Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_11g0019310 | OGI:11067890 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr11:22878516-22884059 | ||||||||
| Gene Symbol | OsSERL1, OsBAK1-8 | ||||||||||
| DNA seq | GGCTGAATTTTGTGAGTCTTTTTTAAGAATTATGTTATACGTTAGAAAATTTCAAGTACAAGATCTATTCACAGGGTTACCATTTTACCAAGTATACATTAACACAAAAACACTATAGAATATAATCTATAGTAGTCTGTAGTCTATGTATACACATGAATGTCTGAACGAGATGTAGCTGCACGACATTGTGTTCACAGCATAAATGTTAGATACAGTTACTTATGCAAACCGTGAGGACTCTAGGCTATTCCTAACAATCCACAACTATAGCGAGTACTGTTGTCTCCCTTCACCCTTTCTTGGGAAACAAGTGAAGCTCATGTGATACAATTGTATGATCTTCCAGTTATCTGCCACCGGATAGCTGAATGTCTTCCTGGATATTGAGAGACTCCTCGCTCCTTCACCCTTTCTTGGGGAACAAGTGAAGCTCATGTGATACAATTGTATGATCTTCCAGTTATCTGCCACTGGATAGCTGAATGGCTTCCTGGATATTGAGAGACTCCTCACTGAAGCTGAACAGCCTGCGCTGTTGGTTCATCTCATGCTGATGCCGCCGGGCAAGTTCAGCCACCTGCCACTCCTCCCATTGCTCCGCTGGGACAACATTGCCTTCCAGCATCTGCACAACCTCTGACATAGCAGGGCGAAGATGAGGCTCCATATGAGTGCAGAGGAGTGCTATTTGGATCATCTTCTCCAGACCTTGCAAATCGTATGCATTGTCCAGGTTGTGGTCCACAATGTCTGTCAATCGTCCTCCTTGCACCAACCTTTTCACCTTCACATGTACCAAAGAGTCAATCCCATCAGGGTCATCTATGTGAAAAGATGAGACACCAACTTTCTAATTCTTCAGAAAATTTATGTTGCATTGTTCATACAATAAGTCAAGCATCATTCATAGTTATACCTAACTTCTACTCATATCAATTACATAGGTGAGAAGCTTTTGCTTATCTGATCTTAATATGCTTCCATTCTCTAGTTTAATAAGATATTATTAATGGTGTGCAATCTAAACTTTCTTTGGTAGCTATAAACGATAGTAAGGTAATGTAATTATATCTTACTTGATCATTGAGCATGATCTCACTGTCTCCTTCCGAGAATTCAGGGAACACTGCACGCTCTCCTGTCACTATTTCTAACAACATTACACCATATCCAAATATGTCTGTCTTCACTGATGGCCTTCCTGTCTTCAGGTACTCAGGAGCTATATGGCCCATTGTCCCGCGAACCCCAGTCGTAACTGTATTCCTCTCTCTGTCTATCATCTTCGCCAACCCAAAGTCTCCTACCACTGCTTCAAAGTTTCCATCAAGCAGGACATTGGCTGCCTTGACATCGCGGTGGATAATCTTGGGGTTGCAGTGCTCATGAAGGTATTCCAAGCCACGGGCAGCGCCAAGGGCAATTCGCACTCTTGTTGGCCAATCTAATGCTGGTTCATTTAGTTTGATATCTGCATGCATAGGTGTCATCAACAGTACTATTGCATTAGATATTTTTAGGGTTTGTATTATCATAAAAGGACCTATTTTTTTGGTGGTAACCTGCCTAAAGAAGTAGATAATTCAACGATTCAATTGCCTACACTTCCTTTTTATCAAGACACAGAAACCACATTTCCTTCTATTTCCTGGCACTGTTTTAACTAATATACCTCAATTGCATGCTAGCTTTAGTTGACATTGTAAATGAAGATGAATCATGAAAGCATATTCTAGGAACATGCTAAAGTGGTATTCTTATGTTATTGTTACCTCTCAAACGGGAAGCAACACTTAGATTCTCCATGTAAGGGTAGACCAAGAGTCGCTCTGTTGGAGTCGTGCAGAATCCTATCAATCTTAATATGTTCTTGTGCACAGCAATGCTTATCAATTCAACTTCTCTCAGGAAAGCTATTTCCCCTTCAGGCTTTTCCACTTCAAACAGTCTTTTAACTGCAACCTTTCTGCCGTGTGGACCTGAAAGCACTCCTTTGTACACCTTACCAAAACCACCCTTGCCAAGAACATTTTGCTCATTGAAATTGTTGGTTGCAATTTGGAGTTCTCGCCATGAGAACCGCTTTATCTGTCCAAACTCTAGATTGTGATCATGTTGACCTGAAATTGTTGCACATGCTTATCACCTTGGTAAAAAAGAAGTCTTTATTAATCTGTTTCAGTCCATGTGAAATTGTTCCTTAGCTAAATATGTTTCCTACGGTAACCATCACACAAATGTCATGCTGCTGAACTAACCTGGAACATCAATGTATATTTCAGATCGGTGGCGCATTCTTTGCCACCATAGCAGAAATAGTACTATAATAACAAGGAGAGTTATTGCTCCAGCAATGCTTGCAAGAACCACCTTGAGTGTGGAGTTATTTGATCCACCTGTTAATAAAAAGAATGGAACTGTTTATTGATCCAAATTAAGGGTGCAATATAGATTGCAATGTTGATTTCTATATTACCTGTATTAAAATTGCTTCCTTCACAAGAAATCAAGTGTTGGCCACAATTCAAATGGTTACCTATATAACTGGAATTACAATTGTCAGAACTGTGAAGCACTAGGCATAAAATTGCTTGTAGAATATATCCTTGCCTATACCTGTAGTGAGACACCTGAAGCAACCGTTTGGGTATTTCACCGCTCAGATTGTTGTCTGCTAGATTGCTGCAAATCACAGTGAGATGTGATACATCATATAATGTAACTGTAATCCAAGTGGTGATATTTGGCAAGTTCACAATGTTATCAATACAGAAAGACTTACATATCATTCAATGATGAGAGATTAGACAAAGAAGTTGGAATATTCCCGATTAAGAGATTTTTGCTCATGTCCCTGTCGAAGATTATGATCAACTACTACACTATTGACTCATAATCTTGTATTCTTAGAAAGACACAGAATTTGACTTACAGATTTTGGAGTTTTGAAAGACGGCCAAGAGAGTCAGGTATTGAACCATTTAAGCTATTTCCTCCAAGTTTTAGTGTTGTTAAGCTTGATAGGTTCCCTAACTCTTGTGGAATTCCTCCGGTTATGTTGTTATCATTCAATAATCTAGGAACAAAAAAGTAAAACGAACCACAAAGTAGATCTTTTATTGAGGAATGAGGATTAATCTTCAAATGTTAAATATTTTTAGGATTAAATTGCTAAGCTTACAGCTGTTGTAAATATAGTAGCTTTCCAATGCTGGGTGACAAGAATCCAGATAATCCTGATGAGCTCAAAGTTCTGCAAATTCCAGAAATGTGAAATTAACCATGTGTTTACCTCAAAAGGCTCAAAAATAAATTAACCATATGTGGTTACAAAGTTTTAATGTTATTTTTATTGTGAAACAAACTTATATACTACAAATATGAAACACTATAGTATGAAGTATGTGCAAGCCAATTGTAAAAACTTTTCCTTATGATCAATGGTTAGAGGCTAGAGCATGCATTTAACTAGCATAGCAGGAAAATAATGGAGTTAAGAGTTTCAGATATTCAACCTTGTTAAGAGGAAAATAATGAAGTTTAGAGTTTAAGATATTTAAGAAAAATGAAAGGGATAACTCACATTGAAATGACTTTTTGATCTTGATTACAACTGATGGAAGGAAAATAGCAGGGACTAACTTGATTATTATTCCAGCCATTCAGTACGCCGCGACTGTCATTGAGCATTGTCCTTATTTCATACAATGCTATGACTGATGAGGAAAATAAAATCGTTATATTTGCAAATTATGAGACACATTCAGTGAAAATGAATTGGAAGTGGTAATATTCTTCTTATTCAATGTCCCATATGCAATATGGATTTAGAGCGAGTACATTATCTAACCAAGAATTTTGAGCAATCTTGTTCAATTATGAACAATTGTGAGCAAGCATATTTGCTACACTGGAAGAAAAATGCAGATGTGCTAAATAACTGAAGGAGTAGTTGTGCTTTCTAGTAGGCTAGTAGTAAATACAAGTGCTCTAGAATCTGTTATGCAGTTGATAGTCAAACATTTGACTGATGACAAGGACAAGATGTCATATCCACAACACACACTAGCGTTCTCAGTAAATATCGTGTTAGTCAAAAACTCAATAATGCAATAATTCCAGAGTCTCTTGCAGTTCACAGTCAAAATTCTCAGATTGATTCCATTGCCTCTTCTAATGCCAGCCACATATGAATAACTGATGTAGAAAATATATACATCAAAGTGTAAAGGCCTTACCTTCGGAATCAGGTGTAGCAAAATATTGTATATACCCCAATAATAACAACCCAAAAGCTATTAGTTTCATACTTCCTTGAAAATTATTATCAATTTGTTTAATTTTCAGGAACAGAAGCACTCTTGAATACACACTGTATAGCTGCATCACCGAAGAATAAAATAAATTGTGTGAGACTTACAAGGCAGAAGAATAAAATAAATTGTGTGAGACTCACAAGGCTTAAAGAGTAAACTGAGAATACAGAGATTGAGGAATCTTCATAAATTCCTGCCAAAATTGAAAGGAAGTGTTTTAACCCAAACAAGGCAAGAATCTCCTTAAAAGAACATTCAGACTGTTTGGGATTCTTTCTAGAGAGAAAGATTTTATTTTTGTTGCAAACCATTTTTGATTTCTTGCATATAAAAAACATGTGATCAGTCACCTGACTGTATGAGTCTTGCAGCGGTCACTAAACCTAACCGGATTTCTATAGTTACACTCTAATCGATTGCCTGTACAAATATGGGGTGGTCCAAAAGACCTTAAACTGTCTAAAAGGTTGTCCTTAAATATGAAAAGTATGTTACTATTGAAATAAAGGTTGTCTTAAAGAAATAAATGTAAATTCTAAACCATTACTGGAGAAGTTAGAAGCTCAAAAAAAAAAGCCCAAAATGATTTAGGGGAATAAACTGAGCAAAAGGAAAAACAGAGGCAGACAAGCTGTCCTCTTCTCTTTGCAGTTACGTAGCAGCTTCTCAAAGTTCACACCCTGTTCTGAATACTACTTGCGAAGAACCTCAAGACGCGCAAAGCAAACTCTTCTCTGAATTCTCTCTTGATTTCCGAGAAATTTTAGCTCTGCAGATTGCAGACAGAAACCTCTGCTGTTCTGCAGGGTGTTTGAGCTAACAGCAAAGCTTCATCCATCCCTCCAATGGTGATGCCTCTTCTCCCCAAGTCCCAACATAAACCTCCCCAACTCAAAGAACCATTAAATTGAGAAGAAATAGAATAAATTCACCAGATGACACAGGCAGGTGATTGAAGCAAGCAGGCAGAGAAGAGGGTAGAAGAAAACAGATTCAGAAGTCAACCATGCTTGCTGTTGCTGTACTACCACATATGGCAAGAACTTACCAAGAAGAGAGGGAGAGAAGGACTGTGTGCTGCTCCTAGCTTCCTAAAAACTTTCTTCTTTCGTGTGAGAGATTGGAGGAAGAAGAAGACCTGAGGTCTCAGCTCGGCAGTCAGAACTGAGCTCAGGCCTCAGAGACAAGTCATGGAGCTCAGCTGCTGACTGAAATCTTGTGTGAG
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| CDS seq | ATGAAACTAATAGCTTTTGGGTTGTTATTATTGGGGTATATACAATATTTTGCTACACCTGATTCCGAAGTCATAGCATTGTATGAAATAAGGACAATGCTCAATGACAGTCGCGGCGTACTGAATGGCTGGAATAATAATCAAGTTAGTCCCTGCTATTTTCCTTCCATCAGTTGTAATCAAGATCAAAAAGTCATTTCAATAACTTTGAGCTCATCAGGATTATCTGGATTCTTGTCACCCAGCATTGGAAAGCTACTATATTTACAACAGCTATTATTGAATGATAACAACATAACCGGAGGAATTCCACAAGAGTTAGGGAACCTATCAAGCTTAACAACACTAAAACTTGGAGGAAATAGCTTAAATGGTTCAATACCTGACTCTCTTGGCCGTCTTTCAAAACTCCAAAATCTGGACATGAGCAAAAATCTCTTAATCGGGAATATTCCAACTTCTTTGTCTAATCTCTCATCATTGAATGATATCAATCTAGCAGACAACAATCTGAGCGGTGAAATACCCAAACGGTTGCTTCAGGTGTCTCACTACAGTTATATAGGTAACCATTTGAATTGTGGCCAACACTTGATTTCTTGTGAAGGAAGCAATTTTAATACAGGTGGATCAAATAACTCCACACTCAAGGTGGTTCTTGCAAGCATTGCTGGAGCAATAACTCTCCTTGTTATTATAGTACTATTTCTGCTATGGTGGCAAAGAATGCGCCACCGATCTGAAATATACATTGATGTTCCAGGTCAACATGATCACAATCTAGAGTTTGGACAGATAAAGCGGTTCTCATGGCGAGAACTCCAAATTGCAACCAACAATTTCAATGAGCAAAATGTTCTTGGCAAGGGTGGTTTTGGTAAGGTGTACAAAGGAGTGCTTTCAGGTCCACACGGCAGAAAGGTTGCAGTTAAAAGACTGTTTGAAGTGGAAAAGCCTGAAGGGGAAATAGCTTTCCTGAGAGAAGTTGAATTGATAAGCATTGCTGTGCACAAGAACATATTAAGATTGATAGGATTCTGCACGACTCCAACAGAGCGACTCTTGGTCTACCCTTACATGGAGAATCTAAGTGTTGCTTCCCGTTTGAGAGATATCAAACTAAATGAACCAGCATTAGATTGGCCAACAAGAGTGCGAATTGCCCTTGGCGCTGCCCGTGGCTTGGAATACCTTCATGAGCACTGCAACCCCAAGATTATCCACCGCGATGTCAAGGCAGCCAATGTCCTGCTTGATGGAAACTTTGAAGCAGTGGTAGGAGACTTTGGGTTGGCGAAGATGATAGACAGAGAGAGGAATACAGTTACGACTGGGGTTCGCGGGACAATGGGCCATATAGCTCCTGAGTACCTGAAGACAGGAAGGCCATCAGTGAAGACAGACATATTTGGATATGGTGTAATGTTGTTAGAAATAGTGACAGGAGAGCGTGCAGTGTTCCCTGAATTCTCGGAAGGAGACAGTGAGATCATGCTCAATGATCAAGTGAAAAGGTTGGTGCAAGGAGGACGATTGACAGACATTGTGGACCACAACCTGGACAATGCATACGATTTGCAAGGTCTGGAGAAGATGATCCAAATAGCACTCCTCTGCACTCATATGGAGCCTCATCTTCGCCCTGCTATGTCAGAGGTTGTGCAGATGCTGGAAGGCAATGTTGTCCCAGCGGAGCAATGGGAGGAGTGGCAGGTGGCTGAACTTGCCCGGCGGCATCAGCATGAGATGAACCAACAGCGCAGGCTGTTCAGCTTCAGTGAGGAGTCTCTCAATATCCAGGAAGCCATTCAGCTATCCAGTGGCAGATAA
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| Protein seq | MKLIAFGLLLLGYIQYFATPDSEVIALYEIRTMLNDSRGVLNGWNNNQVSPCYFPSISCNQDQKVISITLSSSGLSGFLSPSIGKLLYLQQLLLNDNNITGGIPQELGNLSSLTTLKLGGNSLNGSIPDSLGRLSKLQNLDMSKNLLIGNIPTSLSNLSSLNDINLADNNLSGEIPKRLLQVSHYSYIGNHLNCGQHLISCEGSNFNTGGSNNSTLKVVLASIAGAITLLVIIVLFLLWWQRMRHRSEIYIDVPGQHDHNLEFGQIKRFSWRELQIATNNFNEQNVLGKGGFGKVYKGVLSGPHGRKVAVKRLFEVEKPEGEIAFLREVELISIAVHKNILRLIGFCTTPTERLLVYPYMENLSVASRLRDIKLNEPALDWPTRVRIALGAARGLEYLHEHCNPKIIHRDVKAANVLLDGNFEAVVGDFGLAKMIDRERNTVTTGVRGTMGHIAPEYLKTGRPSVKTDIFGYGVMLLEIVTGERAVFPEFSEGDSEIMLNDQVKRLVQGGRLTDIVDHNLDNAYDLQGLEKMIQIALLCTHMEPHLRPAMSEVVQMLEGNVVPAEQWEEWQVAELARRHQHEMNQQRRLFSFSEESLNIQEAIQLSSGR |
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| Function | LRR receptor kinase SERK2 [UniProtKB/Swiss-Prot:Q6K4T4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0019310 | OsARC_11g0019310.02 | Chr11 | 22878516 | 22884027 | - | NAM | ||
| CDS seq | ATGAAACTAATAGCTTTTGGGTTGTTATTATTGGGGTATATACAATATTTTGCTACACCTGATTCCGAAGTCATAGCATTGTATGAAATAAGGACAATGCTCAATGACAGTCGCGGCGTACTGAATGGCTGGAATAATAATCAAGTTAGTCCCTGCTATTTTCCTTCCATCAGTTGTAATCAAGATCAAAAAGTCATTTCAATAACTTTGAGCTCATCAGGATTATCTGGATTCTTGTCACCCAGCATTGGAAAGCTACTATATTTACAACAGCTATTATTGAATGATAACAACATAACCGGAGGAATTCCACAAGAGTTAGGGAACCTATCAAGCTTAACAACACTAAAACTTGGAGGAAATAGCTTAAATGGTTCAATACCTGACTCTCTTGGCCGTCTTTCAAAACTCCAAAATCTCAATCTAGCAGACAACAATCTGAGCGGTGGATCAAATAACTCCACACTCAAGGTGGTTCTTGCAAGCATTGCTGGAGCAATAACTCTCCTTGTTATTATAGTACTATTTCTGCTATGGTGGCAAAGAATGCGCCACCGATCTGAAATATACATTGATGTTCCAGGTCAACATGATCACAATCTAGAGTTTGGACAGATAAAGCGGTTCTCATGGCGAGAACTCCAAATTGCAACCAACAATTTCAATGAGCAAAATGTTCTTGGCAAGGGTGGTTTTGGTAAGGTGTACAAAGGAGTGCTTTCAGGTCCACACGGCAGAAAGGTTGCAGTTAAAAGACTGTTTGAAGTGGAAAAGCCTGAAGGGGAAATAGCTTTCCTGAGAGAAGTTGAATTGATAAGCATTGCTGTGCACAAGAACATATTAAGATTGATAGGATTCTGCACGACTCCAACAGAGCGACTCTTGGTCTACCCTTACATGGAGAATCTAAGTGTTGCTTCCCGTTTGAGAGATATCAAACTAAATGAACCAGCATTAGATTGGCCAACAAGAGTGCGAATTGCCCTTGGCGCTGCCCGTGGCTTGGAATACCTTCATGAGCACTGCAACCCCAAGATTATCCACCGCGATGTCAAGGCAGCCAATGTCCTGCTTGATGGAAACTTTGAAGCAGTGGTAGGAGACTTTGGGTTGGCGAAGATGATAGACAGAGAGAGGAATACAGTTACGACTGGGGTTCGCGGGACAATGGGCCATATAGCTCCTGAGTACCTGAAGACAGGAAGGCCATCAGTGAAGACAGACATATTTGGATATGGTGTAATGTTGTTAGAAATAGTGACAGGAGAGCGTGCAGTGTTCCCTGAATTCTCGGAAGGAGACAGTGAGATCATGCTCAATGATCAAGTGAAAAGGTTGGTGCAAGGAGGACGATTGACAGACATTGTGGACCACAACCTGGACAATGCATACGATTTGCAAGGTCTGGAGAAGATGATCCAAATAGCACTCCTCTGCACTCATATGGAGCCTCATCTTCGCCCTGCTATGTCAGAGGTTGTGCAGATGCTGGAAGGCAATGTTGTCCCAGCGGAGCAATGGGAGGAGTGGCAGGTGGCTGAACTTGCCCGGCGGCATCAGCATGAGATGAACCAACAGCGCAGGCTGTTCAGCTTCAGTGAGGAGTCTCTCAATATCCAGGAAGCCATTCAGCTATCCAGTGGCAGATAA
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| Protein seq | MKLIAFGLLLLGYIQYFATPDSEVIALYEIRTMLNDSRGVLNGWNNNQVSPCYFPSISCNQDQKVISITLSSSGLSGFLSPSIGKLLYLQQLLLNDNNITGGIPQELGNLSSLTTLKLGGNSLNGSIPDSLGRLSKLQNLNLADNNLSGGSNNSTLKVVLASIAGAITLLVIIVLFLLWWQRMRHRSEIYIDVPGQHDHNLEFGQIKRFSWRELQIATNNFNEQNVLGKGGFGKVYKGVLSGPHGRKVAVKRLFEVEKPEGEIAFLREVELISIAVHKNILRLIGFCTTPTERLLVYPYMENLSVASRLRDIKLNEPALDWPTRVRIALGAARGLEYLHEHCNPKIIHRDVKAANVLLDGNFEAVVGDFGLAKMIDRERNTVTTGVRGTMGHIAPEYLKTGRPSVKTDIFGYGVMLLEIVTGERAVFPEFSEGDSEIMLNDQVKRLVQGGRLTDIVDHNLDNAYDLQGLEKMIQIALLCTHMEPHLRPAMSEVVQMLEGNVVPAEQWEEWQVAELARRHQHEMNQQRRLFSFSEESLNIQEAIQLSSGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0019310 | OsARC_11g0019310.01 | Chr11 | 22878516 | 22884038 | - | NAM | ||
| CDS seq | ATGAAACTAATAGCTTTTGGGTTGTTATTATTGGGGTATATACAATATTTTGCTACACCTGATTCCGAAGTCATAGCATTGTATGAAATAAGGACAATGCTCAATGACAGTCGCGGCGTACTGAATGGCTGGAATAATAATCAAGTTAGTCCCTGCTATTTTCCTTCCATCAGTTGTAATCAAGATCAAAAAGTCATTTCAATAACTTTGAGCTCATCAGGATTATCTGGATTCTTGTCACCCAGCATTGGAAAGCTACTATATTTACAACAGCTATTATTGAATGATAACAACATAACCGGAGGAATTCCACAAGAGTTAGGGAACCTATCAAGCTTAACAACACTAAAACTTGGAGGAAATAGCTTAAATGGTTCAATACCTGACTCTCTTGGCCGTCTTTCAAAACTCCAAAATCTGGACATGAGCAAAAATCTCTTAATCGGGAATATTCCAACTTCTTTGTCTAATCTCTCATCATTGAATGATATCAATCTAGCAGACAACAATCTGAGCGGTGAAATACCCAAACGGTTGCTTCAGGTGTCTCACTACAGTTATATAGGTAACCATTTGAATTGTGGCCAACACTTGATTTCTTGTGAAGGAAGCAATTTTAATACAGGTGGATCAAATAACTCCACACTCAAGGTGGTTCTTGCAAGCATTGCTGGAGCAATAACTCTCCTTGTTATTATAGTACTATTTCTGCTATGGTGGCAAAGAATGCGCCACCGATCTGAAATATACATTGATGTTCCAGGTCAACATGATCACAATCTAGAGTTTGGACAGATAAAGCGGTTCTCATGGCGAGAACTCCAAATTGCAACCAACAATTTCAATGAGCAAAATGTTCTTGGCAAGGGTGGTTTTGGTAAGGTGTACAAAGGAGTGCTTTCAGGTCCACACGGCAGAAAGGTTGCAGTTAAAAGACTGTTTGAAGTGGAAAAGCCTGAAGGGGAAATAGCTTTCCTGAGAGAAGTTGAATTGATAAGCATTGCTGTGCACAAGAACATATTAAGATTGATAGGATTCTGCACGACTCCAACAGAGCGACTCTTGGTCTACCCTTACATGGAGAATCTAAGTGTTGCTTCCCGTTTGAGAGATATCAAACTAAATGAACCAGCATTAGATTGGCCAACAAGAGTGCGAATTGCCCTTGGCGCTGCCCGTGGCTTGGAATACCTTCATGAGCACTGCAACCCCAAGATTATCCACCGCGATGTCAAGGCAGCCAATGTCCTGCTTGATGGAAACTTTGAAGCAGTGGTAGGAGACTTTGGGTTGGCGAAGATGATAGACAGAGAGAGGAATACAGTTACGACTGGGGTTCGCGGGACAATGGGCCATATAGCTCCTGAGTACCTGAAGACAGGAAGGCCATCAGTGAAGACAGACATATTTGGATATGGTGTAATGTTGTTAGAAATAGTGACAGGAGAGCGTGCAGTGTTCCCTGAATTCTCGGAAGGAGACAGTGAGATCATGCTCAATGATCAAGTGAAAAGGTTGGTGCAAGGAGGACGATTGACAGACATTGTGGACCACAACCTGGACAATGCATACGATTTGCAAGGTCTGGAGAAGATGATCCAAATAGCACTCCTCTGCACTCATATGGAGCCTCATCTTCGCCCTGCTATGTCAGAGGTTGTGCAGATGCTGGAAGGCAATGTTGTCCCAGCGGAGCAATGGGAGGAGTGGCAGGTGGCTGAACTTGCCCGGCGGCATCAGCATGAGATGAACCAACAGCGCAGGCTGTTCAGCTTCAGTGAGGAGTCTCTCAATATCCAGGAAGCCATTCAGCTATCCAGTGGCAGATAA
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| Protein seq | MKLIAFGLLLLGYIQYFATPDSEVIALYEIRTMLNDSRGVLNGWNNNQVSPCYFPSISCNQDQKVISITLSSSGLSGFLSPSIGKLLYLQQLLLNDNNITGGIPQELGNLSSLTTLKLGGNSLNGSIPDSLGRLSKLQNLDMSKNLLIGNIPTSLSNLSSLNDINLADNNLSGEIPKRLLQVSHYSYIGNHLNCGQHLISCEGSNFNTGGSNNSTLKVVLASIAGAITLLVIIVLFLLWWQRMRHRSEIYIDVPGQHDHNLEFGQIKRFSWRELQIATNNFNEQNVLGKGGFGKVYKGVLSGPHGRKVAVKRLFEVEKPEGEIAFLREVELISIAVHKNILRLIGFCTTPTERLLVYPYMENLSVASRLRDIKLNEPALDWPTRVRIALGAARGLEYLHEHCNPKIIHRDVKAANVLLDGNFEAVVGDFGLAKMIDRERNTVTTGVRGTMGHIAPEYLKTGRPSVKTDIFGYGVMLLEIVTGERAVFPEFSEGDSEIMLNDQVKRLVQGGRLTDIVDHNLDNAYDLQGLEKMIQIALLCTHMEPHLRPAMSEVVQMLEGNVVPAEQWEEWQVAELARRHQHEMNQQRRLFSFSEESLNIQEAIQLSSGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0019310 | OsARC_11g0019310.03 | Chr11 | 22878595 | 22884059 | - | IsoSeq | ||
| CDS seq | ATGAGCTTCACTTGTTCCCCAAGAAAGGGTGAAGGAGCGAGGAGTCTCTCAATATCCAGGAAGACATTCAGCTATCCGGTGGCAGATAACTGGAAGATCATACAATTGTATCACATGAGCTTCACTTGTTTCCCAAGAAAGGGTGAAGGGAGACAACAGTACTCG |
