Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_11g0018890 | OGI:11066590 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr11:22323013-22327735 | ||||||||
| Gene Symbol | Pb1, - | ||||||||||
| DNA seq | AATGGCGGAAAACGGAGGCTGGCAGTATATATTCACATCCCACCACCACGGCACCACCCCAGCGAGCTAGCCTTCCCCCGCGAGGCAGCAAGACCATTATCCGAGCCATCAGTTGGGGCGCAGAGTTGGGGGGCAGACTTACAAGGCAGGTGGCAAGTGAAATACATCTCAAGATTTGGATGGAGGGTTAGCACCAGAAGAATAGAAGCTCAAGATTTGGATGGAGGGCTGGCACCAGAAGAATTGAAGCTTGATGGAAACTTTGGTCATCTGGAGAGTTTTGGGCTTCAGCAGTCACTCTTCTCTGCTGTATTAAAGTCACTTCTTTCTGCTGACTTGATCACGTTTGTGTTGAGGATAGTTTTGCTGAAGGGTCACTTCTGGACATAGGTCCTATTGATCGTAATTTCGGTTTCGGTCCCTTTTTTTTTTCCTTTGTTTAGTTTCAATACTTGTAAAGCTTGGGCTTTCATGCCCTAGTTCCAAAAAAAAAAAAAACATGACTGAGCTCGCTTCTGGCGCCGTGAGCTCACTGCTGGTGGTCATCCACAACGAGGCGGCTCTTCTCGGCGGCGTCCGGGACGACGTGCAGTTCATCAAGGAGGAGATGGAGAGCATGAACAGCTTCTTGGGGCACCTGGCCAGGAGCGCACCGCAGGGCGGCGAGCACGACGAGCAGGTCCGTACCTGGATGAACCAGGTGCGGCTCCTCGCCCAGGATTGCAACAATTGCATCGACCTCTACCTGTACTCTGGGAATCCAGAGATTCACCGCGCCAAGGGCAGACTCCGGCGACACCTCTGGTGGGCTTACTGGTCCCTGCGCAAGATGGTCGCACGGCGCCGTGCAGCTGTCCAGCTACGCCAGCTCAAGGACCGGGCGCGCGACGTCGGTGAGCGACGGCAAAGGTACGGCGTGGAGGTTCCAGCCACGACCAAGGCTGGTACACCTGATGCAGCAAGTGGCTATGCTGCTGGAGATGATGAAGACGAAGAAGACTATGAACATCAACTTGCGGTGGCAACTGCAGGCTATCGTTCTGCTCGAAGGGCCGTCTATGAGCCCCCCGCTCTAGAAGACTACGTGAACGAAAAGCTATTGGAGTGGGCAGAAGAAATTCCTACTAGAGCCATCGAGACGTTGTCCATCGCCATCGTGGCACCGGATACAGATAACAAGGAAGCCCTTGATCTTGCACATGAAACTTTGGTTGCTCCAGGCTACTACTACCGTCTCAGTATCATGGTCGACGTACCGGCGTTGCACGCCTATTTTTTACCGCTACGACCTAAGGAGGTTCTCTACTACATCTTGCGGGAGCTCGGGCATGGTGAAGGGGCTGGGTCCCAGAAGCAGGCCACAGATCAAGGTGACCCTTGGCAAGAATACTACAATATTTACCGTGGCAAAAAAAGGGTGCTTCGTAAAATCAAAAGGAATATAGAAAAGATGAATATTTACAAAAAGCTCGACAAGATCAAGAGTGATATTCAACACGAACAACAGAAGAGCGACAAGCAGCTGCCGCTTCGGCTACAAAAGAAGGGTGTGGATCGGGTGGACCTACATGTACTCTTTCAGCAGTTGTTGCTCCAGTCTCAACAAGACCAAGTGAAGAACAAAGCAGTAGACAAATTTAAATTACTGGAGTGGAACGACAACGACATCATGAAAATAGCCAGGAAGCTTAAGAAGCATATGGAAACAGATGAAGATACCAAGGAGGTTCACGAGCAAACTGAAGTAGAAGATGAAACAACCAATCAGGGAAGAGGGGGAAAAAGTATTGAGGAGGAGCAGCAGCAGCACGAGAAGCAGAAGGAGAAAAGAGAAGAGAGGAAAGAGGTGGAGCTGCACGAGAAGGAGAAAGAAGAAGAGAGGAAGGAGGATGAGGAGGAGCACGATAAGAAAAAGAAGAGAGAAGGAAGAGAAGTACAGCGCAACGAGGAAGAAGAAAAGGACAACGATGATAATAATGATGACGATGATAATAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGAAGATGAAGATGAAGAAGACCCGATTCATCTTCATGAAGCTCAATACGCACAAATCTTACAAGAAGTGTTCCCAAATATCGCCAGCAGAAAGGCCCAACAGCAAGACAAATCGGAGGCCAAGCAAGTTACAAAGACTGCGACGACTACATTGGATGAGGAACGAGTCAAACAAATGATCAACGAGGCAAAAGAAGATGTCTTTAGGGAGTTGCGGGCAGGCAAACCTGATAAGAATCAAGAAACATGTGAACCTGATGTTCCACCTGATAAGAATCAAGGAACAGATGAACATGCAGGTGTTCTGGATCCAAATGGAGAGGCCTACTTTACAGAAATAGAGCAGAAGATTGACGAAATCAAGCAGGAATTTAAAAAACAGCTGAAAATCAAAGGGATCGTGGACAAGATCAAACATCGCTTGATCGAGTACAAGATCAAACATGCCTTACCGAATGAGTGCCCCCTCATTATCCTAAAATTTGATGATATGATGGATGGATTAGAATGGGAGGAGTTCAGAAAGGCTTTGAGCCTGTTAGAATGTAGCGCCGATGCATTGATCTTCACCACAGAGAGCATTGAACAGGCTAGAAGATATAGCTATCCACCACGAGAACCTATAGACTATTCTCTTGCTGGCCTCTACCATCGTACGGTGCTTGAGCTTACTAGCAAGCATAAGAATGAAGACAACTGTAGCCCCCAGATTTTTCGTGACATTTTGGAGGAGTGTGAGGAGAATGAATTCTGCATGAAGATTTTCACTCGTGCTCTATATGCTAACCCCAAGAGGAGCAACAAAGAGTTAAGCAAGCTGCACAGCACCCTGCAGGATTCACAAAAATCATCCGATGCCATAGCTAAGAAGATGTTCATGTACTCTTACAATGATCTGCCTAAAGAATACAAGTCCTGCTTGTTGTACCTAGCAATCTTCCCCAAAGGTGAGAGGATTAGGCGGTCAACCTTGGTTGGACGGTGGGTTGCAGAAGGGTTCACACTCAAGGAAGATTGGCCCAGTTCTGTGCGTCAGGCAAATCGATGTTTTGATGCCCTCATCCGTCGGTATCTTGTTTGTCCTCTTGATATTGGTGGCACAGGAAAGGTCAAGAGCTGTGTGGTACATGATCCAGTTCATGGGTTCATTACCAAAATTGCCAGAAAACAACATATTGTGGAGACACGCCTATCACATCATTTGGCTCGCCACTTCTCCATTTTCAATGATCTTCGACTCCGCAGCTCTGATGGAATTCACACATTCTTCCAAAGCCTCTCACGATCATCCCGAGTATCCGTACTGAAGGTGCTAGATCTAGAAGGTTGTCAGTGCTTTGGTGGTAAGAACCAGCGGTACCTCAAGGACATCTGCAGCAAGATGTTACTGCTCAAGTATCTAGGCTTAAAGGGAACAGATATTACCCAGTTGCCCAGAGAAATCAACTGCCTCCGTGAACTAGAGGTATTGGATATCCGAGAAACAATGGTGCCAGCAAATGCAACGGTTGATGTCCTGCTCTTGAAGCTGAAGCGTCTACTTGCTGGTCACATTGACCCAAGTCTAAGAAATTTTGGCACTAGCGTTCATATTCCTCACAGGATAGACAAGATGGTAAACATAGAGGTGCTATCTAATGTCAAGGCCCAGCGACGTGATGATTTGGAAGATATTGGAAAGCTATGGCAGCTGAGGAAGCTAGGTGTGGTTATTGATGATAAGAAAAGTCACCTTGGGAATTTGCTTAAAGCAATAAGTGACCTACATGAGTGCCTGCGTTCTCTATCAATCACTATTCCCGCAACCACACTCAACGGTACTCTTTCAAGCCCAGAGTTACCAGATGATATTGGCTCTCGCATAGAACACCATCCCAAGATTCTTGAGAGTCTAAGCATTAGAGGAGCCAGGCATCTTTTTCCATTGTTGACCAGAGGTGGCAATAACAAGCTTGCCAAGGTAACTCTAAGTGGCACCCCACTGAACCAAGATGATCTGAAAGTCCTTGCCAAGCTTCCCAAGTTACAGTGTGTTAAGCTCCGACACATTTCATGCACCGAGAGCGTGCTCATCTTCGAGCAAGCTGATTTTGAATGTCTCAAGTACCTTCTTATTGAGGGCTCGAACTTGACTAATATCATTTTTGAGGATGGAGCGGCCTGTGAGCTCGAGAAGATGGTTTTATCTTCCACCGGTATAGAGTCTATTTCTGGAGTTGATGAGCTTCCAAATTTCGAAGAGCTTGAGTTGAACAACAACAGCTGTGGAAGGTTGCTATCATCATTTCACAATGCCAAACAGATAGCCAAGCTCACTCTTCGTGGTACATTGCTGAAGCAAGATGATCTACAAATCATCACCAAGGAACTAAATATACGCTGCCTAATGCTCTTGGACAAATCTCTTGACGTAAGTCAGAACCAGATTACCTTCGAAAAAGAAGAGTTCATATGGCTCAACCTTCTTATGGTTGACTGCTCTGCCATCACCAAGATTGACTTCAACAACGGATCAGCTCCTAGGCTTGAGAAGATCGTCTGGTCACATTTCACATCTCTCTCTGGCATCGACAACCTTCCTCGATTGAAGGAGCTCGAGTTCAATGGAAAAGTTGTTCCTAAAGAGGTGAAAGAAGCCATTGAAAACAATAAAAGAATAAATCTTAAATGTAATGAACCATGA
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| CDS seq | ATGACTGAGCTCGCTTCTGGCGCCGTGAGCTCACTGCTGGTGGTCATCCACAACGAGGCGGCTCTTCTCGGCGGCGTCCGGGACGACGTGCAGTTCATCAAGGAGGAGATGGAGAGCATGAACAGCTTCTTGGGGCACCTGGCCAGGAGCGCACCGCAGGGCGGCGAGCACGACGAGCAGGTCCGTACCTGGATGAACCAGGTGCGGCTCCTCGCCCAGGATTGCAACAATTGCATCGACCTCTACCTGTACTCTGGGAATCCAGAGATTCACCGCGCCAAGGGCAGACTCCGGCGACACCTCTGGTGGGCTTACTGGTCCCTGCGCAAGATGGTCGCACGGCGCCGTGCAGCTGTCCAGCTACGCCAGCTCAAGGACCGGGCGCGCGACGTCGGTGAGCGACGGCAAAGGTACGGCGTGGAGGTTCCAGCCACGACCAAGGCTGGTACACCTGATGCAGCAAGTGGCTATGCTGCTGGAGATGATGAAGACGAAGAAGACTATGAACATCAACTTGCGGTGGCAACTGCAGGCTATCGTTCTGCTCGAAGGGCCGTCTATGAGCCCCCCGCTCTAGAAGACTACGTGAACGAAAAGCTATTGGAGTGGGCAGAAGAAATTCCTACTAGAGCCATCGAGACGTTGTCCATCGCCATCGTGGCACCGGATACAGATAACAAGGAAGCCCTTGATCTTGCACATGAAACTTTGGTTGCTCCAGGCTACTACTACCGTCTCAGTATCATGGTCGACGTACCGGCGTTGCACGCCTATTTTTTACCGCTACGACCTAAGGAGGTTCTCTACTACATCTTGCGGGAGCTCGGGCATGGTGAAGGGGCTGGGTCCCAGAAGCAGGCCACAGATCAAGGTGACCCTTGGCAAGAATACTACAATATTTACCGTGGCAAAAAAAGGGTGCTTCGTAAAATCAAAAGGAATATAGAAAAGATGAATATTTACAAAAAGCTCGACAAGATCAAGAGTGATATTCAACACGAACAACAGAAGAGCGACAAGCAGCTGCCGCTTCGGCTACAAAAGAAGGGTGTGGATCGGGTGGACCTACATGTACTCTTTCAGCAGTTGTTGCTCCAGTCTCAACAAGACCAAGTGAAGAACAAAGCAGTAGACAAATTTAAATTACTGGAGTGGAACGACAACGACATCATGAAAATAGCCAGGAAGCTTAAGAAGCATATGGAAACAGATGAAGATACCAAGGAGGTTCACGAGCAAACTGAAGTAGAAGATGAAACAACCAATCAGGGAAGAGGGGGAAAAAGTATTGAGGAGGAGCAGCAGCAGCACGAGAAGCAGAAGGAGAAAAGAGAAGAGAGGAAAGAGGCAAAAGAAGATGTCTTTAGGGAGTTGCGGGCAGGCAAACCTGATAAGAATCAAGAAACATGTGAACCTGATGTTCCACCTGATAAGAATCAAGGAACAGATGAACATGCAGGTGTTCTGGATCCAAATGGAGAGGCCTACTTTACAGAAATAGAGCAGAAGATTGACGAAATCAAGCAGGAATTTAAAAAACAGCTGAAAATCAAAGGGATCGTGGACAAGATCAAACATCGCTTGATCGAGTACAAGATCAAACATGCCTTACCGAATGAGTGCCCCCTCATTATCCTAAAATTTGATGATATGATGGATGGATTAGAATGGGAGGAGTTCAGAAAGGCTTTGAGCCTGTTAGAATGTAGCGCCGATGCATTGATCTTCACCACAGAGAGCATTGAACAGGCTAGAAGATATAGCTATCCACCACGAGAACCTATAGACTATTCTCTTGCTGGCCTCTACCATCGTACGGTGCTTGAGCTTACTAGCAAGCATAAGAATGAAGACAACTGTAGCCCCCAGATTTTTCGTGACATTTTGGAGGAGTGTGAGGAGAATGAATTCTGCATGAAGATTTTCACTCGTGCTCTATATGCTAACCCCAAGAGGAGCAACAAAGAGTTAAGCAAGCTGCACAGCACCCTGCAGGATTCACAAAAATCATCCGATGCCATAGCTAAGAAGATGTTCATGTACTCTTACAATGATCTGCCTAAAGAATACAAGTCCTGCTTGTTGTACCTAGCAATCTTCCCCAAAGGTGAGAGGATTAGGCGGTCAACCTTGGTTGGACGGTGGGTTGCAGAAGGGTTCACACTCAAGGAAGATTGGCCCAGTTCTGTGCGTCAGGCAAATCGATGTTTTGATGCCCTCATCCGTCGGTATCTTGTTTGTCCTCTTGATATTGGTGGCACAGGAAAGGTCAAGAGCTGTGTGGTACATGATCCAGTTCATGGGTTCATTACCAAAATTGCCAGAAAACAACATATTGTGGAGACACGCCTATCACATCATTTGGCTCGCCACTTCTCCATTTTCAATGATCTTCGACTCCGCAGCTCTGATGGAATTCACACATTCTTCCAAAGCCTCTCACGATCATCCCGAGTATCCGTACTGAAGGTGCTAGATCTAGAAGGTTGTCAGTGCTTTGGTGGTAAGAACCAGCGGTACCTCAAGGACATCTGCAGCAAGATGTTACTGCTCAAGTATCTAGGCTTAAAGGGAACAGATATTACCCAGTTGCCCAGAGAAATCAACTGCCTCCGTGAACTAGAGGTATTGGATATCCGAGAAACAATGGTGCCAGCAAATGCAACGGTTGATGTCCTGCTCTTGAAGCTGAAGCGTCTACTTGCTGGTCACATTGACCCAAGTCTAAGAAATTTTGGCACTAGCGTTCATATTCCTCACAGGATAGACAAGATGGTAAACATAGAGGTGCTATCTAATGTCAAGGCCCAGCGACGTGATGATTTGGAAGATATTGGAAAGCTATGGCAGCTGAGGAAGCTAGGTGTGGTTATTGATGATAAGAAAAGTCACCTTGGGAATTTGCTTAAAGCAATAAGTGACCTACATGAGTGCCTGCGTTCTCTATCAATCACTATTCCCGCAACCACACTCAACGGTACTCTTTCAAGCCCAGAGTTACCAGATGATATTGGCTCTCGCATAGAACACCATCCCAAGATTCTTGAGAGTCTAAGCATTAGAGGAGCCAGGCATCTTTTTCCATTGTTGACCAGAGGTGGCAATAACAAGCTTGCCAAGGTAACTCTAAGTGGCACCCCACTGAACCAAGATGATCTGAAAGTCCTTGCCAAGCTTCCCAAGTTACAGTGTGTTAAGCTCCGACACATTTCATGCACCGAGAGCGTGCTCATCTTCGAGCAAGCTGATTTTGAATGTCTCAAGTACCTTCTTATTGAGGGCTCGAACTTGACTAATATCATTTTTGAGGATGGAGCGGCCTGTGAGCTCGAGAAGATGGTTTTATCTTCCACCGGTATAGAGTCTATTTCTGGAGTTGATGAGCTTCCAAATTTCGAAGAGCTTGAGTTGAACAACAACAGCTGTGGAAGGTTGCTATCATCATTTCACAATGCCAAACAGATAGCCAAGCTCACTCTTCGTGGTACATTGCTGAAGCAAGATGATCTACAAATCATCACCAAGGAACTAAATATACGCTGCCTAATGCTCTTGGACAAATCTCTTGACGTAAGTCAGAACCAGATTACCTTCGAAAAAGAAGAGTTCATATGGCTCAACCTTCTTATGGTTGACTGCTCTGCCATCACCAAGATTGACTTCAACAACGGATCAGCTCCTAGGCTTGAGAAGATCGTCTGGTCACATTTCACATCTCTCTCTGGCATCGACAACCTTCCTCGATTGAAGGAGCTCGAGTTCAATGGAAAAGTTGTTCCTAAAGAGGTGAAAGAAGCCATTGAAAACAATAAAAGAATAAATCTTAAATGTAATGAACCATGA
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| Protein seq | MTELASGAVSSLLVVIHNEAALLGGVRDDVQFIKEEMESMNSFLGHLARSAPQGGEHDEQVRTWMNQVRLLAQDCNNCIDLYLYSGNPEIHRAKGRLRRHLWWAYWSLRKMVARRRAAVQLRQLKDRARDVGERRQRYGVEVPATTKAGTPDAASGYAAGDDEDEEDYEHQLAVATAGYRSARRAVYEPPALEDYVNEKLLEWAEEIPTRAIETLSIAIVAPDTDNKEALDLAHETLVAPGYYYRLSIMVDVPALHAYFLPLRPKEVLYYILRELGHGEGAGSQKQATDQGDPWQEYYNIYRGKKRVLRKIKRNIEKMNIYKKLDKIKSDIQHEQQKSDKQLPLRLQKKGVDRVDLHVLFQQLLLQSQQDQVKNKAVDKFKLLEWNDNDIMKIARKLKKHMETDEDTKEVHEQTEVEDETTNQGRGGKSIEEEQQQHEKQKEKREERKEAKEDVFRELRAGKPDKNQETCEPDVPPDKNQGTDEHAGVLDPNGEAYFTEIEQKIDEIKQEFKKQLKIKGIVDKIKHRLIEYKIKHALPNECPLIILKFDDMMDGLEWEEFRKALSLLECSADALIFTTESIEQARRYSYPPREPIDYSLAGLYHRTVLELTSKHKNEDNCSPQIFRDILEECEENEFCMKIFTRALYANPKRSNKELSKLHSTLQDSQKSSDAIAKKMFMYSYNDLPKEYKSCLLYLAIFPKGERIRRSTLVGRWVAEGFTLKEDWPSSVRQANRCFDALIRRYLVCPLDIGGTGKVKSCVVHDPVHGFITKIARKQHIVETRLSHHLARHFSIFNDLRLRSSDGIHTFFQSLSRSSRVSVLKVLDLEGCQCFGGKNQRYLKDICSKMLLLKYLGLKGTDITQLPREINCLRELEVLDIRETMVPANATVDVLLLKLKRLLAGHIDPSLRNFGTSVHIPHRIDKMVNIEVLSNVKAQRRDDLEDIGKLWQLRKLGVVIDDKKSHLGNLLKAISDLHECLRSLSITIPATTLNGTLSSPELPDDIGSRIEHHPKILESLSIRGARHLFPLLTRGGNNKLAKVTLSGTPLNQDDLKVLAKLPKLQCVKLRHISCTESVLIFEQADFECLKYLLIEGSNLTNIIFEDGAACELEKMVLSSTGIESISGVDELPNFEELELNNNSCGRLLSSFHNAKQIAKLTLRGTLLKQDDLQIITKELNIRCLMLLDKSLDVSQNQITFEKEEFIWLNLLMVDCSAITKIDFNNGSAPRLEKIVWSHFTSLSGIDNLPRLKELEFNGKVVPKEVKEAIENNKRINLKCNEP |
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| Function | Disease resistance protein PIK6-NP [UniProtKB/Swiss-Prot:Q2QZF1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0018890 | OsARC_11g0018890.01 | Chr11 | 22323512 | 22327735 | + | NAM | ||
| CDS seq | ATGACTGAGCTCGCTTCTGGCGCCGTGAGCTCACTGCTGGTGGTCATCCACAACGAGGCGGCTCTTCTCGGCGGCGTCCGGGACGACGTGCAGTTCATCAAGGAGGAGATGGAGAGCATGAACAGCTTCTTGGGGCACCTGGCCAGGAGCGCACCGCAGGGCGGCGAGCACGACGAGCAGGTCCGTACCTGGATGAACCAGGTGCGGCTCCTCGCCCAGGATTGCAACAATTGCATCGACCTCTACCTGTACTCTGGGAATCCAGAGATTCACCGCGCCAAGGGCAGACTCCGGCGACACCTCTGGTGGGCTTACTGGTCCCTGCGCAAGATGGTCGCACGGCGCCGTGCAGCTGTCCAGCTACGCCAGCTCAAGGACCGGGCGCGCGACGTCGGTGAGCGACGGCAAAGGTACGGCGTGGAGGTTCCAGCCACGACCAAGGCTGGTACACCTGATGCAGCAAGTGGCTATGCTGCTGGAGATGATGAAGACGAAGAAGACTATGAACATCAACTTGCGGTGGCAACTGCAGGCTATCGTTCTGCTCGAAGGGCCGTCTATGAGCCCCCCGCTCTAGAAGACTACGTGAACGAAAAGCTATTGGAGTGGGCAGAAGAAATTCCTACTAGAGCCATCGAGACGTTGTCCATCGCCATCGTGGCACCGGATACAGATAACAAGGAAGCCCTTGATCTTGCACATGAAACTTTGGTTGCTCCAGGCTACTACTACCGTCTCAGTATCATGGTCGACGTACCGGCGTTGCACGCCTATTTTTTACCGCTACGACCTAAGGAGGTTCTCTACTACATCTTGCGGGAGCTCGGGCATGGTGAAGGGGCTGGGTCCCAGAAGCAGGCCACAGATCAAGGTGACCCTTGGCAAGAATACTACAATATTTACCGTGGCAAAAAAAGGGTGCTTCGTAAAATCAAAAGGAATATAGAAAAGATGAATATTTACAAAAAGCTCGACAAGATCAAGAGTGATATTCAACACGAACAACAGAAGAGCGACAAGCAGCTGCCGCTTCGGCTACAAAAGAAGGGTGTGGATCGGGTGGACCTACATGTACTCTTTCAGCAGTTGTTGCTCCAGTCTCAACAAGACCAAGTGAAGAACAAAGCAGTAGACAAATTTAAATTACTGGAGTGGAACGACAACGACATCATGAAAATAGCCAGGAAGCTTAAGAAGCATATGGAAACAGATGAAGATACCAAGGAGGTTCACGAGCAAACTGAAGTAGAAGATGAAACAACCAATCAGGGAAGAGGGGGAAAAAGTATTGAGGAGGAGCAGCAGCAGCACGAGAAGCAGAAGGAGAAAAGAGAAGAGAGGAAAGAGGCAAAAGAAGATGTCTTTAGGGAGTTGCGGGCAGGCAAACCTGATAAGAATCAAGAAACATGTGAACCTGATGTTCCACCTGATAAGAATCAAGGAACAGATGAACATGCAGGTGTTCTGGATCCAAATGGAGAGGCCTACTTTACAGAAATAGAGCAGAAGATTGACGAAATCAAGCAGGAATTTAAAAAACAGCTGAAAATCAAAGGGATCGTGGACAAGATCAAACATCGCTTGATCGAGTACAAGATCAAACATGCCTTACCGAATGAGTGCCCCCTCATTATCCTAAAATTTGATGATATGATGGATGGATTAGAATGGGAGGAGTTCAGAAAGGCTTTGAGCCTGTTAGAATGTAGCGCCGATGCATTGATCTTCACCACAGAGAGCATTGAACAGGCTAGAAGATATAGCTATCCACCACGAGAACCTATAGACTATTCTCTTGCTGGCCTCTACCATCGTACGGTGCTTGAGCTTACTAGCAAGCATAAGAATGAAGACAACTGTAGCCCCCAGATTTTTCGTGACATTTTGGAGGAGTGTGAGGAGAATGAATTCTGCATGAAGATTTTCACTCGTGCTCTATATGCTAACCCCAAGAGGAGCAACAAAGAGTTAAGCAAGCTGCACAGCACCCTGCAGGATTCACAAAAATCATCCGATGCCATAGCTAAGAAGATGTTCATGTACTCTTACAATGATCTGCCTAAAGAATACAAGTCCTGCTTGTTGTACCTAGCAATCTTCCCCAAAGGTGAGAGGATTAGGCGGTCAACCTTGGTTGGACGGTGGGTTGCAGAAGGGTTCACACTCAAGGAAGATTGGCCCAGTTCTGTGCGTCAGGCAAATCGATGTTTTGATGCCCTCATCCGTCGGTATCTTGTTTGTCCTCTTGATATTGGTGGCACAGGAAAGGTCAAGAGCTGTGTGGTACATGATCCAGTTCATGGGTTCATTACCAAAATTGCCAGAAAACAACATATTGTGGAGACACGCCTATCACATCATTTGGCTCGCCACTTCTCCATTTTCAATGATCTTCGACTCCGCAGCTCTGATGGAATTCACACATTCTTCCAAAGCCTCTCACGATCATCCCGAGTATCCGTACTGAAGGTGCTAGATCTAGAAGGTTGTCAGTGCTTTGGTGGTAAGAACCAGCGGTACCTCAAGGACATCTGCAGCAAGATGTTACTGCTCAAGTATCTAGGCTTAAAGGGAACAGATATTACCCAGTTGCCCAGAGAAATCAACTGCCTCCGTGAACTAGAGGTATTGGATATCCGAGAAACAATGGTGCCAGCAAATGCAACGGTTGATGTCCTGCTCTTGAAGCTGAAGCGTCTACTTGCTGGTCACATTGACCCAAGTCTAAGAAATTTTGGCACTAGCGTTCATATTCCTCACAGGATAGACAAGATGGTAAACATAGAGGTGCTATCTAATGTCAAGGCCCAGCGACGTGATGATTTGGAAGATATTGGAAAGCTATGGCAGCTGAGGAAGCTAGGTGTGGTTATTGATGATAAGAAAAGTCACCTTGGGAATTTGCTTAAAGCAATAAGTGACCTACATGAGTGCCTGCGTTCTCTATCAATCACTATTCCCGCAACCACACTCAACGGTACTCTTTCAAGCCCAGAGTTACCAGATGATATTGGCTCTCGCATAGAACACCATCCCAAGATTCTTGAGAGTCTAAGCATTAGAGGAGCCAGGCATCTTTTTCCATTGTTGACCAGAGGTGGCAATAACAAGCTTGCCAAGGTAACTCTAAGTGGCACCCCACTGAACCAAGATGATCTGAAAGTCCTTGCCAAGCTTCCCAAGTTACAGTGTGTTAAGCTCCGACACATTTCATGCACCGAGAGCGTGCTCATCTTCGAGCAAGCTGATTTTGAATGTCTCAAGTACCTTCTTATTGAGGGCTCGAACTTGACTAATATCATTTTTGAGGATGGAGCGGCCTGTGAGCTCGAGAAGATGGTTTTATCTTCCACCGGTATAGAGTCTATTTCTGGAGTTGATGAGCTTCCAAATTTCGAAGAGCTTGAGTTGAACAACAACAGCTGTGGAAGGTTGCTATCATCATTTCACAATGCCAAACAGATAGCCAAGCTCACTCTTCGTGGTACATTGCTGAAGCAAGATGATCTACAAATCATCACCAAGGAACTAAATATACGCTGCCTAATGCTCTTGGACAAATCTCTTGACGTAAGTCAGAACCAGATTACCTTCGAAAAAGAAGAGTTCATATGGCTCAACCTTCTTATGGTTGACTGCTCTGCCATCACCAAGATTGACTTCAACAACGGATCAGCTCCTAGGCTTGAGAAGATCGTCTGGTCACATTTCACATCTCTCTCTGGCATCGACAACCTTCCTCGATTGAAGGAGCTCGAGTTCAATGGAAAAGTTGTTCCTAAAGAGGTGAAAGAAGCCATTGAAAACAATAAAAGAATAAATCTTAAATGTAATGAACCATGA
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| Protein seq | MTELASGAVSSLLVVIHNEAALLGGVRDDVQFIKEEMESMNSFLGHLARSAPQGGEHDEQVRTWMNQVRLLAQDCNNCIDLYLYSGNPEIHRAKGRLRRHLWWAYWSLRKMVARRRAAVQLRQLKDRARDVGERRQRYGVEVPATTKAGTPDAASGYAAGDDEDEEDYEHQLAVATAGYRSARRAVYEPPALEDYVNEKLLEWAEEIPTRAIETLSIAIVAPDTDNKEALDLAHETLVAPGYYYRLSIMVDVPALHAYFLPLRPKEVLYYILRELGHGEGAGSQKQATDQGDPWQEYYNIYRGKKRVLRKIKRNIEKMNIYKKLDKIKSDIQHEQQKSDKQLPLRLQKKGVDRVDLHVLFQQLLLQSQQDQVKNKAVDKFKLLEWNDNDIMKIARKLKKHMETDEDTKEVHEQTEVEDETTNQGRGGKSIEEEQQQHEKQKEKREERKEAKEDVFRELRAGKPDKNQETCEPDVPPDKNQGTDEHAGVLDPNGEAYFTEIEQKIDEIKQEFKKQLKIKGIVDKIKHRLIEYKIKHALPNECPLIILKFDDMMDGLEWEEFRKALSLLECSADALIFTTESIEQARRYSYPPREPIDYSLAGLYHRTVLELTSKHKNEDNCSPQIFRDILEECEENEFCMKIFTRALYANPKRSNKELSKLHSTLQDSQKSSDAIAKKMFMYSYNDLPKEYKSCLLYLAIFPKGERIRRSTLVGRWVAEGFTLKEDWPSSVRQANRCFDALIRRYLVCPLDIGGTGKVKSCVVHDPVHGFITKIARKQHIVETRLSHHLARHFSIFNDLRLRSSDGIHTFFQSLSRSSRVSVLKVLDLEGCQCFGGKNQRYLKDICSKMLLLKYLGLKGTDITQLPREINCLRELEVLDIRETMVPANATVDVLLLKLKRLLAGHIDPSLRNFGTSVHIPHRIDKMVNIEVLSNVKAQRRDDLEDIGKLWQLRKLGVVIDDKKSHLGNLLKAISDLHECLRSLSITIPATTLNGTLSSPELPDDIGSRIEHHPKILESLSIRGARHLFPLLTRGGNNKLAKVTLSGTPLNQDDLKVLAKLPKLQCVKLRHISCTESVLIFEQADFECLKYLLIEGSNLTNIIFEDGAACELEKMVLSSTGIESISGVDELPNFEELELNNNSCGRLLSSFHNAKQIAKLTLRGTLLKQDDLQIITKELNIRCLMLLDKSLDVSQNQITFEKEEFIWLNLLMVDCSAITKIDFNNGSAPRLEKIVWSHFTSLSGIDNLPRLKELEFNGKVVPKEVKEAIENNKRINLKCNEP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0018890 | OsARC_11g0018890.02 | Chr11 | 22323013 | 22325009 | + | IsoSeq | ||
