGGACCCTCTAACCGGATGTAATCATACATGACGCCGAAGAAGGGGCTCAACGCCCTCGTCTGCGTGATGAACACCACATTCTCCTCCTCTCCCTCCACCAGCATGTACCCCTTGATCGCGAACTCCAAGCTCCACTGCACGCCGTGTGCCCCGTGCCGCGCTATCGCGTTCCCGTCGCCGAACGCCGCCGCCGTCGTCAACGCCTCGTCCGCCCGGCCGTTCACCACCACCTGCACCCTCGCCATCTGCGCCGCCGCCAGCTCGACGCGGAGCGTGTAGGTGGCGTCCGCCACGACGCGCTCCAGCCTGAACCGGATCTGCCTCGTCGTCGCCGCATACCCGTCGCCTTGCTTTCTGCACAACAAGGAAAGAAAACACAATTGGTTATCTTGATGATTCTTCAGAGGTTAATCGATCGAGAGGAAATTGATTGATTGATTGATTGTTTTGTTCGTTGTTGTTTAATTACCTTGTGACGTGTGCGAAGAACCAGTCCTTGGAGATGTCGCTCTCGCCGATCGTGAAGACGAGATCGCCGTCAGGGTATAGCTCAGCGTACCTCTCCCACAACCCGTACTGCCTGTACTTGTCTTTGGTGATGAAGATCTTGTTCAGGTATTTGGGGTTGGGATCAGGGATGAAGAACTCTGCTGCACTCCTGTCAGGAACACCCATCTCCCACAGTGTCGGGCCTGATCTTGGAGGCTCGAACACAAGATCACCGAGGTTGATGCCACGTCCTGCTTAAATTCAGACAAACAATGGTAGTTAAACAGAGTTGTTCTGATCCAGATTATCATGTTAAATACTCCCTCCGTTTCTAAATGTTTGACACCGTTGACTTTTTAGCACATATTTGATAATTCGTTTTATTAAAAAATTTTATAAAATATGTAAAACTATATGTATACATGAAAGTATATTCAACAATAAATCAAATGATAGGAAAATAATTAATAATTACTTTTTTTAATAAGACGAATGGTCAAACATGTTTAAAAAGTTAACGACGTCAAATATTTAGAACGGAGGGAGTAATACCAAATGCCATCTGAATTAGTGCTAACTTAACCTGGTGTTACTGTTACTTGCGAGGTGTACATGTAGTCCCCAAGAAACCCAGGAACCCATGCGTAGAGGTTGTACACTCCTGCTCTCACATTACTGATGCTGAAGCTGCCGCAGGGCGTTGCCCTCGTCCAGAATTGGTAGTTTTTGCTCTCTGTCACCCAAGAACCGGGTTGTCCAGGAGTGGCCAAGCCAACAAAAGCCATCCCAGCTGCCATGTCCTTACTGCTCATGTACCTGAAATAAAATAATAATTAACATCAAAACAAACACATTATCAACGTTTCAGAGATGATGATCCATGAACAATCTTGACCCATGAAATGCAAGTCATCATGTACCTGTGTGGAGTTGAAACTATGAAAGTAATGAATCTTACCTGTCTCTGACAAATAGCCTCCCGGTGACTGATCCTCTCTGACTTGCCTTGTGGAAGTCAGGGGATACAGGGAAGCTGTATGGCCATTTCCTAGCTTCAGCTTCTGCCTGCAACTTGGCATCCACCCAAAGCGAATGCAGATCTCCTCTCCTCGGATTGGAGTTGAGGTAGATGAACACCGGGCCCATCACCTTCTTCCAGTACTCCCCCTCCTCAATCTTCAGAACAATGTCATTCCCGACGTAATGCGTGCCAAGAAACATCTGACACGAACCAAAATTTCAGTTTTCTCTCTGTACCAAGATTCCAAGTGCAGAGTTCGTTATTAGGAATAGTAATTGTTTTTTTTTTTTTGCGGGGAGGAATAGTAATTAGTTGTAGGGTGAACTGATTGATCTTACTGTCAGAGAGGTCGGGCCGACATGGGAGGTGAGCTCTCGCTTGAGAGGGCCGCCGCTCTTGAACTCGTTGCTGGGGGTGATCACCCAGAATCCCATGGGGTTAGGGTGATTGCTGCTAATCCATCCATGAACTCTGTTGTCCTTGTTGTCCAGCGAGTACTCGTACTTGTCATCCACCTAGTACATCACAAATTCAGAAAATCACCAGATGCATACATCAAACAGTCGATTAAAAGATGACAGCCTGATTAATTTGGCGTGCAAGATGTTTCAGAATTCGGTTAGTTAATTACCTCTCCTCTGAACTGTGGTTCCTTGGGATCAACGAGCAGGACAGCCTCCTTGTATGCCAATGGAGCACCGCGAGGTGCATCTCTGTCTGTCGCACTCGGCATAAACCTCTGTATATCGTCTGAGATCGCCATGTAGTTGAACCTGACAAAACGTTCATGAACACATGTTTTCAAGATTAGACTGCAGATCAAGCAAATATTGAATGTCTTCAGAGAACAATTTTTGAGAAGGAATACTCACTTGTCCGTGTTCAGTTTGAAGGCGAGGCGAGCCTCTGAAATGTTGAGAGCAGGCCAGTCCCTGACATGCTCAAAGATGGCATAGCAGTAGAATCCTGAGCTACCTTTCAGCATCACAAGCCTGCACAAATTTTAGAGCAGCAATCGTAAAATGGCAGTGATATTTGTATACTACCACTATATGGCAGGATAAATTATAGCCAAATTTATTAATATAGGTCCGAAAATTCTAAAGGAGTACCTCTTGTCGATGTTTAGCCTGACACTATTTGGACGTGATGGATTGTAGGTGCTCCTGAAGGAAAGCTCCACTTGATCTTCACTTGAGGATACTACCTTGAATTCAGTACTATCCAGCCTGTGAAAATTCAGTCATTTAGTTCATCCTTTTTGAGAGAAAAGCATAATTCGTTCAGCTGTAGCCCGTAATAAGGTGCAGTGCATACTATTTTACATTACTGTGAAATTATGTTTTCCAGAAAGAAAATCATTTGAGCTCTTGTACATATCCTCTGTTTATTAGGCAGTAATTTCTGACGGTGTTTAACACCGTTTGCTTATCAGAAAAGAACTGAAGTCACAGTTACAGGTTGCTCTTGGTACTATTGCTATTAGGAGGCATCTTTCGGTGCAGAGTGATGAACTGCAAAGGCTTGCTCATATTTTACTCACAACAAGAGCTTGTTTGTTATCTGGCCTGAAGGCAAGTTCTTCAATCCATATGAATATGGGTGGTTCAAAAGAAATAATATTGATTACAATTAACAGGCTGGTAGCTATATGTTCAAGTGGTGTTAAATCGAACTAGTACTGTTATATTGTGGTTATTGGGTAGGTTGATCTTGTTAATTATGTTATGAGCTGTAACAGATCAAGGCAATAAAACAAGAACACTATTAACTACAGCAAGCTAGGCAAGTACCTGCTCACTGGCTGGTAGTGACTTTCAGATTATGTACCTACTTCAGTTGTTCAGTTAGAACGAGAGTATTAGTTTATCCAACTTTCTAACTGACATTTATTTTGCACATTCCAAGTAGAAAAGTGGTATAAATTAGAAATAAATTGAGATTGAACAGTAGTCAGATCATATATACAAATGTGGAATAAGAACACACGCAAAGATGATGATTTTGGATGACTCTAATTAAAGTAGCATATGGATGCATCCTTTTCAGTTTAGAACAAAAAATGAATTGAGGACCTTAAACACAGGAAAGATCAAAGCGCATGCATATATACCAAGCAAAGTATAGTTAGCAGGCGATATATAAATGACTTAATTTACAATAAAGTTAAGAAGTAATGACGTACATATCGATCATGCCTCTTGGATTATTGGATCCGGGGAAATTCCATACCACATCCCAGTACCTGCAGACAGACCAAGATCAAATTAATTATATATGGTTAGATGTAACTGGTATGTAACATAAAGATGGCTTTTCATCTATCAAGGGAATATCATCTTTTTTTTTACATGTGTCATCTAAGATAATCACAAAAAAAAATTAAAAATATGATAACATAGATTAATATAAAATATATAATTTCACAAATATGTAAGGCTAAATTCAACTTTTACAAGTTGCAATAGAAACAACAAATTTAACTGAAAATAGTTATCGTACCATAATAATTATATTTGTTATTTTTTTATAACATGTAGAAGTTGAATTTGAACTTTTTGAGAAAAAAATTAAAAAAAGACAGGCAGGTATGTACTAAGTATGTTTTGAGAAATTGAAAGAACTGAGTAATTAGTTAAAGAGCAAGAAAACTATATATAGTAGTTACACCGATGGAGAGATGGATGGAGTGTAATATACCCTGCGGAGTTGGGTTGTCCGTCGAAGCGGAGCAGGTTGCGTTCGCCGTTGTATCGGACGCCGGTGATGTGGCCCCCAGGTTTTGACAGCGACACCTGCACGATGCCATTGTCCACCATCACCTGCAT
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CDS seq | ATGCAGGTGATGGTGGACAATGGCATCGTGCAGGTGTCGCTGTCAAAACCTGGGGGCCACATCACCGGCGTCCGATACAACGGCGAACGCAACCTGCTCCGCTTCGACGGACAACCCAACTCCGCAGGGCTGGATAGTACTGAATTCAAGGTAGTATCCTCAAGTGAAGATCAAGTGGAGCTTTCCTTCAGGAGCACCTACAATCCATCACGTCCAAATAGTGTCAGGCTAAACATCGACAAGAGGCTTGTGATGCTGAAAGGTAGCTCAGGATTCTACTGCTATGCCATCTTTGAGCATGTCAGGGACTGGCCTGCTCTCAACATTTCAGAGGCTCGCCTCGCCTTCAAACTGAACACGGACAATCTAATCTTGAAAACATGTGTTCATGAACGTTTTGTCAGGTTCAACTACATGGCGATCTCAGACGATATACAGAGGTTTATGCCGAGTGCGACAGACAGAGATGCACCTCGCGGTGCTCCATTGGCATACAAGGAGGCTGTCCTGCTCGTTGATCCCAAGGAACCACAGTTCAGAGGAGAGGTGGATGACAAGTACGAGTACTCGCTGGACAACAAGGACAACAGAGTTCATGGATGGATTAGCAGCAATCACCCTAACCCCATGGGATTCTGGGTGATCACCCCCAGCAACGAGTTCAAGAGCGGCGGCCCTCTCAAGCGAGAGCTCACCTCCCATGTCGGCCCGACCTCTCTGACAATGTTTCTTGGCACGCATTACGTCGGGAATGACATTGTTCTGAAGATTGAGGAGGGGGAGTACTGGAAGAAGGTGATGGGCCCGGTGTTCATCTACCTCAACTCCAATCCGAGGAGAGGAGATCTGCATTCGCTTTGGGTGGATGCCAAGTTGCAGGCAGAAGCTGAAGCTAGGAAATGGCCATACAGCTTCCCTGTATCCCCTGACTTCCACAAGGCAAGTCAGAGAGGATCAGTCACCGGGAGGCTATTTGTCAGAGACAGGTACATGAGCAGTAAGGACATGGCAGCTGGGATGGCTTTTGTTGGCTTGGCCACTCCTGGACAACCCGGTTCTTGGGTGACAGAGAGCAAAAACTACCAATTCTGGACGAGGGCAACGCCCTGCGGCAGCTTCAGCATCAGTAATGTGAGAGCAGGAGTGTACAACCTCTACGCATGGGTTCCTGGGTTTCTTGGGGACTACATATCAGGCCCGACACTGTGGGAGATGGGTGTTCCTGACAGGAGTGCAGCAGAGTTCTTCATCCCTGATCCCAACCCCAAATACCTGAACAAGATCTTCATCACCAAAGACAAGTACAGGCAGTACGGGTTGTGGGAGAGGTACGCTGAGCTATACCCTGACGGCGATCTCGTCTTCACGATCGGCGAGAGCGACATCTCCAAGGACTGGTTCTTCGCACACGTCACAAGAAAGCAAGGCGACGGGTATGCGGCGACGACGAGGCAGATCCGGTTCAGGCTGGAGCGCGTCGTGGCGGACGCCACCTACACGCTCCGCGTCGAGCTGGCGGCGGCGCAGATGGCGAGGGTGCAGGTGGTGGTGAACGGCCGGGCGGACGAGGCGTTGACGACGGCGGCGGCGTTCGGCGACGGGAACGCGATAGCGCGGCACGGGGCACACGGCGTGCAGTGGAGCTTGGAGTTCGCGATCAAGGGGTACATGCTGGTGGAGGGAGAGGAGGAGAATGTGGTGTTCATCACGCAGACGAGGGCGTTGAGCCCCTTCTTCGGCGTCATGTATGATTACATCCGTTGCTCTGTCCCCGCGCTACTCCTTGTGTCGAGTTGCACCATCGACATCATGGCAAGGTGCCTCAGCTCCCCGAGCCTTAAGTCCTTGGCAACATCTCGCTCGAGCTCGAGCCCCACGCTTGCCATCACCACGTCGAACTCGAGTGACTCTTCCTCCGAAGTGAGCCAACCCTCCTTGGCCCTCTCCGTTCCAACTGCCAGCATGATTCGGTGGCATGCCTCTGGTGACGGTTGGCGAGCTAGGGTTGGCTTCCAGGTGGCGGAGCAAAGCATATTGTTGGCTTCAACGACAACTACTGTTCATGGTGTACAAATCGATCCCAATGACATTATCAAGACCATAGAGGTAAGAATTTCTACATTATGTTAA
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Protein seq | MQVMVDNGIVQVSLSKPGGHITGVRYNGERNLLRFDGQPNSAGLDSTEFKVVSSSEDQVELSFRSTYNPSRPNSVRLNIDKRLVMLKGSSGFYCYAIFEHVRDWPALNISEARLAFKLNTDNLILKTCVHERFVRFNYMAISDDIQRFMPSATDRDAPRGAPLAYKEAVLLVDPKEPQFRGEVDDKYEYSLDNKDNRVHGWISSNHPNPMGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFLGTHYVGNDIVLKIEEGEYWKKVMGPVFIYLNSNPRRGDLHSLWVDAKLQAEAEARKWPYSFPVSPDFHKASQRGSVTGRLFVRDRYMSSKDMAAGMAFVGLATPGQPGSWVTESKNYQFWTRATPCGSFSISNVRAGVYNLYAWVPGFLGDYISGPTLWEMGVPDRSAAEFFIPDPNPKYLNKIFITKDKYRQYGLWERYAELYPDGDLVFTIGESDISKDWFFAHVTRKQGDGYAATTRQIRFRLERVVADATYTLRVELAAAQMARVQVVVNGRADEALTTAAAFGDGNAIARHGAHGVQWSLEFAIKGYMLVEGEEENVVFITQTRALSPFFGVMYDYIRCSVPALLLVSSCTIDIMARCLSSPSLKSLATSRSSSSPTLAITTSNSSDSSSEVSQPSLALSVPTASMIRWHASGDGWRARVGFQVAEQSILLASTTTTVHGVQIDPNDIIKTIEVRISTLC |
