Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_11g0008060 OGI:11020990 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr11:6776209-6782650
Gene Symbol -
DNA seq

ATGGCAAACATTGTCCTCAACCCAGGACGTTTCCTTGAAGCTGGACAGCATGTCCAAGATGGGAGCCCTAATCGTCTGCCTAGGGCAGACATCACAGTGCCTGCTCCACAAAAACAACATGAAGCCTACATGCTAGCGGAGATTGAGCCCCAAGTTCATGAAGATGAATGGGATGTTCATAGATTGCAGATTCGAAATCATCTACATAATGAACTAGGTATAATGGTCACTCATTGTTCTCCGCATCCTCTTGGTGTTGGCCTCTTTGCTGTTAGAACCACATTGATTAGAGATACTCTGGTTGCTGCTTTTGGATTCCATTACAATGGAGGGCATGTCGTCAGGTTTGACAATCATGACAAGGGTATTAATTGGAGGGCTGCTCATGCTGATAGAGTTGGTTGGATCATGTTTCTTGGGTACCCCCTAGATTTTCGCTCCACAAGTTATATCTCTAGGGCAGTGGGTCTTTTTGGCAAGCTAGATTACTGGCAGGAGGTTGATGCTATTCCAGGAAGAGTCCTCTTGAGGGCATATTTTGATGATGTTGATTTGGTTCCAAGGAGGATAGTTATTAAACAGTTCCCTAATCAGGGTGGATAGGGTGAATCTTGGACCTTTGGTGTCTTTGTTCTTAACGATGAGTTTGCTGACCTGCAATCTCAAGATGAAGATTTGCCACATGTTGGTGCTCCACCTCCCCCACCTGACCCACCTCACCATCATGGCCCTGCCTGGGATGAGATTAATCATCATCATGGAGATGAAGGTGCTTGGGGAAATTGGGAGCAGCAGGCTAAGAATCAACCTGGTTCCGATCATTCAGGGCTAAGTTCACAGGGTGCTAGTGCAAACTTACAGATTGTTATTGCTGCTAGCACTGATAGTTCTCCTCTATTTACTATTTCTCCTGAGATGCAAGGAAAGATTGATGAATTTGTTCTTAGGATGAAGCTGTTGAAATCTCTTCGGAACAAGACACACATACCTTTGCCTATTCAAAATGCGGCCCCTTTCACTCAACTTCTATACCCCAAGAGGAAAGCTTTGTCTGTTTACTCTCAGTCAGTGGAGCCAGTGGTCAAAAGGGCTAACTTGAATGAATCCTCTTCCTGGGCCATGGAGAAAAGCCTATCTATAGATGTAATACCAAGCACAGAAGGCCCTATCTTGTCCCCAATTCCTCTGGCTATTTTGCCTCCTTCAGGAGTTCACTTGGATTCAGATAAGTTTCTCTTGGCAGGCCCTGAGGTTTCTGTTGGCAGGAATGAGCCAGTTTCTCCGGTTGCTTCAAGCTCTGATGCTCTGATTCTTCCTAAGGCCCCTGTTAAGAAAAGAGATGGTAAAACTATCCTTTTTGATCCAGTCAGGAGACAGAGCTCCAGGTTGAGGGCTTTATCTACAGATGTGGCTGCAGATCCTAGGATGGGGATAGGAAAACCTAGAGGCAAATCTGCAAAGAAACTGAAAGAATTGGCAGGTATTACAAATATTTTATCCTCTGGCAGTATTCTTAAGGAATCTGATTTTGCTTCTGATGTTCATTCTGAAACTGATTCCACTCCATCTGATTGTTCTGTCTCGCTGTTGCAAAAGATGGGAGTCGAGATGTGCGGCCTATCTCTTGAGGAGGTGGCTGAAAGCAAGCTGGGTGGACAGAAGTTGGACTTGGTGCCTAGGCCTGCTGAAGATGAGGAGTAGTTTAAGTTTCTTTATGGCAGTCTACTTTGGAACTAAATCTATGTTAAGTGTGGGTTTTTGTATGAACCTTGTGTAATGACAGTTATTGTTCTCAGCTGGTTTATGTTTTGTAAGGTTGACTGTCATCTGTCCCTATATCAGACTAGCTTTGCTTGTTCTGTCCCCTTCCTACTTTCATTTTTTGGATCATGAATCAACTTCGTAGTTGGAATATTCTTTGTTGGAACATAAGGGGTATGAACTCTATTGAGAAGTGGGATGCTCTTAAGTAGAATATTGACGATAGTAACTATCAAATAGTTTGTCTACAAGAAACTAAAAAGGAAACTGTTGACTCATCTTTTCTTAGGAAAGTTATGCCCAAAAAATTTGACAGTTTTCTTTTTGTCCCATCTCGTGGTGCTTCTGGGGGAATTCTAGTTTGTTGGTGTGATTCCATTTTCAAGGGAACTTTGCTATCCTCCAATAATTTTGCCCTCTGCATAAGCTTTACCTCCAGGCATAACAATGAGAGTTGGTTTCTAGCAGCTATTTATGGTCCTTGCAGAGGTCAAGAAAGAGATGTTTTTGTTAGCTAGTTACAGTCTTTCCAATTGCAACCTTCTGAGGCCTGGATTTTTCTTGGGGATTTTAATTTTTACAGATCTGTTGAGAATAGAAAAAAACCTGGAGCTGATATGAATGACATTTTCATTTTCAATAACATTATCAGTTCTTTGGGTTTAGTTGAAATCCCTTTTAAAGGAAGATCATTTACTTGGAGCAACATGCAAAACAACCCCCTTCTTGAGCAGCTGGATTGGGTTTTCACCTCTAATGACTGGACTCTAAAATATCCCAATACAGTGGTTCTTACTTTGCCTAGAGCTATTTCTGATCATGTGCCTATTGTAATTAAAATAGAATCATCCATCCCAAAAATGTGTTTCGTTTTGAGAATTCTTGGGTTCAGATGGAGGGGTTCTTTGATCTAGTGGCACAAGCTTGGAGACTGGACCCTGTTTTTTTTGACCCAGCTAAATGCATTTCTTTTAAGTTAAAGGTCCTCATAAAGAAGCTGATTTGTTGGAGTAAAGGTTTCTCTAACCTCTTGACTTTTTTTTGACAGGAAACAGTAGGAGAGGCTCCTACTGTGCTATATTAAATATATATAAAAATAAGGTTACAATATTTACAAAGGGACAAAAATTAGGAAAAGTCATCTATCCATGATTGCCAATCTAGTTTGTCTATCTCTTTTGCTCTGTGCATATGCAGAGCAAACTCCTTCAAAAAATCCTCCTTCCATTTTTCAAACCTGTATGGAACATTGTTGAAGATCAGATCATTTCTTCTTGACCAAATATGCCAGCATCCAATCGCTAAAACTTCGAAGAAGAATTTGTGTTGAAAATTCTGTTTGGCTGATGTGATCATGTTCATGAAATCCATAGCCAAATTCCAGGGAATTCCAATCTTTTGCCAGCACAGTTGTGCTGCAGGACAGGAAAAGAAAATGTGGTTCCTATTTTCAGTGATTGCAGAGTTGCAGAGTACACACTCAGGCCCATTTTTAGATAAATGCAACAAAGTGTTAGATTTTTTAGATCTAATTGAGGAACTGAGGGCTCTCTCTCTTTTTGAATGGAATTTCAGAGAAATTGTGAAGAAGCATCTCCTGAAACTTTTTTCAGTTTAGAAGATCTTATTGGAAAACAAGATGTACTAGCAGATGGATGCAACTGGGAGAGGAAAACACTAAATTTTTCCATGCAATGGCAACTGAGAGATTCAGGCACAACTTAATAGCCCAGATTAATAGTAATGGATATGTTTTCTCTGCTCATCATGAGAAAGCCTCTCTTTTATGATGCTTTTCAATCCAGAATGGGTGTTTCAACATTTCCAGGAATGAATTTTGATCTTTCAGTGCTCATTCCTACAAATGCTGACCTGGAAAGCCTAGTTGATCCTTTCTTCACTGTTGAGATGGATGATCTGGTCAAAAGAATTCCAATAGATAAAGCTCCTGGGCTGGATGGTTTCAATGGTTTTTTTTATCAAAAGTTGTTGGCCTATTATTTCCTAGGATTTCTACAGACTTGCTGCACAATTTCATGCTGAGTTGGCTGATCTTCAATGTATTAATTCTTCTTACATCACTCTGGTCCCAAAGAAGGCTAATCCTGAATGTGTAAATGATTTTAGGCCGATCTCCTTGATGAGTATTTGTTTAAAGTTTTTGACAAAACTTATGGCTGACAGGCTCCAAGGAGTTATTAAGAAGGTTGTGCATGAAAACCAGTATGGTTTTATTAAGGGGAGAACAATCCAGCATTATTTAGCCTGGTATTTTGAATATATTCATCAGTGTCAGCAATCAAAGCAAGAAATTCTGATCCTAAAGCTAGACTTTGAAAAGGCTTTTGATACGATAGAACACATTACTATTCTAAGAATAATGGAGCAAATGGGTTTTCCTACCAAATGGTTGAATTGGGTCAGAATGGTTTTTGACTCAGCTAGCTCCTCTATTCTTTTAAATATTGTTCCCGGAAATTTCTTTAAGTGCAGAAGGGGGGTTAGGCAGGGTGATCCTCTCTCTCCTCTGCTTTTTGTTCTTGGTGCTGAGCTTTTACAAGCTATTCTGAATAGAGCAATGATAATTGGTTTGTTAACCAAGCCAATAATTGATCAGGGTGGAGGAGATTTCCCTGTTGTTCAATATGCTGATGATACACTTGTCTTTCTAAAGGCTTCTCAGAGAGAACTTTTTTGTCTCAAGGCTTTACTTAATACTTTTGCTCAGGACACTGGCCTGAAAATTAACTATCATAAGTCAAATATTTATCCTCTGAATGTTCCTGAAGAAAATATAGAGAATTTTTCTCTCCTACTCAGCTGCAAAGTTGGAACCATGCCTTTCACATACTTGGGCCTTCCAATGGGTTCTACACGACCAAGGGTTGTTGACATGGCGCCCCTCGTTGACAGGGTTGAAAGAAGACTTACTACTAGTGCCTCTTTTCTTCCTTATGGTGGGAGATTAACGTTGATCAATTCTGTCTTGTCGGCAATTCCAACTTACTACATGTGCTCTCTTAAGCTCCCAAAGACAGTTATAGAAGCCATTGACACTGCTAGAAGGAATTGCCTTTGGAGAGGTTCGAATACCTTGGTCAGAAGAAGACCATTGGCAGCTTGGGACAAAGTGTGTAGACCAAAGGACAAGGGTGGTTTGGGGGTTATAAATCTATACATCCAAAATGTAGCACTTCTCCTGAAGCATTTACTTAAGTTTTATACCGTTGAAGATCTTCCTTGGGTCAGATTAATATGGTTTTCTTATTATGGAACAAAGGTCTCTCATATGGTTTTCAATAAAGGATCCTTTTGGTGGAGAGATATTATTCAGTTGTCTGATATTTATAGGGCTATTGCTCAGTGCTCCATTCAATCTGGTTCTTCAGTTCTCTTTTGGGATGATTTGTGGAATGGGGATGTAAGAAAGTTGAAGTTCCCTGAACTTTTCTCCCAAACCACGGTGAGGTGGGAATCAGTAAGCTCTTTTGCTAATTTAGTTTTGGAAGATTCTTTCAACCTCCCCCTTAATGCCGAATCATATATTCAGTTCTTGCAATTGCAATCAGAGTTAGACTCTCTAACTTTCGCATCTCTTGGAAAAGGTGATCACTGGTCTTTCGTTTGGAACTCTAGCAATTATTCCTCGAGAATGTTTTACAAATCTAATTTCGCTGGGATTTCTGTTCCAAGACCTGTGGTTTGGATTTGGAAAATCAAATGTGTGAAGAAAATAAAGGTTTTCATGTGGCTGCTTATTTGGGACAGATTGAATACTAGAGACATGATTGATAGAAGGCATTGTGCACCTGTTGATGCAATTCTAACCTGTGGTCTTTGTGCTGGTTCTAGAGAAACTTTATACCACCTTTTCTTTGATTGCCCTTTTAGTAAGCAATGCTGGCAGCATCTTGGCATCAGATGGAATACAAATCTGAATATTTGCCAAATGATGGTCCTTGCAAGAGTCCTCTTCAGGCCAAAGGGCTTTATGGAGATATTTTCTTTGCCTGCTGGCACATATGGAAGCAAAGAAATGCACATGTTTTTCAAGATGTTCGACCTTATTTTAATAGGTGGTTGGTTTCCTTTAAGTCTGAAATTCTTCTACATGTTACGGGCCTGTTTGGTACAGCTCCAACTCCTAAATTTAGCTCTAGGAGTTGGGTCTGGAGTGGAGTTGTGGAGCTGCCTAAACCTAGCTCCACAATTCTAGTTCATTTTGTGAGAGAGCTCCACCCAACTCTACTCCCAGTTTTGGTGGAGCTGAAACTGTTTGGCTGAGCTCCAGCTCCAGGAGGGGTAGAGCTGGAGTTGGAGCTGTGCCAAACAGGCCCGTAGAATGAATGAATCTCTTTCTTCTTACATTCTTAGCTGGTTACAAAGTCTGTAATTTTTATTTTCTGTCTGTTTGTAAATAACTTTTGTTTTCTTTTATAAAATTTAACTACTGGGCAAAGCCCTGGTAGTAATTCCTATAAAAAAACAAGAACATCTTTGCCATAGTATGATTAGAGGAGCCAGAATCCAAATCTGTTTCGTTCTGATGTCCAACAAGAACACCTTGGTCATAGTATGATCAGAGAAATTAAAATCCAAATTTTAATGATTCAAGTTGACAGACATGCATATTTAATAATTTCCTAGCTGATAGTTTGTCCTTGAAGGTTACAGTTTATAG

More
CDS seq

ATGGCAAACATTGTCCTCAACCCAGGACGTTTCCTTGAAGCTGGACAGCATGTCCAAGATGGGAGCCCTAATCGTCTGCCTAGGGCAGACATCACAGTGCCTGCTCCACAAAAACAACATGAAGCCTACATGCTAGCGGAGATTGAGCCCCAAGTTCATGAAGATGAATGGGATGTTCATAGATTGCAGATTCGAAATCATCTACATAATGAACTAGGTATAATGGTCACTCATTGTTCTCCGCATCCTCTTGGTGTTGGCCTCTTTGCTGGTGAATCTTGGACCTTTGGTGTCTTTGTTCTTAACGATGAGTTTGCTGACCTGCAATCTCAAGATGAAGATTTGCCACATGTTGGTGCTCCACCTCCCCCACCTGACCCACCTCACCATCATGGCCCTGCCTGGGATGAGATTAATCATCATCATGGAGATGAAGGTGCTTGGGGAAATTGGGAGCAGCAGGCTAAGAATCAACCTGGTTCCGATCATTCAGGGCTAAGTTCACAGGGTGCTAGTGCAAACTTACAGATTGTTATTGCTGCTAGCACTGATAGTTCTCCTCTATTTACTATTTCTCCTGAGATGCAAGGAAAGATTGATGAATTTGTTCTTAGGATGAAGCTGTTGAAATCTCTTCGGAACAAGACACACATACCTTTGCCTATTCAAAATGCGGCCCCTTTCACTCAACTTCTATACCCCAAGAGGAAAGCTTTGTCTGTTTACTCTCAGTCAGTGGAGCCAGTGGTCAAAAGGGCTAACTTGAATGAATCCTCTTCCTGGGCCATGGAGAAAAGCCTATCTATAGATGTAATACCAAGCACAGAAGGCCCTATCTTGTCCCCAATTCCTCTGGCTATTTTGCCTCCTTCAGGAGTTCACTTGGATTCAGATAAGTTTCTCTTGGCAGGCCCTGAGGTTTCTGTTGGCAGGAATGAGCCAGTTTCTCCGGTTGCTTCAAGCTCTGATGCTCTGATTCTTCCTAAGGCCCCTGTTAAGAAAAGAGATGGTTACAGTTTATAG