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| Protein seq | MSFTCSPRKGEGARSLSISRKTFSYPVADNWKIIQLYHMSFTCFPRKGEGRQQYS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr11 | 22881771 | 22882757 | - | OsARC_11g0019310.02,OsARC_11g0019310.01 | OsARC_11g0019310.03,OsARC_11g0019310.01,OsARC_11g0019310.02 | All |
| SE | Chr11 | 22881200 | 22881451 | - | OsARC_11g0019310.01,OsARC_11g0019310.03 | OsARC_11g0019310.03,OsARC_11g0019310.01,OsARC_11g0019310.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.496542 | 0.529654 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0607200 | RBH | 12.302835 | 13.219761 | 2.563136 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39370 | RBH | 7.222333 | 8.053438 | 0.675723 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0607200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019850 | RBH | 2.710535 | 27.265099 | 5.961030 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0020030 | RBH | 1.706218 | 2.155773 | 2.451826 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019780 | RBH | 9.873482 | 6.320384 | 7.612745 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019450 | RBH | 0.510856 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019870 | RBH | 28.365023 | 7.627100 | 23.418806 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0357000 | RBH | 37.660355 | 65.6938325 | 3.09435 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020330 | RBH | 2.663028 | 0.613925 | 1.198162 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0373000 | RBH | 17.605762 | 19.1879135 | 3.5704405 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020110 | RBH | 4.275896 | 0.559696 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020340 | RBH | 3.521118 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019800 | RBH | 17.488962 | 18.055319 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0019580 | RBH | 4.565073 | 0.0 | 1.065339 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019690 | RBH | 1.786894 | 13.973157 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019650 | RBH | 6.285913 | 1.387319 | 3.326286 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020030 | RBH | 11.613371 | 21.856640 | 7.540405 |