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Function | Rhamnogalacturonate lyase [UniProtKB/Swiss-Prot:Q8RJP2] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsARC_12g0002130 | OsARC_12g0002130.01 | Chr12 | 1492393 | 1498694 | - | NAM | ||
CDS seq | ATGCAGGTGATGGTGGACAATGGCATCGTGCAGGTGTCGCTGTCAAAACCTGGGGGCCACATCACCGGCGTCCGATACAACGGCGAACGCAACCTGCTCCGCTTCGACGGACAACCCAACTCCGCAGGGCTGGATAGTACTGAATTCAAGGTAGTATCCTCAAGTGAAGATCAAGTGGAGCTTTCCTTCAGGAGCACCTACAATCCATCACGTCCAAATAGTGTCAGGCTAAACATCGACAAGAGGCTTGTGATGCTGAAAGGTAGCTCAGGATTCTACTGCTATGCCATCTTTGAGCATGTCAGGGACTGGCCTGCTCTCAACATTTCAGAGGCTCGCCTCGCCTTCAAACTGAACACGGACAATCTAATCTTGAAAACATGTGTTCATGAACGTTTTGTCAGGTTCAACTACATGGCGATCTCAGACGATATACAGAGGTTTATGCCGAGTGCGACAGACAGAGATGCACCTCGCGGTGCTCCATTGGCATACAAGGAGGCTGTCCTGCTCGTTGATCCCAAGGAACCACAGTTCAGAGGAGAGGTGGATGACAAGTACGAGTACTCGCTGGACAACAAGGACAACAGAGTTCATGGATGGATTAGCAGCAATCACCCTAACCCCATGGGATTCTGGGTGATCACCCCCAGCAACGAGTTCAAGAGCGGCGGCCCTCTCAAGCGAGAGCTCACCTCCCATGTCGGCCCGACCTCTCTGACAATGTTTCTTGGCACGCATTACGTCGGGAATGACATTGTTCTGAAGATTGAGGAGGGGGAGTACTGGAAGAAGGTGATGGGCCCGGTGTTCATCTACCTCAACTCCAATCCGAGGAGAGGAGATCTGCATTCGCTTTGGGTGGATGCCAAGTTGCAGGCAGAAGCTGAAGCTAGGAAATGGCCATACAGCTTCCCTGTATCCCCTGACTTCCACAAGGCAAGTCAGAGAGGATCAGTCACCGGGAGGCTATTTGTCAGAGACAGGTACATGAGCAGTAAGGACATGGCAGCTGGGATGGCTTTTGTTGGCTTGGCCACTCCTGGACAACCCGGTTCTTGGGTGACAGAGAGCAAAAACTACCAATTCTGGACGAGGGCAACGCCCTGCGGCAGCTTCAGCATCAGTAATGTGAGAGCAGGAGTGTACAACCTCTACGCATGGGTTCCTGGGTTTCTTGGGGACTACATATCAGGCCCGACACTGTGGGAGATGGGTGTTCCTGACAGGAGTGCAGCAGAGTTCTTCATCCCTGATCCCAACCCCAAATACCTGAACAAGATCTTCATCACCAAAGACAAGTACAGGCAGTACGGGTTGTGGGAGAGGTACGCTGAGCTATACCCTGACGGCGATCTCGTCTTCACGATCGGCGAGAGCGACATCTCCAAGGACTGGTTCTTCGCACACGTCACAAGAAAGCAAGGCGACGGGTATGCGGCGACGACGAGGCAGATCCGGTTCAGGCTGGAGCGCGTCGTGGCGGACGCCACCTACACGCTCCGCGTCGAGCTGGCGGCGGCGCAGATGGCGAGGGTGCAGGTGGTGGTGAACGGCCGGGCGGACGAGGCGTTGACGACGGCGGCGGCGTTCGGCGACGGGAACGCGATAGCGCGGCACGGGGCACACGGCGTGCAGTGGAGCTTGGAGTTCGCGATCAAGGGGTACATGCTGGTGGAGGGAGAGGAGGAGAATGTGGTGTTCATCACGCAGACGAGGGCGTTGAGCCCCTTCTTCGGCGTCATGTATGATTACATCCGTTGCTCTGTCCCCGCGCTACTCCTTGTGTCGAGTTGCACCATCGACATCATGGCAAGGTGCCTCAGCTCCCCGAGCCTTAAGTCCTTGGCAACATCTCGCTCGAGCTCGAGCCCCACGCTTGCCATCACCACGTCGAACTCGAGTGACTCTTCCTCCGAAGTGAGCCAACCCTCCTTGGCCCTCTCCGTTCCAACTGCCAGCATGATTCGGTGGCATGCCTCTGGTGACGGTTGGCGAGCTAGGGTTGGCTTCCAGGTGGCGGAGCAAAGCATATTGTTGGCTTCAACGACAACTACTGTTCATGGTGTACAAATCGATCCCAATGACATTATCAAGACCATAGAGGTAAGAATTTCTACATTATGTTAA
