Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_12g0000050 | OGI:11000270 | 8/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr12:20012-27494 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CAATCTGAAAGGAAACGTTCTGATAATCATATCACGGTATTATGAATCGATCTTGTTTTTTGGTCGTTTTTGATACAAGAATTCGAGGGGGAGAAGAGAACAAGAGCCAATGTAAGAATGAACGAGAATGAATGCACATGATCATTTCAAAAGTGCACGACGACCTGAAGGACAAATTCACCCAAAATTCGTTGCTCGGTGGCAAATCTAAACAAGTCATGCACAGCTTGCTTAACCTATCAACGAATATTAGAAATATAGTATTAGAAGAGTCTGTAATCCGTATGTGCTACCTCTACCTGAGACCTGGGCGCATGAGCAGCTCATCAAACGACGCATTCTGCTCCAGGTCTTGCAGACTGCCTGTCGTGTTGACGGCTTCGGAGGGAGACGTCTTGGACATGAGGTGGTGAATGCTGGAGGGCAGCTCCCGTTGCAGCTCGATGGCAATGGCGTCCTGAATCTCCTTGAGCACCTCCGAGATGGACGGCCTCAGCACCCCCTTGGGCTTCACGCACATCGTCGCCACCTCCGCAATCTTCCACACCGACTGCAGGTCGTACCCTGCGTCTAACGACTGATCAATGATGCCGTGGATATCCCCACTCTCCATGTGCGATCTAGCCTGCCAATGGACAACTCTTCACTCAGCATCTTTGTCTGCGCCAATCGCTCGGATATCTTTGATAATTCACTATCAGGAAGAAAGACTAAATGCAAAGTTCATGTATCATCATAAGGCCTACTACTTCTTACCCATTCAACAATGTTACGGCAGTGGAGCCCAAAGTTGTCATTTGAGATTGGTTCATGGCCTGAGATTAGCTCAAGTAAAATGACACCAAAACTGTACATATCACTCTTCTCTGTTAGCTGCTGCGAGATATAGTACCTACGAGCACACGCAAAAAGGGTGAGCTTGGGGAACACTTGGCATCAGATGTTACAAAGGTATATAGCAATTCAATTTGCAAGGCCATTGATAACAAGAATAGACTTCATAAATTTCAGGAAAGACATGGCCTTACTCTGGGTCCAGATATCCAACTGTTCCTCTAACTATACTTGATACATGAGACCCGTCGACAACAGGTTTTGACAAGCCAAAGTCTGCAACTTTTGCTCTCATGTTCTTGTCAAGGAGAATGTTACTGCTCTTGAGGTCTCTGTGGATGATAGTTGGGGAGCATCCTGTGTGGAGATACTCTATTCCTGATATTTTATTTTATTTTTCATGGAAATGAAAGACTTCAGAATCTTTGAAATGCATGTTGGTAGAATAATCACAGGAAAATTGTACACGAGGAAGGGAGGGAGATAAACCTTTTGCAGCATCTTCTGCTATCTCAAGACGCTTGACCCAGCTATTTATTTTTACATCATCAGGGCCTCCTGTCAAAGTATGATAAAGTTCATGTCAATCCTGAGCCTCAGTGTCAAAGAATCATGCACGAGCTAGACAAGTAGACAAAGCCGCAGCTGAGCCTTGATTTATGTGTAGTATGGAAACTTCTGAAATCTTGACAGTTTGTATTCAGTTCTTAGTTAAGACTGGAAAGAAGTAAACATCAGAACAGAAAAGAAAAGGCTTATACATCAGTGAAGATCCTATAAGTTTTTCAGAACACGAATCCTTATCCAAAACTGGAAAAAGAAAACTCAAGCATGAATTTGCTGTATTATCTAGGGAAATATCAGGTGAAAAGTACCAATCTGATAAAATCGTGGAAACCACTGCACAAACTATGCATATGACTCCAAAAAATTTCTCAAAATAATTACTGTATGAGGGGAGGAGATAATGAGATACCATACGAAATCATGGAGACCCTAATATTCTAAAATATAACTACGCATGGAACATTTACTTGTAGAAGAATCATTCTCTACACAACGACAATTTGGTGTTGATTCTGCAAACTAGATTTATCATCAGATGGTAGGACCATAGGAACTTACCACGGAGGTGTTCTTTTAACGTCCCGTTATGCATGAATTCATACACAAGTATATTTTTACCATCTTGCTGGCTGTAACCAAGGAAGCTCACCAGGTTTCTATGATGAATTCTTGAAAGCAATGTTACCTGAAACATAAGTCCATCAGATACTATACTAAGCAACGGATCGCAGTAACCACCCAAAGAAAAAGTATGCGCGCTGAGTTTTCCAGTAGACCTTGAGAAAAGGATATATGAGGGATGCCTACATAGAGGGTGAGGGTCCATAGGATGTTCCAAATAGAAAATGTTCATATCTTATACTACTTAAAATAAATTGAGGTTATAAGTATATGTAACGCAACATGGTCACATCCCATTAGTGTAGGTCTATCAATTAAGTAGGAAATGAATGTGTCCCAGAATATACTGGGCTTCAGCTTCAGCTTCAAGGTTTCAATCTACCAAGCAGTGGTAAAATTAGCAATAGGTACGCAAGTTCTATTTATATCTTAAACTGTTAAACTGTGAAAAACAGCCCATTTTGGGCCGAACGCAAAGCCTTTTTGGGCCCTGGGTCAACACTCATTAAACTGTGTGCACAAAGGTTAAAATTCATCTGTTTTTGGCTAAAGGCTACTCATGAGTCATTGGGTCAAAGGCTAATATAGATGCACTTTTGGGCCCAAGGTTGACTCACGAAGTTTTGGGCTGAAGGCAAATAGTAACGTGTTTTTCAGCTGAAGGTATTAGGGTCACGTGCTTTTGAACTGAAGACTGATACTCATGTGTAGTTGGGCCAAAGGCTAATATTCATGTGTTTTTGGCCCCAGTGATAATACTTGTGCCCAAGACTAATACTCATGTGCACTTTGGCCAAAGGCTAATAATATTCATATGTTTTTGGCCCAAATTAATACTCACAATTTTTTTTGGGTTGAAGACTATTAATCATTTGTTTTGGGGTCAAAGGTTATAATCCATACATTTTTAGCCCCAAGGTTAATAATCATGAATTTTTTGAGCAGAAGGCTAACATTCATGTGTTTATGGGTCTAAGGTTGAGGTTGAGTTCTTTTCAGCAACTTGAAACAACAACTTCCTCGTTTTCCGTCAACATGCTTCCCAAACTGCTAAACGATGCGTTTTGTGAAATATATAGAAGTTCTTAAAAAAAATCAAATAAATCCATTTATTAAATTTATAATAGTTAATACTCCGTCCATCCTCAAATGTAAGACATATTTCTTTTGTCACCAAGACCAAGGAGAAATTACTCATCTCCCATGTAACAAAATCAAGGAACTATATGCATGCAACCAATGAATATTAAGATGGTTGCTTGGGTTCCTGTCAACAATTAATTTAGCACATGAAGACTACAAATATAATCATCTCTTTTAGAAAAACCAAAAAAAAATTGCCTAACACTTTTGGATGGAGGGAGTACGTAACTAATTATGTGCTAATGATATGCCCCGTTTCCGAGCTGCGAACCGCTGCAGCCAAACTGCTGGTTCGAACTAGCCCTAAGAGTAAAGAAATTATGGGGCAAAAGCTAATATTCATGTGTTTTTTGACCAAGGTTAACACTCTTGAAATTTTTAGACGAAGCCCAAATTCATGCACTTATGGTCCCAAGGTCAATACTAATGAAATTTTGTGCCGAAGGTTAATACTTGTATGTTTTTTTGGTGGAAGAGTAATACACCTGTGTATTTGGAGTAAGGCAAATATTCTTGTGTTTTTTCAGCTCAAGGATAATATTCATGACATTTTGAGCGAAGGTAATATTTATGTGATTTGGGCTCGAAGGTAATACTCATGTGTTTTTGAGCTGAAGGCTAAACAATCATGCATTTTTGGCCCAAGCTAACATTCATTTGTTTTTGGGCCCAAGGTTAATACTCATGTGTTTTTGGACCAAAGACTTAATAGTTGTGTCATTGAGGTGAAGGCTAATAGTCAACCATTTTTGGGCCCAAGGTTAATTTTTGGCCAAACGGGAATAGTCATCCATTTTTAGCCTAAGTTTAATAGTCTTCATATTTTAGGCCGAACGCTAACACTTACTGTGTATGTGATTTATATTTCAAGAAAAAACTATAAGGCAAGAAAAGAAACATACCTCATTCAGGAATTCTCGGATGCCTTGATAGGAGTCATTTGTGAGAAGTTTGACTGCGATTTCTCTCCCATCTGTAAGCTTTCCATAGTATACTATGCCAAACCCTCCCGAACCAATTCTTCTGTCAAATTTGTCAGTAGCATCTTCAATTTCAGACAATGCAAATCTGTGCGCCGATTCCGTGGCCACTTCACTGAAAAATGAGCCTAGCTTTTTTGCTGGTGCCGCAATAACAACGGTTTCTGGAGACACAAAGTAATTACTACGCGACCATACACCATACCAGATATGTCCAATGAGCTAAAGAATACGCACCGTCCGATGATTTCTTCTTCCTTTTGCATGTGAACAGGTAACAAACAATAGCAGCAACAAGAATCAAAATGGCCCCAACCACAGCACATACAATAATTACTATAGTGCGGCCAGTGTTACTGTGTCCCATGCGAAGGTCACTGTTTCCTGAGAAGCTGCATACGGGTAACAGATCAGAACAAACAGCACAATCCTATGCACAAGTTAGGTACTCGATTTACATGGGAAACAAATATATACTTTCATCGAAGGTAAATGAAGCTTGCTAAGCCACACTGGAGTTCATATAGGCACAAAAGTATGCACTGCTCATATCAAATGATTAAGCTATGCTTAAAGAAAAAGCTACACATACTTGAAAATAATGCTCTTTTTGAAAAGCGCTTGTGGGACCTCTCCAGACAGCTTATTGTTCTGAATATACCTGTGAAGGCTTGGATCAGTAAGGTATTTTTGTTTCAATACAATGAATAAAGCAGTAAAATGAGATAAAATCTATAGCAATGATGCATGTTGAGGTCTTGAGGATCATAAGAACAAAATAACAGCACAAATTCATATTTACTGCACTTGCAATACAAATAGCATGGGGGTGGAAAGAAAGTGTACTGAAGCGTATAACTTACAACTCTTTCAGGTTAGGTAGTTCTCCCAAGGAAGGTGGCAATGCACCGGTTAATTGGTTGTCCTCAAGGTGACTGCAGTGCAGACACAAGCACCCTAAGTGCTAAATTACAAGAATAATGTTTCCAGGATACACTATCAAAATAATGGAAAACTCACATATATTGTAAATCATGGCATCCAGTGAAATCAGGAATTTGACCAGTAAATGAGTTACCATCAAGCTTTCTGAATTTGAAGAAATAAATTTATCAGAAAAAAGCCAACTACAAAGAGGGGAGAGCAAAAAATAAACTATTCTGATCTTACAGTTCGACCAGCCCCGATAGCTTCGTTAATTCCACAGGGATACTCCCTGTAATGTTCTTCCCTGACAATGAGCTGCAAGAAATGATCCTTAGATCTCAAATGTTCAAATATTGAGCACAAAAACTCAAAATTGAAGGCAGATTGACAGGATCATCTTACATTGAAAATATCCTAGGTGCTGCCTCAGAACTGCATTGCACCCAAGACCATGATGCTGGTAAGCAAGGGTCACCACCCTCTTGTGCCCAACCTGCTTCTGGATACCGTGAGACCAAGCTGGCCATAATGTTTGCTGTCAATATAACCAGAAGACCAAATTATAACACAGCAGGTGTATTTTTCCATTTATTCTACAACACAGACAGACAGACAATTGCTTACCATCTTGAGATCCCACAGAAATCTCTATATATTTGTAGATCTCCATGGCATTCAATATAGGTCCCTCTGACGAATCATTAGTCTTCTTGAATCCAAAAGAGAAAACAAATGGAAGTGGAATATTTGTGTAGCCTGGTTCATATAGACGATACTTTCCCTGAGCATTCTCTTCCACATCAACAGTTGGTTTACTGAATTCTGGCTTGCCTGGAATGACTAACTTAAATTTCCTAGTTTGATTTGGGGTCAAATCTTCAATTTCTGCAAAATATGAGACTCCCCATGCATTTCCTGGGAAATCTTCCAAATCAATCCGGTAGGTCAAGGATCCATTTTTGCCAACAACTGCAGTTTGCATGACCCTTTGAGGTGGTTCTTCGTTGGTACTGACGAAGATGGGTTTTGTAGTTGATATTCTCTCCGTCCCCGGAGCAACATCGACAAGGTAATTTGCTCGCCTCACTAAATCAGACTCCCATATTCTATCAAATGGATCATCAGGATACCTGAAAACATCATCAACAACAAATTCTTTAGGCAGATATTGCAACGAAAGTATGAACAATGGTGCTACGCAGCAGTAGTAGCGCATACCTGACTGATGCATTGCTTTCAGCACCAAAATTGATCCTCGCAGAGAGTCTAAGAAAGAACTGTTTTTCATCAGTGGTGTAGTAGAGGGAGCCGTTAAATTGGCGAAGCTCGAGAGTAGAAATAAAGGGCTGTCCAGTGCTGGCATTAGAGAGGCAAACGCTGAGTGTTGGAGCAGCAGCGAGGATAATCGCCTCCTGGACGACTGGGGTGGTGGCATCATCAATGACAACGGTGGTCCATGGGGTCGGTCCAAGGGAGAGATCAAACTTTGGGTAGACATTGCTGTTGTCGAAGTTGCCATAGAGGAAGGTGGCTCTAACAAGGTAGCGTGTTCTGTTCCTGACATTCATGGTGTAGCAATACTTCCTGTTGTCTGCTGGAAAAGAGCGAACGGTGGTATATTGCTGCAATTGTTGATTTTGGAGCAAGAGGTTCGCTTTCTGGCCAGCAGAGACAAACTTGGCATCAGAAGTCCACTGGATCCCAATGCCATCCGTGTAATCATCGTCTCCCCCGCAATCCAAGCTGATGAAACCTGCATGCATCAAATCAAAGATGGAATTTTCTTGTAGAGATTTATATTTGGAGATGGATTTGATTTCCCAGCCCTGAAGCTGAAGGAGGTCCAGCGAATGGTAAAGAAGGGTGGAAATTATTGAGTTCCAAGAAACTCGAAAAGAAAAGAAGGGAGTAGGGTGAGTGAGAGGGAGAGTGACTGACCAGGCTGAGCATTGGAGAGCGAGAAGGCGACGAAGAGGAGCACAAGAGCGGCGGAAGCAGACGGCATCTCCCTCAGTAATCTGAATTGATGATGGATTGATTAGCACAGCAGTGGGTGCGGGCTGGTGAATCAATCCATATGCTCCCTCCTTGGAACAAGTCCTAAAACAAAAGGAAAAGAGAGGATTGAAATTTTGTTGGTAGCTGGGGTTGGGGAGAGAGGGGCAATCACCAATTCTCTCTCTCTCTCTCTCACACACACACACAGGCAAGAAAGAGCTCAACCAGAAACAGCCAGGGGAGTGAAGAGAATACCAAACCAAGCAGGAGTATTCCAAGAAGAAGAAGAAGAGGAGCAGGACAGGAGGAAGGGGAAAGAAGAAGACAGGAGGGTCCCAATCCCAGTCTCCTGCTCTCACTCACAGCCAGCCTCTGCACCCTCTGTCTCTGTGTAATAATCTTGGAGAAAAGCA
More
|
||||||||||
| CDS seq | ATGCCGTCTGCTTCCGCCGCTCTTGTGCTCCTCTTCGTCGCCTTCTCGCTCTCCAATGCTCAGCCTGGTTTCATCAGCTTGGATTGCGGGGGAGACGATGATTACACGGATGGCATTGGGATCCAGTGGACTTCTGATGCCAAGTTTGTCTCTGCTGGCCAGAAAGCGAACCTCTTGCTCCAAAATCAACAATTGCAGCAATATACCACCGTTCGCTCTTTTCCAGCAGACAACAGGAAGTATTGCTACACCATGAATGTCAGGAACAGAACACGCTACCTTGTTAGAGCCACCTTCCTCTATGGCAACTTCGACAACAGCAATGTCTACCCAAAGTTTGATCTCTCCCTTGGACCGACCCCATGGACCACCGTTGTCATTGATGATGCCACCACCCCAGTCGTCCAGGAGGCGATTATCCTCGCTGCTGCTCCAACACTCAGCGTTTGCCTCTCTAATGCCAGCACTGGACAGCCCTTTATTTCTACTCTCGAGCTTCGCCAATTTAACGGCTCCCTCTACTACACCACTGATGAAAAACAGTTCTTTCTTAGACTCTCTGCGAGGATCAATTTTGGTGCTGAAAGCAATGCATCAGTCAGGTATCCTGATGATCCATTTGATAGAATATGGGAGTCTGATTTAGTGAGGCGAGCAAATTACCTTGTCGATGTTGCTCCGGGGACGGAGAGAATATCAACTACAAAACCCATCTTCGTCAGTACCAACGAAGAACCACCTCAAAGGGTCATGCAAACTGCAGTTGTTGGCAAAAATGGATCCTTGACCTACCGGATTGATTTGGAAGATTTCCCAGGAAATGCATGGGGAGTCTCATATTTTGCAGAAATTGAAGATTTGACCCCAAATCAAACTAGGAAATTTAAGTTAGTCATTCCAGGCAAGCCAGAATTCAGTAAACCAACTGTTGATGTGGAAGAGAATGCTCAGGGAAAGTATCGTCTATATGAACCAGGCTACACAAATATTCCACTTCCATTTGTTTTCTCTTTTGGATTCAAGAAGACTAATGATTCGTCAGAGGGACCTATATTGAATGCCATGGAGATCTACAAATATATAGAGATTTCTGTGGGATCTCAAGATGCAAACATTATGGCCAGCTTGGTCTCACGGTATCCAGAAGCAGGTTGGGCACAAGAGGGTGGTGACCCTTGCTTACCAGCATCATGGTCTTGGGTGCAATGCAGTTCTGAGGCAGCACCTAGGATATTTTCAATCTCATTGTCAGGGAAGAACATTACAGGGAGTATCCCTGTGGAATTAACGAAGCTATCGGGGCTGGTCGAACTAAAGCTTGATGGTAACTCATTTACTGGTCAAATTCCTGATTTCACTGGATGCCATGATTTACAATATATTCACCTTGAGGACAACCAATTAACCGGTGCATTGCCACCTTCCTTGGGAGAACTACCTAACCTGAAAGAGTTGTATATTCAGAACAATAAGCTGTCTGGAGAGGTCCCACAAGCGCTTTTCAAAAAGAGCATTATTTTCAACTTCTCAGGAAACAGTGACCTTCGCATGGGACACAGTAACACTGGCCGCACTATAGTAATTATTGTATGTGCTGTGGTTGGGGCCATTTTGATTCTTGTTGCTGCTATTGTTTGTTACCTGTTCACATGCAAAAGGAAGAAGAAATCATCGGACGAAACCGTTGTTATTGCGGCACCAGCAAAAAAGCTAGGCTCATTTTTCAGTGAAGTGGCCACGGAATCGGCGCACAGATTTGCATTGTCTGAAATTGAAGATGCTACTGACAAATTTGACAGAAGAATTGGTTCGGGAGGGTTTGGCATAGTATACTATGGAAAGCTTACAGATGGGAGAGAAATCGCAGTCAAACTTCTCACAAATGACTCCTATCAAGGCATCCGAGAATTCCTGAATGAGGTAACATTGCTTTCAAGAATTCATCATAGAAACCTGGTGAGCTTCCTTGGTTACAGCCAGCAAGATGGTAAAAATATACTTGTGTATGAATTCATGCATAACGGGACGTTAAAAGAACACCTCCGTGGAGGCCCTGATGATGTAAAAATAAATAGCTGGGTCAAGCGTCTTGAGATAGCAGAAGATGCTGCAAAAGGAATAGAGTATCTCCACACAGGATGCTCCCCAACTATCATCCACAGAGACCTCAAGAGCAGTAACATTCTCCTTGACAAGAACATGAGAGCAAAAGTTGCAGACTTTGGCTTGTCAAAACCTGTTGTCGACGGGTCTCATGTATCAAGTATAGTTAGAGGAACAGTTGGATATCTGGACCCAGAGTACTATATCTCGCAGCAGCTAACAGAGAAGAGTGATATGTACAGTTTTGGTGTCATTTTACTTGAGCTAATCTCAGGCCATGAACCAATCTCAAATGACAACTTTGGGCTCCACTGCCGTAACATTGTTGAATGGGCTAGATCGCACATGGAGAGTGGGGATATCCACGGCATCATTGATCAGTCGTTAGACGCAGGGTACGACCTGCAGTCGGTGTGGAAGATTGCGGAGGTGGCGACGATGTGCGTGAAGCCCAAGGGGGTGCTGAGGCCGTCCATCTCGGAGGTGCTCAAGGAGATTCAGGACGCCATTGCCATCGAGCTGCAACGGGAGCTGCCCTCCAGCATTCACCACCTCATGTCCAAGACGTCTCCCTCCGAAGCCGTCAACACGACAGGCAGTCTGCAAGACCTGGAGCAGAATGCGTCGTTTGATGAGCTGCTCATGCGCCCAGGTCTCAGGTAG
More
|
||||||||||
| Protein seq | MPSASAALVLLFVAFSLSNAQPGFISLDCGGDDDYTDGIGIQWTSDAKFVSAGQKANLLLQNQQLQQYTTVRSFPADNRKYCYTMNVRNRTRYLVRATFLYGNFDNSNVYPKFDLSLGPTPWTTVVIDDATTPVVQEAIILAAAPTLSVCLSNASTGQPFISTLELRQFNGSLYYTTDEKQFFLRLSARINFGAESNASVRYPDDPFDRIWESDLVRRANYLVDVAPGTERISTTKPIFVSTNEEPPQRVMQTAVVGKNGSLTYRIDLEDFPGNAWGVSYFAEIEDLTPNQTRKFKLVIPGKPEFSKPTVDVEENAQGKYRLYEPGYTNIPLPFVFSFGFKKTNDSSEGPILNAMEIYKYIEISVGSQDANIMASLVSRYPEAGWAQEGGDPCLPASWSWVQCSSEAAPRIFSISLSGKNITGSIPVELTKLSGLVELKLDGNSFTGQIPDFTGCHDLQYIHLEDNQLTGALPPSLGELPNLKELYIQNNKLSGEVPQALFKKSIIFNFSGNSDLRMGHSNTGRTIVIIVCAVVGAILILVAAIVCYLFTCKRKKKSSDETVVIAAPAKKLGSFFSEVATESAHRFALSEIEDATDKFDRRIGSGGFGIVYYGKLTDGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRNLVSFLGYSQQDGKNILVYEFMHNGTLKEHLRGGPDDVKINSWVKRLEIAEDAAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPVVDGSHVSSIVRGTVGYLDPEYYISQQLTEKSDMYSFGVILLELISGHEPISNDNFGLHCRNIVEWARSHMESGDIHGIIDQSLDAGYDLQSVWKIAEVATMCVKPKGVLRPSISEVLKEIQDAIAIELQRELPSSIHHLMSKTSPSEAVNTTGSLQDLEQNASFDELLMRPGLR |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g67720 [UniProtKB/Swiss-Prot:C0LGI2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_12g0000050 | OsARC_12g0000050.01 | Chr12 | 20012 | 27324 | - | NAM | ||
| CDS seq | ATGCCGTCTGCTTCCGCCGCTCTTGTGCTCCTCTTCGTCGCCTTCTCGCTCTCCAATGCTCAGCCTGGTTTCATCAGCTTGGATTGCGGGGGAGACGATGATTACACGGATGGCATTGGGATCCAGTGGACTTCTGATGCCAAGTTTGTCTCTGCTGGCCAGAAAGCGAACCTCTTGCTCCAAAATCAACAATTGCAGCAATATACCACCGTTCGCTCTTTTCCAGCAGACAACAGGAAGTATTGCTACACCATGAATGTCAGGAACAGAACACGCTACCTTGTTAGAGCCACCTTCCTCTATGGCAACTTCGACAACAGCAATGTCTACCCAAAGTTTGATCTCTCCCTTGGACCGACCCCATGGACCACCGTTGTCATTGATGATGCCACCACCCCAGTCGTCCAGGAGGCGATTATCCTCGCTGCTGCTCCAACACTCAGCGTTTGCCTCTCTAATGCCAGCACTGGACAGCCCTTTATTTCTACTCTCGAGCTTCGCCAATTTAACGGCTCCCTCTACTACACCACTGATGAAAAACAGTTCTTTCTTAGACTCTCTGCGAGGATCAATTTTGGTGCTGAAAGCAATGCATCAGTCAGGTATCCTGATGATCCATTTGATAGAATATGGGAGTCTGATTTAGTGAGGCGAGCAAATTACCTTGTCGATGTTGCTCCGGGGACGGAGAGAATATCAACTACAAAACCCATCTTCGTCAGTACCAACGAAGAACCACCTCAAAGGGTCATGCAAACTGCAGTTGTTGGCAAAAATGGATCCTTGACCTACCGGATTGATTTGGAAGATTTCCCAGGAAATGCATGGGGAGTCTCATATTTTGCAGAAATTGAAGATTTGACCCCAAATCAAACTAGGAAATTTAAGTTAGTCATTCCAGGCAAGCCAGAATTCAGTAAACCAACTGTTGATGTGGAAGAGAATGCTCAGGGAAAGTATCGTCTATATGAACCAGGCTACACAAATATTCCACTTCCATTTGTTTTCTCTTTTGGATTCAAGAAGACTAATGATTCGTCAGAGGGACCTATATTGAATGCCATGGAGATCTACAAATATATAGAGATTTCTGTGGGATCTCAAGATGCAAACATTATGGCCAGCTTGGTCTCACGGTATCCAGAAGCAGGTTGGGCACAAGAGGGTGGTGACCCTTGCTTACCAGCATCATGGTCTTGGGTGCAATGCAGTTCTGAGGCAGCACCTAGGATATTTTCAATCTCATTGTCAGGGAAGAACATTACAGGGAGTATCCCTGTGGAATTAACGAAGCTATCGGGGCTGGTCGAACTAAAGCTTGATGGTAACTCATTTACTGGTCAAATTCCTGATTTCACTGGATGCCATGATTTACAATATATTCACCTTGAGGACAACCAATTAACCGGTGCATTGCCACCTTCCTTGGGAGAACTACCTAACCTGAAAGAGTTGTATATTCAGAACAATAAGCTGTCTGGAGAGGTCCCACAAGCGCTTTTCAAAAAGAGCATTATTTTCAACTTCTCAGGAAACAGTGACCTTCGCATGGGACACAGTAACACTGGCCGCACTATAGTAATTATTGTATGTGCTGTGGTTGGGGCCATTTTGATTCTTGTTGCTGCTATTGTTTGTTACCTGTTCACATGCAAAAGGAAGAAGAAATCATCGGACGAAACCGTTGTTATTGCGGCACCAGCAAAAAAGCTAGGCTCATTTTTCAGTGAAGTGGCCACGGAATCGGCGCACAGATTTGCATTGTCTGAAATTGAAGATGCTACTGACAAATTTGACAGAAGAATTGGTTCGGGAGGGTTTGGCATAGTATACTATGGAAAGCTTACAGATGGGAGAGAAATCGCAGTCAAACTTCTCACAAATGACTCCTATCAAGGCATCCGAGAATTCCTGAATGAGGTAACATTGCTTTCAAGAATTCATCATAGAAACCTGGTGAGCTTCCTTGGTTACAGCCAGCAAGATGGTAAAAATATACTTGTGTATGAATTCATGCATAACGGGACGTTAAAAGAACACCTCCGTGGAGGCCCTGATGATGTAAAAATAAATAGCTGGGTCAAGCGTCTTGAGATAGCAGAAGATGCTGCAAAAGGAATAGAGTATCTCCACACAGGATGCTCCCCAACTATCATCCACAGAGACCTCAAGAGCAGTAACATTCTCCTTGACAAGAACATGAGAGCAAAAGTTGCAGACTTTGGCTTGTCAAAACCTGTTGTCGACGGGTCTCATGTATCAAGTATAGTTAGAGGAACAGTTGGATATCTGGACCCAGAGTACTATATCTCGCAGCAGCTAACAGAGAAGAGTGATATGTACAGTTTTGGTGTCATTTTACTTGAGCTAATCTCAGGCCATGAACCAATCTCAAATGACAACTTTGGGCTCCACTGCCGTAACATTGTTGAATGGGCTAGATCGCACATGGAGAGTGGGGATATCCACGGCATCATTGATCAGTCGTTAGACGCAGGGTACGACCTGCAGTCGGTGTGGAAGATTGCGGAGGTGGCGACGATGTGCGTGAAGCCCAAGGGGGTGCTGAGGCCGTCCATCTCGGAGGTGCTCAAGGAGATTCAGGACGCCATTGCCATCGAGCTGCAACGGGAGCTGCCCTCCAGCATTCACCACCTCATGTCCAAGACGTCTCCCTCCGAAGCCGTCAACACGACAGGCAGTCTGCAAGACCTGGAGCAGAATGCGTCGTTTGATGAGCTGCTCATGCGCCCAGGTCTCAGGTAG
More
|
|||||||
| Protein seq | MPSASAALVLLFVAFSLSNAQPGFISLDCGGDDDYTDGIGIQWTSDAKFVSAGQKANLLLQNQQLQQYTTVRSFPADNRKYCYTMNVRNRTRYLVRATFLYGNFDNSNVYPKFDLSLGPTPWTTVVIDDATTPVVQEAIILAAAPTLSVCLSNASTGQPFISTLELRQFNGSLYYTTDEKQFFLRLSARINFGAESNASVRYPDDPFDRIWESDLVRRANYLVDVAPGTERISTTKPIFVSTNEEPPQRVMQTAVVGKNGSLTYRIDLEDFPGNAWGVSYFAEIEDLTPNQTRKFKLVIPGKPEFSKPTVDVEENAQGKYRLYEPGYTNIPLPFVFSFGFKKTNDSSEGPILNAMEIYKYIEISVGSQDANIMASLVSRYPEAGWAQEGGDPCLPASWSWVQCSSEAAPRIFSISLSGKNITGSIPVELTKLSGLVELKLDGNSFTGQIPDFTGCHDLQYIHLEDNQLTGALPPSLGELPNLKELYIQNNKLSGEVPQALFKKSIIFNFSGNSDLRMGHSNTGRTIVIIVCAVVGAILILVAAIVCYLFTCKRKKKSSDETVVIAAPAKKLGSFFSEVATESAHRFALSEIEDATDKFDRRIGSGGFGIVYYGKLTDGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRNLVSFLGYSQQDGKNILVYEFMHNGTLKEHLRGGPDDVKINSWVKRLEIAEDAAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPVVDGSHVSSIVRGTVGYLDPEYYISQQLTEKSDMYSFGVILLELISGHEPISNDNFGLHCRNIVEWARSHMESGDIHGIIDQSLDAGYDLQSVWKIAEVATMCVKPKGVLRPSISEVLKEIQDAIAIELQRELPSSIHHLMSKTSPSEAVNTTGSLQDLEQNASFDELLMRPGLR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_12g0000050 | OsARC_12g0000050.02 | Chr12 | 20136 | 27494 | - | IsoSeq | ||