| CDS seq | AATGGCGGAAAACGGAGGCTGGCAGTATATATTCACATCCCACCACCACGGCACCACCCCAGCGAGCTAGCCTTCCCCCGCGAGGCAGCAAGACCATTATCCGAGCCATCAGTTGGGGCGCAGAGTTGGGGGGCAGACTTACAAGGCAGGTGGCAAGTGAAATACATCTCAAGATTTGGATGGAGGGTTAGCACCAGAAGAATAGAAGCTCAAGATTTGGATGGAGGGCTGGCACCAGAAGAATTGAAGCTTGATGGAAACTTTGGTCATCTGGAGAGTTTTGGGCTTCAGCAGTCACTCTTCTCTGCTGTATTAAAGTCACTTCTTTCTGCTGACTTGATCACGTTTGTGTTGAGGATAGTTTTGCTGAAGGGTCACTTCTGG
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| Protein seq | NGGKRRLAVYIHIPPPRHHPSELAFPREAARPLSEPSVGAQSWGADLQGRWQVKYISRFGWRVSTRRIEAQDLDGGLAPEELKLDGNFGHLESFGLQQSLFSAVLKSLLSADLITFVLRIVLLKGHFW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.044133 | 0.046047 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0579400 | RBH | 0.351428 | 0.713704 | 3.249532 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g38480 | SBH | 0.404467 | 0.177789 | 0.394463 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0579400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019280 | RBH | 0.000000 | 2.018046 | 1.183530 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0019490 | RBH | 0.136746 | 0.000000 | 1.660113 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019200 | SBH | 0.0 | 0.504501 | 1.040921 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0018870 | RBH | 0.017188 | 0.014217 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019330 | RBH | 3.377630 | 1.791128 | 0.588477 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0351800 | RBH | 1.9343375 | 0.6439735 | 1.486446 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0019790 | RBH | 0.000000 | 0.091162 | 0.194367 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0364000 | SBH | 0.688953 | 5.671969 | 0.410713 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0019520 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0019740 | RBH | 0.074499 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019240 | RBH | 4.784069 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0018990 | RBH | 0.121403 | 0.0 | 0.119807 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019060 | SBH | 0.054831 | 5.085175 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019180 | SBH | 0.0 | 0.0 | 0.060664 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0019540 | RBH | 0.0 | 10.388853 | 0.0 |