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Protein seq | MQVMVDNGIVQVSLSKPGGHITGVRYNGERNLLRFDGQPNSAGLDSTEFKVVSSSEDQVELSFRSTYNPSRPNSVRLNIDKRLVMLKGSSGFYCYAIFEHVRDWPALNISEARLAFKLNTDNLILKTCVHERFVRFNYMAISDDIQRFMPSATDRDAPRGAPLAYKEAVLLVDPKEPQFRGEVDDKYEYSLDNKDNRVHGWISSNHPNPMGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFLGTHYVGNDIVLKIEEGEYWKKVMGPVFIYLNSNPRRGDLHSLWVDAKLQAEAEARKWPYSFPVSPDFHKASQRGSVTGRLFVRDRYMSSKDMAAGMAFVGLATPGQPGSWVTESKNYQFWTRATPCGSFSISNVRAGVYNLYAWVPGFLGDYISGPTLWEMGVPDRSAAEFFIPDPNPKYLNKIFITKDKYRQYGLWERYAELYPDGDLVFTIGESDISKDWFFAHVTRKQGDGYAATTRQIRFRLERVVADATYTLRVELAAAQMARVQVVVNGRADEALTTAAAFGDGNAIARHGAHGVQWSLEFAIKGYMLVEGEEENVVFITQTRALSPFFGVMYDYIRCSVPALLLVSSCTIDIMARCLSSPSLKSLATSRSSSSPTLAITTSNSSDSSSEVSQPSLALSVPTASMIRWHASGDGWRARVGFQVAEQSILLASTTTTVHGVQIDPNDIIKTIEVRISTLC
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0131900 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g03790 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os12g0131900 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0002100 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0002300 | RBH | 0.0 | 0.0 | 0.109778 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0002320 | RBH | 0.0 | 0.0 | 0.221472 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002230 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002340 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0027600 | RBH | 0.048729 | 0.0839285 | 0.0234915 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0002350 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0028900 | RBH | 0 | 0.0900135 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0002150 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0002330 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0002360 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0002310 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002310 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002220 | RBH | 0.0 | 0.0 | 0.315910 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0002430 | RBH | 0.0 | 0.0 | 0.0 |