| CDS seq | ATGTCAGGAACAGAACACGCTACCTTGTTAGAGCCACCTTCCTCTATGGCAACTTCGACAACAGCAATGTCTACCCAAAGTTTGATCTCTCCCTTGGACCGACCCCATGGACCACCGTTGTCATTGATGATGCCACCACCCCAGTCGTCCAGGAGGCGATTATCCTCGCTGCTGCTCCAACACTCAGCGTTTGCCTCTCTAATGCCAGCACTGGACAGCCCTTTATTTCTACTCTCGAGCTTCGCCAATTTAACGGCTCCCTCTACTACACCACTGATGAAAAACAGTTCTTTCTTAGACTCTCTGCGAGGATCAATTTTGGTGCTGAAAGCAATGCATCAGTCAGGTATCCTGATGATCCATTTGATAGAATATGGGAGTCTG
More
|
|||||||
| Protein seq | MSGTEHATLLEPPSSMATSTTAMSTQSLISPLDRPHGPPLSLMMPPPQSSRRRLSSLLLQHSAFASLMPALDSPLFLLSSFANLTAPSTTPLMKNSSFLDSLRGSILVLKAMHQSGILMIHLIEYGSL |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.256344 | 0.642497 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0102500 | RBH | 5.048846 | 4.051795 | 4.326017 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g01200 | RBH | 2.371904 | 2.099131 | 0.911178 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0102500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0000040 | RBH | 0.613222 | 18.934620 | 10.304501 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0000190 | RBH | 0.367838 | 4.551999 | 2.605781 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0000170 | RBH | 1.529664 | 16.935455 | 17.356194 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0000190 | RBH | 0.097814 | 0.316815 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0000170 | SBH | 3.099979 | 18.377777 | 20.090588 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0002000 | SBH | 4.556156 | 10.168432 | 6.2693345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0000190 | SBH | 0.195244 | 1.542177 | 1.205687 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0001800 | RBH | 12.7909575 | 15.3897805 | 37.649117 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0000050 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0000180 | SBH | 0.366671 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0000180 | SBH | 0.000000 | 22.162819 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0000190 | RBH | 0.912797 | 0.0 | 2.091886 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0000180 | SBH | 0.136415 | 11.630368 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G000190 | SBH | 0.239356 | 5.909908 | 4.781610 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0000180 | SBH | 0.337918 | 20.233103 | 7.138532 |