More
Protein seq

MANIVLNPGRFLEAGQHVQDGSPNRLPRADITVPAPQKQHEAYMLAEIEPQVHEDEWDVHRLQIRNHLHNELGIMVTHCSPHPLGVGLFAGESWTFGVFVLNDEFADLQSQDEDLPHVGAPPPPPDPPHHHGPAWDEINHHHGDEGAWGNWEQQAKNQPGSDHSGLSSQGASANLQIVIAASTDSSPLFTISPEMQGKIDEFVLRMKLLKSLRNKTHIPLPIQNAAPFTQLLYPKRKALSVYSQSVEPVVKRANLNESSSWAMEKSLSIDVIPSTEGPILSPIPLAILPPSGVHLDSDKFLLAGPEVSVGRNEPVSPVASSSDALILPKAPVKKRDGYSL

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_11g0008060 OsARC_11g0008060.01 Chr11 6776209 6782650 + NAM
CDS seq

ATGGCAAACATTGTCCTCAACCCAGGACGTTTCCTTGAAGCTGGACAGCATGTCCAAGATGGGAGCCCTAATCGTCTGCCTAGGGCAGACATCACAGTGCCTGCTCCACAAAAACAACATGAAGCCTACATGCTAGCGGAGATTGAGCCCCAAGTTCATGAAGATGAATGGGATGTTCATAGATTGCAGATTCGAAATCATCTACATAATGAACTAGGTATAATGGTCACTCATTGTTCTCCGCATCCTCTTGGTGTTGGCCTCTTTGCTGGTGAATCTTGGACCTTTGGTGTCTTTGTTCTTAACGATGAGTTTGCTGACCTGCAATCTCAAGATGAAGATTTGCCACATGTTGGTGCTCCACCTCCCCCACCTGACCCACCTCACCATCATGGCCCTGCCTGGGATGAGATTAATCATCATCATGGAGATGAAGGTGCTTGGGGAAATTGGGAGCAGCAGGCTAAGAATCAACCTGGTTCCGATCATTCAGGGCTAAGTTCACAGGGTGCTAGTGCAAACTTACAGATTGTTATTGCTGCTAGCACTGATAGTTCTCCTCTATTTACTATTTCTCCTGAGATGCAAGGAAAGATTGATGAATTTGTTCTTAGGATGAAGCTGTTGAAATCTCTTCGGAACAAGACACACATACCTTTGCCTATTCAAAATGCGGCCCCTTTCACTCAACTTCTATACCCCAAGAGGAAAGCTTTGTCTGTTTACTCTCAGTCAGTGGAGCCAGTGGTCAAAAGGGCTAACTTGAATGAATCCTCTTCCTGGGCCATGGAGAAAAGCCTATCTATAGATGTAATACCAAGCACAGAAGGCCCTATCTTGTCCCCAATTCCTCTGGCTATTTTGCCTCCTTCAGGAGTTCACTTGGATTCAGATAAGTTTCTCTTGGCAGGCCCTGAGGTTTCTGTTGGCAGGAATGAGCCAGTTTCTCCGGTTGCTTCAAGCTCTGATGCTCTGATTCTTCCTAAGGCCCCTGTTAAGAAAAGAGATGGTTACAGTTTATAG

More
Protein seq

MANIVLNPGRFLEAGQHVQDGSPNRLPRADITVPAPQKQHEAYMLAEIEPQVHEDEWDVHRLQIRNHLHNELGIMVTHCSPHPLGVGLFAGESWTFGVFVLNDEFADLQSQDEDLPHVGAPPPPPDPPHHHGPAWDEINHHHGDEGAWGNWEQQAKNQPGSDHSGLSSQGASANLQIVIAASTDSSPLFTISPEMQGKIDEFVLRMKLLKSLRNKTHIPLPIQNAAPFTQLLYPKRKALSVYSQSVEPVVKRANLNESSSWAMEKSLSIDVIPSTEGPILSPIPLAILPPSGVHLDSDKFLLAGPEVSVGRNEPVSPVASSSDALILPKAPVKKRDGYSL

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0234001 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g12630 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0234001 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0008330 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0008230 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0010990 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0010840 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0108500 RBH 0 0 0.0632635
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0011000 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0115200 RBH 0.0409365 0.018507 0.0958785
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0008210 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0010260 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0008260 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0008150 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0008220 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G010800 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0008160 RBH 0.000000 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.