Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_09g0020170 | OGI:09066090 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr09:23892763-23900256 | ||||||||
| Gene Symbol | MDHAR3, MDHAR, OsMDHAR, OsMDAR3, MDAR3, OsMDHAR3, MDHAR1, OsMDHAR1, - | ||||||||||
| DNA seq | GCTCGCTCGTGCTGGCCCACATATCAGTGTATGCACATAGAGTGGGTGGGAATCTCCATCCGTTTGGGAACACACAACACAACAACTACCACCCCCACTCCGCTCCTTCCTTCCTTCCCGCATTTGGATTTACCCCCAAATCTTCTCCAAGTCCAATCGACCTCATTTCATTCGATTCATCGATCGCTCGGCGCGGCTTAGGGTTTTTGGCGGCAGCGATGGCGTCGGAGAAGCACTTCAAGTACGTCATCCTCGGCGGCGGCGTCGCAGCGGTCTGTGCCCTCTCTCTTTTTTCGCTTGCGCCTCCCAAATTTGCAAATCACCTTCCTTCCGTCCTTCTCGCCCTGCCGCCCTGGGAGGGGAGTAGGCTGCGGGAGTTCACTGCAAGATCGATGTGGGATTCATTCGCTTGGATCCTTTTATTTGATCTTGGTCTGTTCCGGATCTCGTCGAAAGTACGGTTTTTCCTGTTCCTAATTTCTCTCTGAATATTTTGCAGGGATATGCGGCACGGGAGTTCGCCAAGCAGGGTGTTAAGCCAGGGGAGCTCGCCATCATCTCCAAGGAGGCCGTATGCTCTCTTTCTCTCTCACACACATACGCGCGCGCGCGGGTTGACACACAAAATGCTCTCTTCTGCTCTCTCTCTTTCAATAGGTTGTTCAGGTGCTCCATATCCATAACTGTAGTACACCTTCAATCGAGTTAAGATGTCTAGTATGCCAGTTTTTTGTTATCCACAAAGCATAACAATGGCAAATGAGTTGTGCTTATGCAATAGTTGCATACATCAGTATGTTAGTGGCAGGCCTCAACTATTATTTGTTTGCTAATTACTGAATCCACATGTTTGTACTAAATCTTCTGTTGCCTAGGTACTTTTACTTACTGGAACCATACCTGTTCTTGTTGTAAGCCACTTGTTTAAGCATGTCGCAATTAACCAACCTTCAATCTATTGCTGGAATTTTGCCTACAACAATGCTTTGCTAAAAAGAAAAACTTTGTATTATGGAAGTTGCTTCTGAGGGCCAAAAGAAACAATTCTTGTAAAGCCATTTTGGCACAGCAAGAAATAGTCCTAATTTGCCCTTTGCAAGTTCTGTCATTCTGTCAATTTTTACTTGCTTGTTCACCAACACAGCATTGTGTTTCTTATCAAAAGTTCTCTTTCAGGTGGCTCCTTATGAGCGCCCTGCTCTCAGCAAGGGATACCTCTTTCCTCAGAGTAAGTCCTTAACTTACCGTGTTCTGCCTTTTCGTGTCTGACCTGTGCCAGCTCTATGTCACATGTGGATTGATCAATTTGTACGATCAAAGTAACACCATTTGCATTCTCTGCGAATAGATGCTGCAAGACTCCCAGGATTTCATGTGTGTGTCGGCAGTGGAGGAGAGAGGCTTTTGCCCGAATGGTACTCAGAGAAAGGTATTGACTGCCATTTTGCTTTCTGCACCATATCATCTTTTAATGATTTATTTGTCATTGTTGAGGTTAATTACCATCAATTTGAAATTCTTATTTTTGCTCACCTTAGTGGAAATACGTCATGTAATGATTTTTTTTTATTCTAAGCATACTCCTGAATCATGATTGCATCTGTTGGCAGGCATTGAGTTGATCCTGAGCACTGAAATTGTCAAAGCTGATCTTGCCTCCAAGACTTTGACTAGTGCAGTTGGAGCAACCTTTACATATGAGATTTTGATCATTGCAACTGGCTCCTCAGTATGTTGTGAACTGTGAAATTTGTTTAATATCGGCTCATTGCTGTCATTACTATCACTTGTTATTTACATGCTCTTTTTTTATCCGCTTGTCAGGTCATCAAGCTATCAGATTTTGGTACTCAAGGAGCTGATTCCAACAACATTTTATATCTAAGGGAAGTAGATGATGCTGACAAGCTGGTTGCAGCTATCCAAGCAAAGAAGGGTGGAAAGGCAGTTATTGTAGGAGGAGGTTACATTGGTCTAGAACTTAGTGCTGCATTGAAGATCAATGATTTTGATGTCACGATGGTGTTTCCTGAACCTTGGTGCAGTAAGTGTCACCACTCATATTTTCGCTAACCACTGTTCAACTACCTACTACGCATCAGATGAAAAGAATCAGTTTTGCCCATACGATTGACATGCAGTTATGATGTGAAACGAACTTATAGTGGAAACTTTCGTGATGATGGGAATCTGACATTGTAAAATATCTTCTTGTAGTGCCTCGTCTCTTCACTGCTGATATCGCGGCTTTCTATGAGAGTTACTACACTAACAAAGGAGTTAAGATCGTGAAGGGTACAGTAGCTGTTGGTTTTGATGCTGATGCTAATGGTGATGTATGTACATCTTCCAAATCCAAAATAGCTCTGTAGCTCTCAGTGTGAATGCAAATGACTGTCTGCTTTCCATCGGTTCCCTATTTACTAGGTCACAGCAGTTAACCTGAAGAATGGCAGTGTGCTTGAAGCTGATATTGTTGTTGTTGGTGTTGGGGGCAGACCGCTGACTACTCTCTTTAAAGGTCAAGTTGCTGAGGAGAAAGGTGGAATTAAGGTTAGTTTGCTTTTAACCTGTAGGCTTGACCACAGAAGGTGCTAGGGATGTTTCTATCAAAGAAACAGTGTGTAAACAACTGGACGTTTCTTTATCAAAAAACAGCAGCTGTGCATTTGCTATTTTTCTTTTTTGTGCAAGCAACTCGTTTATAGCATTTGGCCCATCTTGATTGCATTCCTTGAAACAATTGAGCATGTGCATTATTGTTTATACCTTAATATCTGGCACGCCCAAAATTGTATGCAGACCGATGCTTTCTTTGAAACAAGTGTTCCTGGAGTCTATGCTGTCGGTGATGTGGCCACCTTCCCCATGAAGATGTACAATGAGTTGAGGAGAGTGGAACATGTTGACCATGCTAGGAAGTCTGCAGAGCAGGCTGTAAAGGTGAGGCCATTCCACTTGTGTTTCTCTGAAATACAGTAGTTGTGACGACTAACACCACATAGTGGCCTGCACTTGGATCTGACTTGATAGTGATCTGAGTTAAGCAATTATTGAATTGCTCGGAAAACCACCAAATGCTTGGTGTTCATGAGTATCCCTGATTAGCATGGTAGAATTTGATCACTGAAAAATTCTTTGCACTGTCATTCAATAATGATTTGAATATATTGCATGCAAGAATAACGTTAAACTGGACGATGTAATGTATTGTCACATGGAATAGAATGATCTAATGCATAGTCATCTGATAATGTATTATGAAATATTGAAATTGCACTAAAGAATAGTGCAAACTTTGTGTTAATTTCTTTGAGTTGTCTTTGCGAGCAGTGAAATGTCAAAACCTTGGAGTTACCAAACCACTTGGAATCCAAAAACTTCGCTTGTGTTGATTCTGATTACCAACAGGCAACAGTTGTGGCTACTTAACTCGGAATAGGGTTATCATATCTTAGCTTGAACCCTGCATCTTTGTTTCAGGCAATCAAGGGAAAAGAGTCCGGCGAGTCCGTTGTGGAGTATGACTATCTGCCATACTTCTACTCCCGGTCATTCGACCTGGGATGGCAATTCTACGGCGACAACGTTGGCGACACCATCCTGTTCGGAGACAGTGACCCGACCTCTGCCAAGCCCAAGTTCGGGTCCTACTGGATCAAGGACGGCAAGGTGTTGGGTGCCTTCCTGGAGGGTGGGTCACCTGATGAGAACAAGGCCATTGCCAAGGTCGCGAAAACTCAGCCGCCCGTTGCCAACATAGAGGAGCTCAAGAAGGAAGGCCTCCAGTTCGCCAGCAAAATATGAGATTTTTGTAGTTTTGATGTACATTTCCACATGGTACTCCCCCTATTGGTTTTCTGATTGTGATGCGTCTGTACTCTGTACTCCTCTTAAATATGGGCACTTGCTATAGCTGCTGAGATTTGAATAAAGAAGTTTTCTACTACAGCCTTTGCCTTTCACGGTTCAAAGCTACTGGTATTGTTTTGTGGAATGGCGGCGGCTGCTGGGCTCTCGCCCAGGCTTGTTGTTACGCCGGGGAGGAGAAGCCACAGCCATGGACGGCGGCGGATGTGCTGCGCCGCGGCGGCGGCGGCGCAGGGGGAGAGGAAGACGACGGTGAGGAGCAAGGAGGGAGACGCGGTGGAGTTGTGCCGGGTGGTGAACGGCATGTGGCAGGTGAGTGGCCCGTCGTGGGGCCGCTACGAGACGCCCGCCGCCGTGGACGCCATGCTCCGGTACGCCGACGGCGGCCTCTCCACCTTCGACATGGCTGACATTTGTAAGCCTCTCCTCCCGCCGCATTCTGGATACCTCGCAGGAAACTGACACGTGGGGCCCACTCGTAGTGACACGTACTGTAGCTGCGTGAAATTTACCCCGTCCGTGCCGCGACGAATCGAGGCCAGTAGCGCCTTATCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTGTGTCATGTCGTCGTCGTCGTCGGCAGCTCGCACCCTCCTCTCGCCGGCGGCGCCTCCTGTCCCGCGCCGCGGCGTGGTGCGTCCCGCGAGGTGCTCCGGGGGCGGCGGCGCGGCGGCGGTGGAGACGGCCGCGTCGGGGGCGAAGGTTTGTACGGTGAGCAACCGCGGGGACTCCCTGGCGATATGCCGGGTGCTCAACGGCATGTGGCAGACCAGCGGCGGGTGGGGCCGCATCGACCGCGACGCCGCGGTGGACGCCATGCTCGCCTACGCTGACGCCGGCCTCTCCACCTTCGACATGGCCGACCACTGTATCAATCTGCCCCTCTTTACCTCTAATCACTCTAAACCCTATCGTCGGCATTTGTGCGAACACGTAGCGTGCGTAACATTGTTGCTGGTACTATGCATCTACTAGGTGCTATGCATCTGTTGGTGGCACTTAGTTGTTGCTCAATTGATGCCCATAAGCTGTACACCTGTCCCACGGTTATGAGTTGATGCTATTCGATTGAAATCGGGAAATGGTTTTGTTTCACTTTGAAAAAAAGTTTGCTTCAAAAAAAAAAAAGTTCATGTCTCTAGCTATGTTCAGTTCAGAAAAGGTTCATGTTTCATTGACGTATTTAGCTGCACGGCGTAGCAAGTGTAAATATATGAGAGTTGACACTAATAAGAATAAATCAATCTTTCTCCTAATATTTAATCTAGGAGCACTGAGCATGGTATCAACTTGATTTTAAGGCATGGTTACTGTTTTGGCAGATGGACCAGCAGAGGATTTGTATGGCCTTTTCATCAATAGAGTTCGGCGTGAGCGGCCACCTGAGTTGCTTGAAGAAATCAAGGGGTGAGAGCGATTTACCATGGTCTTTATGCCACTCGGAGGTGTGTATAGCTGTTTTTCCGCTGCTTCTAATTGTTATTTTATTAATCTCCGCAGGCTAACAAAGTGGGTACCACCTCCGGTTAAAATGACCAGAAGTTATGTTGAGGATAATATTAACAGATCTCGAAAGAGAATGGATGTTTCTGCCTTGGACATGCTGCAGTTCCATTGGTATGTTTCTGTGGATTTGTGTGCTACTTATTAGTTATAGTAACATTTGGATGCCATTTGGTTTATTGCTCAGTTTTATTACATTTACTGCTAATCGCAAATTAACTACATTCTTAGAATGTTGAACTGTTTTGTTGCTAAACAATAAGGAACCTCCTGTCTCAAGTGACTTTTATATCACAGTTTCTTGTACGTTTGCACAATCAAGTTTCTGGTGATCTATCATCCAGAAAAGATTGTGTCCTTCCATTGACCATTGCTCTTAGCTTCGTAGTTATGCTGCAGTAGAGACCAGTTTAGAGTACTACAGATTTTTAGTTTTGAGTGTACTGTGGAAAGTCCTAAACTTGAGAGGTGTTATGATAAAAACCTGCGGTATGTGTAATCAGTCGAGGAAATGCAGCAATGTTTTATACTATAACTACTGCCATAATTTGTAATTCAGCTGACCTTTTATCATAATATAGGTGGGATTATGCAAACCCTGGATATCTGGATGCACTAAAACACATCACAGACCTAAAGGAGGAAGGTAGTATTTTGAACTTGGATCAGATTTTTAGTCTACTTATGTGTTTCCTTTCGCATGTCATGGTTTTTCAGTACTGACGGATTCTCGCTTCATGCCTTGTTTTGTTATGTACAATGTGAAGGTAAGATAAAGACAGTAGCTCTGACAAACTTCGATACAGACAGGCTGCAGATAATTCTAGAAAATGGTATCCCAATTGTCAGCAACCAGGTATATTTTCACCTAACCCTTATGGTATATTTGCCTTTTATTTGTGTTAACTATCATATGGTCCACTCAATGAAGTGAGGGATGTTGTAATTGCCAGGTTCAACATTCTATTGTTGACATGCGTCCGCAGCGAAGAATGGCAGAACTTTGCCAGCTTACTGGAGTAAAACTTATAACGTCTACTCCTAACCCCATGTCCCCTCTCCCTGTTTTGGCATAACACATAGTTTTAATGCAGTATTACTGATGCAGGTATGGCACAGTTATGGGTGGTCTGCTGTCTGAGAAGTTTCTTGACACCAATGTATCTATACCTTTTGCTGGACCTCCTCTGAATACCCCATCTTTGCAGAAGTATAAGCGGGTGAGCATTTTGTATATCCTATGTTTGAACGAGTTACCTCCTTCCCAATTCTTGCTATTCTCATTGTTGAAGCTGTGACAGATGGTGGATGCCTGGGGTGGCTGGAGCCTGTTCCAGGCTTTGCTTCAGACGTTGAAGAAAGTATCATTGAAGCATGGTGTTTCTATATCAACTGTTGCTGTGAGATACATACTGAACCAGGTATACATCCATTCAATTTATCTTGAGATTTGTCTTTTTCTTATATATATATAAAATAGTATCAGTGAAGCATTTGCCATAACTAACATGTGACCTTTGTCATTTTGGTTGTTTATGGGAATAGACATCTGTTGCGGGTTCAATGGTGGGTGTGAGACTGGGACTCTCTGAACACATAAAAGACACCAACGCCATCTTCTCGCTTGAATTAGATGAAGAGGACATGAACAGCATCACTGAAGCATCGAATAAGGGAAGAAATCTTATGGATATAATAGGCGATTGTGGAGACGAATACAGAGCATAATTGTGCAGAGAGATAAAGAGAGAGAGAGGCAGAGGGGGTAGACCAATGAGGCGTGTGCCTGCCAGTTTTCTGGAGTTCTGAAATCTGATCTGTTTTGTCATGAACGTAGTGTGCAGCAGCTATCTGATCTTCCAGTATACTACTACTCCAGATCAGTGTGTAAACCAACCTCCCAAAAGAAAGTGGCATTTTATAAGAACTGTACATACACAAGACAGATTATAATTTGATATGCCCATTAATACGGATTCGATTTGCGCAGTTAGCCAATTAAGGAGTGTCGCATATGCTTTGGTTGGTCATGTCCAGGGGGAGGCACTGCACTATTTCATCAGCAATCATCCACGGAAAGTGGTGGTGACAGAC
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| CDS seq | ATGGCGTCGGAGAAGCACTTCAAGTACGTCATCCTCGGCGGCGGCGTCGCAGCGGGATATGCGGCACGGGAGTTCGCCAAGCAGGGTGTTAAGCCAGGGGAGCTCGCCATCATCTCCAAGGAGGCCGTACTTTTACTTACTGGAACCATACCTGTTCTTGTTGTGGCTCCTTATGAGCGCCCTGCTCTCAGCAAGGGATACCTCTTTCCTCAGAATGCTGCAAGACTCCCAGGATTTCATGTGTGTGTCGGCAGTGGAGGAGAGAGGCTTTTGCCCGAATGGTACTCAGAGAAAGGCATTGAGTTGATCCTGAGCACTGAAATTGTCAAAGCTGATCTTGCCTCCAAGACTTTGACTAGTGCAGTTGGAGCAACCTTTACATATGAGATTTTGATCATTGCAACTGGCTCCTCAGTCATCAAGCTATCAGATTTTGGTACTCAAGGAGCTGATTCCAACAACATTTTATATCTAAGGGAAGTAGATGATGCTGACAAGCTGGTTGCAGCTATCCAAGCAAAGAAGGGTGGAAAGGCAGTTATTGTAGGAGGAGGTTACATTGGTCTAGAACTTAGTGCTGCATTGAAGATCAATGATTTTGATGTCACGATGGTGTTTCCTGAACCTTGGTGCATGCCTCGTCTCTTCACTGCTGATATCGCGGCTTTCTATGAGAGTTACTACACTAACAAAGGAGTTAAGATCGTGAAGGGTACAGTAGCTGTTGGTTTTGATGCTGATGCTAATGGTGATGTCACAGCAGTTAACCTGAAGAATGGCAGTGTGCTTGAAGCTGATATTGTTGTTGTTGGTGTTGGGGGCAGACCGCTGACTACTCTCTTTAAAGGTCAAGTTGCTGAGGAGAAAGGTGGAATTAAGACCGATGCTTTCTTTGAAACAAGTGTTCCTGGAGTCTATGCTGTCGGTGATGTGGCCACCTTCCCCATGAAGATGTACAATGAGTTGAGGAGAGTGGAACATGTTGACCATGCTAGGAAGTCTGCAGAGCAGGCTGTAAAGGCAATCAAGGGAAAAGAGTCCGGCGAGTCCGTTGTGGAGTATGACTATCTGCCATACTTCTACTCCCGGTCATTCGACCTGGGATGGCAATTCTACGGCGACAACGTTGGCGACACCATCCTGTTCGGAGACAGTGACCCGACCTCTGCCAAGCCCAAGTTCGGGTCCTACTGGATCAAGGACGGCAAGGTGTTGGGTGCCTTCCTGGAGGGTGGGTCACCTGATGAGAACAAGGCCATTGCCAAGGTCGCGAAAACTCAGCCGCCCGTTGCCAACATAGAGGAGCTCAAGAAGGAAGGCCTCCACCTTTGCCTTTCACGGTTCAAAGCTACTGGTATTGTTTTGTGGAATGGCGGCGGCTGCTGGGCTCTCGCCCAGGCTTGTTGTTACGCCGGGGAGGAGAAGCCACAGCCATGGACGGCGGCGGATGTGCTGCGCCGCGGCGGCGGCGGCGCAGGGGGAGAGGAAGACGACGGTGAGGAGCAAGGAGGGAGACGCGGTGGAGTTGTGCCGGGTGGTGAACGGCATGTGGCAGCTCGCACCCTCCTCTCGCCGGCGGCGCCTCCTGTCCCGCGCCGCGGCGTGGTGCGTCCCGCGAGGTGCTCCGGGGGCGGCGGCGCGGCGGCGGTGGAGACGGCCGCGTCGGGGGCGAAGGTTTGTACGGTGAGCAACCGCGGGGACTCCCTGGCGATATGCCGGGTGCTCAACGGCATGTGGCAGACCAGCGGCGGGTGGGGCCGCATCGACCGCGACGCCGCGGTGGACGCCATGCTCGCCTACGCTGACGCCGGCCTCTCCACCTTCGACATGGCCGACCACTATGGACCAGCAGAGGATTTGTATGGCCTTTTCATCAATAGAGTTCGGCGTGAGCGGCCACCTGAGTTGCTTGAAGAAATCAAGGGGCTAACAAAGTGGGTACCACCTCCGGTTAAAATGACCAGAAGTTATGTTGAGGATAATATTAACAGATCTCGAAAGAGAATGGATGTTTCTGCCTTGGACATGCTGCAGTTCCATTGGTGGGATTATGCAAACCCTGGATATCTGGATGCACTAAAACACATCACAGACCTAAAGGAGGAAGGTAAGATAAAGACAGTAGCTCTGACAAACTTCGATACAGACAGGCTGCAGATAATTCTAGAAAATGGTATCCCAATTGTCAGCAACCAGATGGTGGATGCCTGGGGTGGCTGGAGCCTGTTCCAGGCTTTGCTTCAGACGTTGAAGAAAGTATCATTGAAGCATGGTGTTTCTATATCAACTGTTGCTGTGAGATACATACTGAACCAGACATCTGTTGCGGGTTCAATGGTGGGTGTGAGACTGGGACTCTCTGAACACATAAAAGACACCAACGCCATCTTCTCGCTTGAATTAGATGAAGAGGACATGAACAGCATCACTGAAGCATCGAATAAGGGAAGAAATCTTATGGATATAATAGGCGATTGTGGAGACGAATACAGAGCATAA
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| Protein seq | MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVLLLTGTIPVLVVAPYERPALSKGYLFPQNAARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILIIATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQAKKGGKAVIVGGGYIGLELSAALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVATFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFYGDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVANIEELKKEGLHLCLSRFKATGIVLWNGGGCWALAQACCYAGEEKPQPWTAADVLRRGGGGAGGEEDDGEEQGGRRGGVVPGGERHVAARTLLSPAAPPVPRRGVVRPARCSGGGGAAAVETAASGAKVCTVSNRGDSLAICRVLNGMWQTSGGWGRIDRDAAVDAMLAYADAGLSTFDMADHYGPAEDLYGLFINRVRRERPPELLEEIKGLTKWVPPPVKMTRSYVEDNINRSRKRMDVSALDMLQFHWWDYANPGYLDALKHITDLKEEGKIKTVALTNFDTDRLQIILENGIPIVSNQMVDAWGGWSLFQALLQTLKKVSLKHGVSISTVAVRYILNQTSVAGSMVGVRLGLSEHIKDTNAIFSLELDEEDMNSITEASNKGRNLMDIIGDCGDEYRA |
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| Function | Monodehydroascorbate reductase 3, cytosolic [UniProtKB/Swiss-Prot:Q652L6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_09g0020170 | OsARC_09g0020170.01 | Chr09 | 23892763 | 23900256 | + | NAM | ||
| CDS seq | ATGGCGTCGGAGAAGCACTTCAAGTACGTCATCCTCGGCGGCGGCGTCGCAGCGGGATATGCGGCACGGGAGTTCGCCAAGCAGGGTGTTAAGCCAGGGGAGCTCGCCATCATCTCCAAGGAGGCCGTACTTTTACTTACTGGAACCATACCTGTTCTTGTTGTGGCTCCTTATGAGCGCCCTGCTCTCAGCAAGGGATACCTCTTTCCTCAGAATGCTGCAAGACTCCCAGGATTTCATGTGTGTGTCGGCAGTGGAGGAGAGAGGCTTTTGCCCGAATGGTACTCAGAGAAAGGCATTGAGTTGATCCTGAGCACTGAAATTGTCAAAGCTGATCTTGCCTCCAAGACTTTGACTAGTGCAGTTGGAGCAACCTTTACATATGAGATTTTGATCATTGCAACTGGCTCCTCAGTCATCAAGCTATCAGATTTTGGTACTCAAGGAGCTGATTCCAACAACATTTTATATCTAAGGGAAGTAGATGATGCTGACAAGCTGGTTGCAGCTATCCAAGCAAAGAAGGGTGGAAAGGCAGTTATTGTAGGAGGAGGTTACATTGGTCTAGAACTTAGTGCTGCATTGAAGATCAATGATTTTGATGTCACGATGGTGTTTCCTGAACCTTGGTGCATGCCTCGTCTCTTCACTGCTGATATCGCGGCTTTCTATGAGAGTTACTACACTAACAAAGGAGTTAAGATCGTGAAGGGTACAGTAGCTGTTGGTTTTGATGCTGATGCTAATGGTGATGTCACAGCAGTTAACCTGAAGAATGGCAGTGTGCTTGAAGCTGATATTGTTGTTGTTGGTGTTGGGGGCAGACCGCTGACTACTCTCTTTAAAGGTCAAGTTGCTGAGGAGAAAGGTGGAATTAAGACCGATGCTTTCTTTGAAACAAGTGTTCCTGGAGTCTATGCTGTCGGTGATGTGGCCACCTTCCCCATGAAGATGTACAATGAGTTGAGGAGAGTGGAACATGTTGACCATGCTAGGAAGTCTGCAGAGCAGGCTGTAAAGGCAATCAAGGGAAAAGAGTCCGGCGAGTCCGTTGTGGAGTATGACTATCTGCCATACTTCTACTCCCGGTCATTCGACCTGGGATGGCAATTCTACGGCGACAACGTTGGCGACACCATCCTGTTCGGAGACAGTGACCCGACCTCTGCCAAGCCCAAGTTCGGGTCCTACTGGATCAAGGACGGCAAGGTGTTGGGTGCCTTCCTGGAGGGTGGGTCACCTGATGAGAACAAGGCCATTGCCAAGGTCGCGAAAACTCAGCCGCCCGTTGCCAACATAGAGGAGCTCAAGAAGGAAGGCCTCCACCTTTGCCTTTCACGGTTCAAAGCTACTGGTATTGTTTTGTGGAATGGCGGCGGCTGCTGGGCTCTCGCCCAGGCTTGTTGTTACGCCGGGGAGGAGAAGCCACAGCCATGGACGGCGGCGGATGTGCTGCGCCGCGGCGGCGGCGGCGCAGGGGGAGAGGAAGACGACGGTGAGGAGCAAGGAGGGAGACGCGGTGGAGTTGTGCCGGGTGGTGAACGGCATGTGGCAGCTCGCACCCTCCTCTCGCCGGCGGCGCCTCCTGTCCCGCGCCGCGGCGTGGTGCGTCCCGCGAGGTGCTCCGGGGGCGGCGGCGCGGCGGCGGTGGAGACGGCCGCGTCGGGGGCGAAGGTTTGTACGGTGAGCAACCGCGGGGACTCCCTGGCGATATGCCGGGTGCTCAACGGCATGTGGCAGACCAGCGGCGGGTGGGGCCGCATCGACCGCGACGCCGCGGTGGACGCCATGCTCGCCTACGCTGACGCCGGCCTCTCCACCTTCGACATGGCCGACCACTATGGACCAGCAGAGGATTTGTATGGCCTTTTCATCAATAGAGTTCGGCGTGAGCGGCCACCTGAGTTGCTTGAAGAAATCAAGGGGCTAACAAAGTGGGTACCACCTCCGGTTAAAATGACCAGAAGTTATGTTGAGGATAATATTAACAGATCTCGAAAGAGAATGGATGTTTCTGCCTTGGACATGCTGCAGTTCCATTGGTGGGATTATGCAAACCCTGGATATCTGGATGCACTAAAACACATCACAGACCTAAAGGAGGAAGGTAAGATAAAGACAGTAGCTCTGACAAACTTCGATACAGACAGGCTGCAGATAATTCTAGAAAATGGTATCCCAATTGTCAGCAACCAGATGGTGGATGCCTGGGGTGGCTGGAGCCTGTTCCAGGCTTTGCTTCAGACGTTGAAGAAAGTATCATTGAAGCATGGTGTTTCTATATCAACTGTTGCTGTGAGATACATACTGAACCAGACATCTGTTGCGGGTTCAATGGTGGGTGTGAGACTGGGACTCTCTGAACACATAAAAGACACCAACGCCATCTTCTCGCTTGAATTAGATGAAGAGGACATGAACAGCATCACTGAAGCATCGAATAAGGGAAGAAATCTTATGGATATAATAGGCGATTGTGGAGACGAATACAGAGCATAA
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| Protein seq | MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVLLLTGTIPVLVVAPYERPALSKGYLFPQNAARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILIIATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQAKKGGKAVIVGGGYIGLELSAALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVATFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFYGDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVANIEELKKEGLHLCLSRFKATGIVLWNGGGCWALAQACCYAGEEKPQPWTAADVLRRGGGGAGGEEDDGEEQGGRRGGVVPGGERHVAARTLLSPAAPPVPRRGVVRPARCSGGGGAAAVETAASGAKVCTVSNRGDSLAICRVLNGMWQTSGGWGRIDRDAAVDAMLAYADAGLSTFDMADHYGPAEDLYGLFINRVRRERPPELLEEIKGLTKWVPPPVKMTRSYVEDNINRSRKRMDVSALDMLQFHWWDYANPGYLDALKHITDLKEEGKIKTVALTNFDTDRLQIILENGIPIVSNQMVDAWGGWSLFQALLQTLKKVSLKHGVSISTVAVRYILNQTSVAGSMVGVRLGLSEHIKDTNAIFSLELDEEDMNSITEASNKGRNLMDIIGDCGDEYRA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_09g0020170 | OsARC_09g0020170.02 | Chr09 | 23897167 | 23900137 | + | IsoSeq | ||
