Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_11g0009260 | OGI:11024680 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr11:8208507-8208770 | ||||||||
| Gene Symbol | PL, PS, Pl, Pl1, Ra*, bhlh13, OsbHLH013, OsbHLH13, Ra, OSB1, Ra1, OsGL3A, GL3A, OsB2, OsMYC7, MYC7, OsPs, Ps, OsHLH1, HLH1 | ||||||||||
| DNA seq | TTACCATACGCACCCTTGGCCGGGACAGAAGGCGTAGGTCATGCAAACGAGGTAGTACAGTTCCGTGTCCCCGAGATCTTCCGGCGACAGCGCAGCGACGGGCCTCCTCGCTCGGTGGCCACACTCGCCGGAGATGAGAGAGTCGTAGAGCTCCCTTAGCTGCTCGCTTCTCTGCAGGACGAGCTCGTCGGCCGTGAGGTTCATGGAGCTCGTGATCTTCCTCGTCTTTATCTCCCCGTTGTAGAAGCCGTCCTTCCAAGTCAT |
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| CDS seq | ATGACTTGGAAGGACGGCTTCTACAACGGGGAGATAAAGACGAGGAAGATCACGAGCTCCATGAACCTCACGGCCGACGAGCTCGTCCTGCAGAGAAGCGAGCAGCTAAGGGAGCTCTACGACTCTCTCATCTCCGGCGAGTGTGGCCACCGAGCGAGGAGGCCCGTCGCTGCGCTGTCGCCGGAAGATCTCGGGGACACGGAACTGTACTACCTCGTTTGCATGACCTACGCCTTCTGTCCCGGCCAAGGGTGCGTATGGTAA |
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| Protein seq | MTWKDGFYNGEIKTRKITSSMNLTADELVLQRSEQLRELYDSLISGECGHRARRPVAALSPEDLGDTELYYLVCMTYAFCPGQGCVW |
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| Function | Anthocyanin regulatory R-S protein [UniProtKB/Swiss-Prot:P13027] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_11g0009260 | OsARC_11g0009260.01 | Chr11 | 8208507 | 8208770 | - | NAM | ||
| CDS seq | ATGACTTGGAAGGACGGCTTCTACAACGGGGAGATAAAGACGAGGAAGATCACGAGCTCCATGAACCTCACGGCCGACGAGCTCGTCCTGCAGAGAAGCGAGCAGCTAAGGGAGCTCTACGACTCTCTCATCTCCGGCGAGTGTGGCCACCGAGCGAGGAGGCCCGTCGCTGCGCTGTCGCCGGAAGATCTCGGGGACACGGAACTGTACTACCTCGTTTGCATGACCTACGCCTTCTGTCCCGGCCAAGGGTGCGTATGGTAA
More
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| Protein seq | MTWKDGFYNGEIKTRKITSSMNLTADELVLQRSEQLRELYDSLISGECGHRARRPVAALSPEDLGDTELYYLVCMTYAFCPGQGCVW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0557800 | SBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g47080 | SBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0557800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0009550 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0009420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0009430 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0022880 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0009300 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0129900 | RBH | 0 | 0.005272 | 0.004259 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0009330 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0132400 | RBH | 0 | 0.0292905 | 0.004514 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0009420 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0009490 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0009390 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0009290 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0009410 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G009520 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0009330 | RBH | 0.0 | 0.0 | 0.358737 |