| CDS seq | AGGCCAGTAGCGCCTTATCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTGTGTCATGTCGTCGTCGTCGTCGGCAGCTCGCACCCTCCTCTCGCCGGCGGCGCCTCCTGTCCCGCGCCGCGGCGTGGTGCGTCCCGCGAGGTGCTCCGGGGGCGGCGGCGCGGCGGCGGTGGAGACGGCCGCGTCGGGGGCGAAGGTTTGTA
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| Protein seq | RPVAPYLPPSLSLSLSVSCRRRRRQLAPSSRRRRLLSRAAAWCVPRGAPGAAARRRWRRPRRGRRFV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.173568 | 1.315549 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0567300 | RBH | 20.325266 | 21.037533 | 39.729240 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g39380 | RBH | 13.290387 | 13.900414 | 10.352654 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0567300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0020150 | RBH | 8.086503 | 48.642677 | 29.089291 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0020200 | RBH | 5.070714 | 7.374405 | 17.584330 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0020410 | RBH | 14.563416 | 38.066093 | 42.438160 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0025240 | RBH | 0.467339 | 1.628390 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0020400 | RBH | 208.431412 | 124.024315 | 128.659576 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0382700 | RBH | 82.9764515 | 41.65432 | 57.3740635 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0020180 | RBH | 4.669460 | 3.035095 | 8.587066 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0372200 | RBH | 109.192112 | 20.884798 | 44.747446 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0020240 | RBH | 4.358710 | 0.280935 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0019980 | RBH | 14.224395 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0019990 | RBH | 117.684631 | 50.873055 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0020020 | RBH | 9.344511 | 0.0 | 10.429649 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0020160 | RBH | 7.441263 | 39.135170 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G020570 | RBH | 4.359631 | 11.491532 | 14.582479 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0020320 | RBH | 18.205366 | 36.958160 | 59.808994 |
